Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G12450 Arabidopsis thaliana HOM05D000689 ORTHO05D015927 5.7e-29 130.2 64 100.0
AL6G23290 Arabidopsis lyrata HOM05D000689 ORTHO05D015927 2.5e-24 114.8 62 91.9
AL6G23310 Arabidopsis lyrata HOM05D000310 ORTHO05D002456 2.5e-24 114.8 62 91.9
AL6G23340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.5e-24 114.8 62 91.9
Carub.0006s1098 Capsella rubella HOM05D000689 ORTHO05D000015 7.0e-19 96.7 63 77.8
Thhalv10012238m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 9.2e-19 96.3 64 78.1
AL1G54370 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.5e-18 94.4 61 77.0
Carub.0001s3703 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-17 92.4 65 75.4
A08p05370 Brassica napus HOM05D000689 ORTHO05D000015 1.7e-17 92.0 65 76.9
CARHR228580 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.7e-17 92.0 64 76.6
CARHR038010 Cardamine hirsuta HOM05D000689 ORTHO05D015927 2.3e-17 91.7 62 74.2
Thhalv10013291m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.0e-17 90.5 62 74.2
BolC8t47432H Brassica oleracea HOM05D000689 ORTHO05D000015 6.6e-17 90.1 64 76.6
AT1G48390 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 8.6e-17 89.7 65 73.8
A10p28240 Brassica napus HOM05D000689 ORTHO05D000015 8.6e-17 89.7 61 73.8
AT1G48400 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.5e-16 89.0 63 68.3
C08p05800 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-16 89.0 64 75.0
C08p05810 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-16 89.0 64 75.0
C08p05820 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-16 89.0 64 75.0
AL1G25030 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.5e-16 88.2 64 73.4
AL1G25040 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.5e-16 88.2 64 73.4
BcaC04g18682 Brassica carinata HOM05D000689 ORTHO05D000015 3.3e-16 87.8 61 72.1
CARHR270010 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.3e-16 87.4 60 71.7
BraA05t19060Z Brassica rapa HOM05D000689 ORTHO05D000015 5.6e-16 87.0 63 73.0
C01p15690 Brassica napus HOM05D000689 ORTHO05D015927 7.3e-16 86.7 62 69.4
BolC1t01522H Brassica oleracea HOM05D000397 ORTHO05D002023 7.3e-16 86.7 62 69.4
A10p21080 Brassica napus HOM05D000689 ORTHO05D000015 9.5e-16 86.3 61 70.5
BraA10t44173Z Brassica rapa HOM05D000689 ORTHO05D000015 9.5e-16 86.3 61 70.5
BcaB04g17472 Brassica carinata HOM05D000689 ORTHO05D000015 1.6e-15 85.5 64 70.3
BcaC04g18680 Brassica carinata HOM05D000689 ORTHO05D000015 1.6e-15 85.5 61 70.5
A05p00630 Brassica napus HOM05D000689 ORTHO05D000015 1.6e-15 85.5 63 74.6
C09p58110 Brassica napus HOM05D000689 ORTHO05D000015 1.6e-15 85.5 61 70.5
BolC9t58670H Brassica oleracea HOM05D000689 ORTHO05D000015 1.6e-15 85.5 61 70.5
BolC9t58682H Brassica oleracea HOM05D000689 ORTHO05D000015 1.6e-15 85.5 61 70.5
Carub.0001s3751 Capsella rubella HOM05D000689 ORTHO05D000015 1.6e-15 85.5 62 67.7
BcaC09g51333 Brassica carinata HOM05D000689 ORTHO05D000015 2.1e-15 85.1 64 65.6
BcaC09g51335 Brassica carinata HOM05D000689 ORTHO05D000015 2.1e-15 85.1 64 65.6
BcaC09g51338 Brassica carinata HOM05D000689 ORTHO05D000015 2.1e-15 85.1 64 65.6
BcaC09g51340 Brassica carinata HOM05D000689 ORTHO05D000015 2.1e-15 85.1 64 65.6
C01p14120 Brassica napus HOM05D000689 ORTHO05D000015 2.1e-15 85.1 64 65.6
BolC8t47379H Brassica oleracea HOM05D000689 ORTHO05D015927 2.1e-15 85.1 62 66.1
Thhalv10022030m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.1e-15 85.1 62 72.6
