Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0009G001 Amborella trichopoda HOM05D004447 ORTHO05D005973 1.2e-124 449.9 232 100.0
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 8.1e-65 251.1 342 47.1
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 7.2e-21 105.1 243 32.5
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 2.7e-20 103.2 54 75.9
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 1.8e-19 100.5 54 74.1
TAR636G2291 Trochodendron aralioides HOM05D004447 ORTHO05D005973 1.8e-19 100.5 239 33.1
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 3.0e-19 99.8 236 36.0
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 5.1e-19 99.0 104 52.9
ClCG08G000100 Citrullus lanatus HOM05D004447 ORTHO05D005973 5.1e-19 99.0 54 72.2
Hma1.2p1_0571F.1_g180890 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 5.1e-19 99.0 54 72.2
Hma1.2p1_0571F.1_g180900 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 5.1e-19 99.0 54 72.2
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 6.7e-19 98.6 210 34.8
vmacro17434 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 6.7e-19 98.6 200 37.5
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 8.8e-19 98.2 220 35.5
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 1.1e-18 97.8 236 35.2
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 1.1e-18 97.8 54 75.9
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.1e-18 97.8 103 50.5
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 1.1e-18 97.8 54 72.2
CsaV3_6G052450 Cucumis sativus L. HOM05D004447 ORTHO05D005973 1.1e-18 97.8 54 72.2
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 1.1e-18 97.8 54 72.2
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 1.1e-18 97.8 54 74.1
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.9e-18 97.1 242 34.3
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 2.5e-18 96.7 54 68.5
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 2.5e-18 96.7 54 72.2
COL.COLO4_24890 Corchorus olitorius HOM05D004447 ORTHO05D005973 2.5e-18 96.7 54 74.1
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 2.5e-18 96.7 225 32.4
Actinidia26436 Actinidia chinensis HOM05D004447 ORTHO05D005973 5.7e-18 95.5 251 35.5
Ciclev10005880m.g Citrus clementina HOM05D004447 ORTHO05D005973 5.7e-18 95.5 177 35.6
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 5.7e-18 95.5 54 70.4
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 7.4e-18 95.1 55 70.9
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 7.4e-18 95.1 175 38.3
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 9.7e-18 94.7 87 54.0
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 9.7e-18 94.7 54 68.5
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 9.7e-18 94.7 248 33.1
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 2.2e-17 93.6 112 44.6
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 2.2e-17 93.6 54 72.2
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 2.2e-17 93.6 228 34.6
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 2.8e-17 93.2 238 33.6
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 3.7e-17 92.8 54 70.4
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 4.8e-17 92.4 54 70.4
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 6.3e-17 92.0 242 31.8
Nn2g15474 Nelumbo nucifera HOM05D004447 ORTHO05D005973 6.3e-17 92.0 227 32.2
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 6.3e-17 92.0 54 68.5
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 8.2e-17 91.7 54 68.5
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 8.2e-17 91.7 55 69.1
PSO455G0096 Papaver somniferum HOM05D004447 ORTHO05D005973 8.2e-17 91.7 54 64.8
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 1.1e-16 91.3 99 48.5
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 1.4e-16 90.9 253 31.2
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 1.8e-16 90.5 112 44.6
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 2.4e-16 90.1 169 34.3
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 3.1e-16 89.7 54 68.5
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 3.1e-16 89.7 201 33.3
Zm00001eb278360 Zea mays HOM05D004447 ORTHO05D005973 3.1e-16 89.7 54 66.7
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 4.1e-16 89.4 254 33.9
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 4.1e-16 89.4 118 41.5
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 4.1e-16 89.4 170 36.5
SHI27486 Sapria himalayana HOM05D004447 ORTHO05D005973 4.1e-16 89.4 54 68.5
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 5.3e-16 89.0 93 49.5
HPP92_009576 Vanilla planifolia HOM05D004447 ORTHO05D005973 5.3e-16 89.0 54 64.8
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 5.3e-16 89.0 54 66.7
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 6.9e-16 88.6 54 61.1
Peaxi162Scf00862g00001 Petunia axillaris HOM05D004447 ORTHO05D005973 6.9e-16 88.6 244 32.8
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 9.1e-16 88.2 140 42.9
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 9.1e-16 88.2 90 50.0
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 9.1e-16 88.2 117 44.4
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.2e-15 87.8 55 63.6
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 1.2e-15 87.8 52 59.6
PGSC0003DMG401012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 1.2e-15 87.8 236 32.6
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.5e-15 87.4 55 63.6
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 1.5e-15 87.4 115 45.2
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 1.5e-15 87.4 115 45.2
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 1.5e-15 87.4 153 34.6
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 1.5e-15 87.4 54 64.8
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 1.5e-15 87.4 113 42.5
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 2.0e-15 87.0 257 32.3
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 2.6e-15 86.7 54 61.1
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 3.4e-15 86.3 153 34.6
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 4.5e-15 85.9 55 69.1
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 4.5e-15 85.9 163 35.6
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 5.9e-15 85.5 171 35.7
AL7G41290 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.0e-14 84.7 56 60.7
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 1.0e-14 84.7 258 29.8
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 1.7e-14 84.0 235 31.9
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 2.2e-14 83.6 43 72.1
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 2.2e-14 83.6 229 31.9
CDE05G2287 Ceratophyllum demersum HOM05D004447 ORTHO05D005973 2.9e-14 83.2 223 31.4
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 2.9e-14 83.2 55 63.6
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 3.8e-14 82.8 251 32.3
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 3.8e-14 82.8 251 32.3
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 3.8e-14 82.8 44 70.5
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 8.5e-14 81.6 62 53.2
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 8.5e-14 81.6 231 30.3
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 1.1e-13 81.3 62 51.6
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 1.1e-13 81.3 236 32.6
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 2.5e-13 80.1 153 34.6
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 4.2e-13 79.3 206 30.1
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 9.4e-13 78.2 55 60.0
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 9.4e-13 78.2 233 30.9
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 1.6e-12 77.4 57 56.1
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 1.6e-12 77.4 57 56.1
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 1.6e-12 77.4 57 56.1
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.1e-12 77.0 40 70.0
FAN03G1122 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.7e-12 76.6 55 54.5
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 3.6e-12 76.3 44 65.9
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 6.1e-12 75.5 55 54.5
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.0e-11 74.7 89 44.9
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 1.4e-11 74.3 52 57.7
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.1e-10 71.2 55 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 2.6e-10 70.1 55 54.5
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 2.6e-10 70.1 57 52.6
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 7.4e-10 68.6 125 36.0
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 6.3e-09 65.5 55 45.5
AagrBONN_evm.TU.Sc2ySwM_362.493 Anthoceros agrestis HOM05D004447 ORTHO05D005973 7.0e-08 62.0 49 51.0
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 1.5e-07 60.8 54 53.7
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 7.7e-07 58.5 27 77.8
MCO08G197 Micromonas commoda HOM05D004447 ORTHO05D005973 1.0e-06 58.2 49 53.1
Cre10.g455600 Chlamydomonas reinhardtii HOM05D004447 ORTHO05D005973 1.7e-06 57.4 53 50.9
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 3.8e-06 56.2 200 31.0
CSS0002798 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 6.5e-06 55.5 27 74.1


User provided reference genes

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