Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 1.5e-167 592.8 309 100.0
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 8.0e-161 570.5 309 95.8
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 3.1e-152 542.0 309 89.3
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 3.9e-147 525.0 313 86.3
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 1.2e-143 513.5 315 86.3
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 1.5e-143 513.1 310 86.1
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 2.8e-137 492.3 309 82.5
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 6.2e-137 491.1 309 82.2
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 1.5e-135 486.5 309 82.8
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 9.9e-135 483.8 309 82.2
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 6.4e-134 481.1 315 82.2
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 4.7e-129 464.9 315 79.4
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 2.1e-124 449.5 309 78.3
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 6.6e-123 444.5 316 74.1
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 1.8e-104 383.3 317 69.7
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 2.9e-102 375.9 326 65.0
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 6.5e-102 374.8 317 64.7
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 9.3e-101 370.9 327 64.5
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 6.0e-100 368.2 242 76.4
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.0e-100 368.2 319 64.3
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 6.0e-100 368.2 320 61.9
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 7.4e-98 361.3 237 77.2
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 9.6e-98 360.9 314 65.3
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 2.8e-97 359.4 313 65.5
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 6.2e-97 358.2 255 72.5
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 8.2e-97 357.8 235 81.3
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 1.4e-96 357.1 301 63.1
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 1.4e-96 357.1 301 63.1
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 2.4e-96 356.3 311 67.8
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 5.3e-96 355.1 314 61.5
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 2.0e-95 353.2 319 60.8
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 3.4e-95 352.4 310 62.9
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 3.4e-95 352.4 310 63.2
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 4.5e-95 352.1 291 64.3
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 5.8e-95 351.7 241 72.6
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 5.8e-95 351.7 242 73.1
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 5.8e-95 351.7 243 74.9
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 5.8e-95 351.7 288 62.5
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 7.6e-95 351.3 242 71.5
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 1.3e-94 350.5 243 71.2
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 1.3e-94 350.5 243 72.4
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 1.7e-94 350.1 256 69.9
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 2.2e-94 349.7 243 71.6
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 2.9e-94 349.4 287 62.0
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 2.9e-94 349.4 288 61.8
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 4.2e-93 345.5 244 70.1
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 4.2e-93 345.5 314 59.9
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 4.2e-93 345.5 270 66.7
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 9.3e-93 344.4 295 63.4
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 2.1e-92 343.2 237 72.6
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 6.1e-92 341.7 241 70.5
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 1.8e-91 340.1 314 58.3
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 3.0e-91 339.3 328 60.7
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 5.1e-91 338.6 232 73.3
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 5.1e-91 338.6 291 62.2
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 8.7e-91 337.8 228 74.6
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.5e-90 336.3 239 69.9
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 3.3e-90 335.9 239 69.9
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 4.3e-90 335.5 264 65.9
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 7.4e-90 334.7 277 64.6
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 7.4e-90 334.7 295 62.4
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 1.3e-89 334.0 243 69.5
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 1.3e-89 334.0 240 69.2
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 1.6e-89 333.6 233 70.4
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 3.7e-89 332.4 232 70.3
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.8e-89 332.0 268 63.4
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 4.8e-89 332.0 229 71.6
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 8.2e-89 331.3 244 69.7
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 1.1e-88 330.9 304 58.9
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.4e-88 330.5 241 72.2
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 1.4e-88 330.5 240 70.8
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 5.3e-88 328.6 311 59.2
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 5.3e-88 328.6 248 68.1
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 6.9e-88 328.2 280 63.2
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 9.0e-88 327.8 314 59.2
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 2.0e-87 326.6 235 75.7
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 2.6e-87 326.2 242 66.9
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 3.4e-87 325.9 271 62.4
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 3.4e-87 325.9 246 69.1
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 4.5e-87 325.5 240 67.5
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 5.9e-87 325.1 309 57.9
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 7.7e-87 324.7 229 70.3
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 1.0e-86 324.3 245 69.0
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 8.5e-86 321.2 235 75.3
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 8.5e-86 321.2 295 60.0
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 1.1e-85 320.9 225 70.7
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 1.4e-85 320.5 239 70.3
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 4.2e-85 318.9 250 65.2
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 7.2e-85 318.2 274 60.6
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 1.4e-83 313.9 209 79.4
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 2.3e-83 313.2 225 69.3
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.0e-83 312.8 245 68.2
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 2.5e-82 309.7 206 82.5
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 2.5e-82 309.7 206 82.5
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.3e-82 309.3 295 55.6
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 4.8e-81 305.4 227 65.6
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 1.8e-80 303.5 228 69.7
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 2.4e-80 303.1 298 57.4
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 3.1e-80 302.8 310 53.9
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 1.1e-77 294.3 252 62.7
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 1.4e-77 293.9 309 53.4
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 2.5e-77 293.1 311 53.1
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 5.5e-77 292.0 278 62.2
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.2e-76 290.8 226 66.4
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 1.3e-73 280.8 216 64.8
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 8.2e-73 278.1 214 66.4
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 9.1e-72 274.6 241 59.3
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 3.8e-70 269.2 280 51.1
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 3.2e-69 266.2 232 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 2.7e-63 246.5 284 49.6
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 2.5e-61 240.0 241 53.9
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 5.5e-61 238.8 219 55.3
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 9.4e-61 238.0 216 62.5
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 9.4e-61 238.0 215 58.6
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.1e-60 236.9 215 58.1
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 1.7e-57 227.3 185 63.8
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 2.8e-57 226.5 238 55.5
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 5.4e-56 222.2 218 52.3
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 3.5e-55 219.5 170 65.3
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.2e-52 211.1 206 54.9
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 8.3e-49 198.4 173 60.1
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 1.8e-43 180.6 154 66.2
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 1.4e-32 144.4 233 38.2
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.6e-31 141.0 124 60.5
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 3.5e-31 139.8 210 41.4
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.6e-30 135.6 192 44.3
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 1.1e-29 134.8 70 91.4
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 1.7e-22 110.9 240 28.8
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 5.6e-21 105.9 65 76.9
C01p22960 Brassica napus HOM05D017401 ORTHO05D020044 4.9e-17 92.8 121 53.7
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 4.1e-16 89.7 47 91.5
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 7.8e-15 85.5 88 48.9
Sabra12G0002000 Salix brachista HOM05D000053 ORTHO05D000035 4.3e-13 79.7 81 56.8
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 9.6e-13 78.6 46 80.4
Sabra12G0002700 Salix brachista HOM05D005740 ORTHO05D000035 9.6e-13 78.6 77 57.1
Sabra12G0002200 Salix brachista HOM05D005740 ORTHO05D007085 2.9e-09 67.0 70 55.7
Sabra12G0007800 Salix brachista HOM05D000053 ORTHO05D000035 2.9e-09 67.0 48 66.7
Sabra12G0002900 Salix brachista HOM05D005740 ORTHO05D007085 1.4e-08 64.7 45 71.1
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 5.1e-06 56.2 50 52.0


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