BcaNung01794 Brassica carinata HOM05D000689 ORTHO05D000015 2.8e-15 84.7 65 67.7
BolC8t47383H Brassica oleracea HOM05D000689 ORTHO05D000015 2.8e-15 84.7 64 73.4
BolC1t01378H Brassica oleracea HOM05D000689 ORTHO05D000015 3.6e-15 84.3 65 67.7
CARHR039590 Cardamine hirsuta HOM05D000689 ORTHO05D015927 8.0e-15 83.2 62 67.7
BcaC02g12583 Brassica carinata HOM05D000689 ORTHO05D000015 1.0e-14 82.8 63 73.0
A01p12240 Brassica napus HOM05D000689 ORTHO05D000015 1.0e-14 82.8 65 66.2
BraA01t01165Z Brassica rapa HOM05D000689 ORTHO05D000015 1.0e-14 82.8 65 66.2
BcaB07g30958 Brassica carinata HOM05D000689 ORTHO05D000015 1.4e-14 82.4 65 66.2
BcaNung02239 Brassica carinata HOM05D000689 ORTHO05D000015 1.4e-14 82.4 62 67.7
C04p00680 Brassica napus HOM05D000689 ORTHO05D000015 1.8e-14 82.0 63 74.6
BcaC06g31360 Brassica carinata HOM05D000689 ORTHO05D000015 2.3e-14 81.6 62 64.5
BolC4t22009H Brassica oleracea HOM05D000689 ORTHO05D000015 2.3e-14 81.6 63 76.2
Carub.0001s3702 Capsella rubella HOM05D000689 ORTHO05D000015 2.3e-14 81.6 63 68.3
AT1G64540 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.1e-14 81.3 62 67.7
BcaB03g15811 Brassica carinata HOM05D000689 ORTHO05D000015 4.0e-14 80.9 63 73.0
BcaB05g24984 Brassica carinata HOM05D000689 ORTHO05D000015 4.0e-14 80.9 65 64.6
A03p19160 Brassica napus HOM05D000689 ORTHO05D000015 5.2e-14 80.5 61 62.3
CARHR252580 Cardamine hirsuta HOM05D000689 ORTHO05D000015 5.2e-14 80.5 62 71.0
BolC4t21701H Brassica oleracea HOM05D000689 ORTHO05D000015 6.8e-14 80.1 63 73.0
CARHR038000 Cardamine hirsuta HOM05D000689 ORTHO05D000015 6.8e-14 80.1 63 68.3
BcaC09g51214 Brassica carinata HOM05D000689 ORTHO05D015927 8.9e-14 79.7 62 64.5
Thhalv10025182m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 8.9e-14 79.7 62 64.5
AL7G25770 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.2e-13 79.3 62 62.9
AT4G27050 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.2e-13 79.3 57 64.9
AT1G47920 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.5e-13 79.0 61 68.9
BcaC02g12585 Brassica carinata HOM05D000689 ORTHO05D000015 2.0e-13 78.6 57 71.9
BraA08t32542Z Brassica rapa HOM05D000689 ORTHO05D000015 2.0e-13 78.6 57 75.4
BcaB01g06363 Brassica carinata HOM05D000689 ORTHO05D000015 2.6e-13 78.2 60 58.3
A01p13010 Brassica napus HOM05D000689 ORTHO05D015927 2.6e-13 78.2 62 62.9
BraA01t01243Z Brassica rapa HOM05D000689 ORTHO05D000015 2.6e-13 78.2 62 62.9
C08p05740 Brassica napus HOM05D000689 ORTHO05D015927 3.4e-13 77.8 56 76.8
C02p33160 Brassica napus HOM05D000689 ORTHO05D000015 4.4e-13 77.4 63 68.3
BolC8t47424H Brassica oleracea HOM05D000689 ORTHO05D000015 7.5e-13 76.6 56 75.0
BcaC03g15665 Brassica carinata HOM05D000689 ORTHO05D000015 9.8e-13 76.3 62 62.9
C02p33100 Brassica napus HOM05D000689 ORTHO05D000015 9.8e-13 76.3 62 62.9
BolC2t09386H Brassica oleracea HOM05D000689 ORTHO05D000015 9.8e-13 76.3 62 62.9
BraA02t07095Z Brassica rapa HOM05D000689 ORTHO05D000015 9.8e-13 76.3 62 62.9
BraA09t38386Z Brassica rapa HOM05D000689 ORTHO05D000015 9.8e-13 76.3 62 62.9
AL7G44920 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-12 75.9 62 64.5
BraA02t07087Z Brassica rapa HOM05D000689 ORTHO05D000015 2.9e-12 74.7 63 66.7
BraA02t07091Z Brassica rapa HOM05D000689 ORTHO05D000015 2.9e-12 74.7 63 66.7
Carub.0007s3312 Capsella rubella HOM05D000689 ORTHO05D000015 2.9e-12 74.7 63 61.9
A02p20610 Brassica napus HOM05D000689 ORTHO05D000015 3.7e-12 74.3 62 61.3
BcaC05g27966 Brassica carinata HOM05D000689 ORTHO05D032523 6.4e-12 73.6 62 58.1
BcaNung04095 Brassica carinata HOM05D000689 ORTHO05D000015 6.4e-12 73.6 62 61.3
BolC5t32714H Brassica oleracea HOM05D000689 ORTHO05D000015 6.4e-12 73.6 62 58.1
C08p22010 Brassica napus HOM05D000689 ORTHO05D020106 4.6e-10 67.4 63 60.3
C08p43820 Brassica napus HOM05D000689 ORTHO05D020106 4.6e-10 67.4 62 54.8
BolC8t49841H Brassica oleracea HOM05D000689 ORTHO05D020106 4.6e-10 67.4 63 60.3
BolC8t51931H Brassica oleracea HOM05D000689 ORTHO05D020106 4.6e-10 67.4 62 54.8
AT5G35995 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 6.0e-10 67.0 62 58.1
Carub.0007s3428 Capsella rubella HOM05D000689 ORTHO05D000015 1.7e-09 65.5 63 57.1
BcaB01g03146 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-08 62.0 69 49.3
AL4G24650 Arabidopsis lyrata HOM05D000689 ORTHO05D019707 4.3e-08 60.8 68 52.9
BolC4t21702H Brassica oleracea HOM05D000689 ORTHO05D000015 4.3e-08 60.8 48 72.9
Carub.0004s1100 Capsella rubella HOM05D000689 ORTHO05D000015 1.6e-07 58.9 70 51.4
Thhalv10016490m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.1e-07 58.5 70 50.0
BcaB01g02231 Brassica carinata HOM05D000689 ORTHO05D000015 3.6e-07 57.8 44 68.2
BcaC02g11071 Brassica carinata HOM05D000689 ORTHO05D000015 3.6e-07 57.8 69 46.4
C04p20820 Brassica napus HOM05D040039 ORTHO05D000015 3.6e-07 57.8 69 46.4
C04p47380 Brassica napus HOM05D000689 ORTHO05D000015 3.6e-07 57.8 60 48.3
Carub.0004s1101 Capsella rubella HOM05D000689 ORTHO05D000015 3.6e-07 57.8 68 45.6
AL1G55020 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.7e-07 57.4 42 69.0
CARHR151510 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.7e-07 57.4 64 48.4
Carub.0005s2571 Capsella rubella HOM05D000689 ORTHO05D000015 6.2e-07 57.0 61 47.5
AL5G40760 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 8.1e-07 56.6 61 47.5
A05p15520 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-06 56.2 69 46.4
BolC9t58677H Brassica oleracea HOM05D000689 ORTHO05D000015 1.1e-06 56.2 32 81.2
AT3G58920 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.4e-06 55.8 60 46.7
AT2G42730 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.8e-06 55.5 61 47.5
BcaB02g07944 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-06 55.5 54 48.1
BcaB06g27529 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-06 55.5 60 46.7
BolC4t26341H Brassica oleracea HOM05D000689 ORTHO05D000015 1.8e-06 55.5 60 45.0
BraA05t20468Z Brassica rapa HOM05D000689 ORTHO05D000015 1.8e-06 55.5 69 46.4
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 2.3e-06 55.1 64 48.4
AL1G35400 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.1e-06 54.7 68 48.5
AL1G53180 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.1e-06 54.7 68 48.5
BraA04t17807Z Brassica rapa HOM05D000689 ORTHO05D000015 3.1e-06 54.7 71 47.9
AL3G24690 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.0e-06 54.3 63 52.4
A04p13600 Brassica napus HOM05D000689 ORTHO05D000015 4.0e-06 54.3 60 46.7
BraA04t17021Z Brassica rapa HOM05D000689 ORTHO05D000015 4.0e-06 54.3 60 46.7
Thhalv10027779m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 4.0e-06 54.3 59 44.1
BolC4t23612H Brassica oleracea HOM05D000689 ORTHO05D000015 6.8e-06 53.5 64 45.3
CARHR123070 Cardamine hirsuta HOM05D000689 ORTHO05D000015 6.8e-06 53.5 63 47.6
AT2G29930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 8.9e-06 53.1 68 44.1
AT3G58960 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 8.9e-06 53.1 61 50.8


User provided reference genes

Program Settings