Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.3e-245 852.8 479 100.0
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 4.0e-228 794.7 477 95.2
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 1.7e-218 762.7 479 83.9
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.2e-208 729.9 482 88.0
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.6e-208 729.6 482 82.2
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.8e-207 726.1 480 81.0
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 2.3e-199 699.1 482 77.2
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 7.5e-190 667.5 484 82.0
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 1.3e-189 666.8 484 81.8
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 3.2e-185 652.1 483 80.3
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 3.2e-185 652.1 482 80.5
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 8.8e-183 644.0 484 80.0
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 5.7e-182 641.3 480 80.0
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 2.4e-180 636.0 479 78.3
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 4.7e-176 621.7 476 78.4
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.1e-172 610.5 483 67.5
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 3.2e-172 609.0 481 73.8
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 3.5e-171 605.5 481 76.5
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 7.3e-169 597.8 486 68.3
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 1.2e-168 597.0 474 76.8
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 4.6e-163 578.6 485 70.1
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 6.6e-162 574.7 478 70.5
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 5.2e-159 565.1 474 69.2
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 3.4e-158 562.4 474 68.8
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 1.3e-157 560.5 449 71.3
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 6.4e-157 558.1 479 68.1
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.4e-156 557.0 483 68.3
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 3.2e-156 555.8 476 67.4
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 5.4e-156 555.1 488 68.0
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 1.1e-153 547.4 480 68.5
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 1.1e-151 540.8 476 67.9
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 2.2e-149 533.1 486 64.6
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 4.9e-149 531.9 475 66.9
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 6.4e-149 531.6 488 63.1
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 1.4e-148 530.4 478 64.0
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 2.4e-148 529.6 485 62.9
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.2e-148 529.3 475 63.6
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 5.4e-148 528.5 479 63.9
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 7.1e-148 528.1 486 59.7
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 7.1e-148 528.1 488 62.7
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 6.0e-147 525.0 481 65.3
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 3.0e-146 522.7 477 66.0
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 5.1e-146 521.9 474 62.7
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 6.6e-146 521.5 488 60.0
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.5e-145 519.6 474 60.5
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 3.3e-145 519.2 487 60.4
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 7.3e-145 518.1 474 62.4
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 6.2e-144 515.0 496 58.5
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 8.1e-144 514.6 474 63.3
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 1.1e-143 514.2 482 61.6
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.8e-143 513.5 468 59.4
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 2.4e-143 513.1 504 57.5
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 8.9e-143 511.1 494 62.3
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 1.5e-142 510.4 482 60.8
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 2.6e-142 509.6 489 58.3
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 9.9e-142 507.7 459 59.5
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 8.4e-141 504.6 493 61.3
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 8.4e-141 504.6 473 66.6
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 1.1e-140 504.2 489 64.8
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 1.9e-140 503.4 476 57.6
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 3.2e-140 502.7 486 57.4
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 3.2e-140 502.7 399 65.2
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 4.2e-140 502.3 488 61.7
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 5.4e-140 501.9 484 65.1
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 7.1e-140 501.5 479 59.9
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 2.7e-139 499.6 434 66.8
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 4.6e-139 498.8 470 59.8
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.0e-139 498.4 486 58.8
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 1.0e-138 497.7 479 66.8
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 2.3e-138 496.5 486 64.8
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 3.0e-138 496.1 484 64.3
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 6.6e-138 495.0 489 59.1
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 8.7e-138 494.6 480 58.1
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 1.1e-137 494.2 487 57.1
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.5e-137 493.8 482 58.5
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.9e-137 493.4 492 58.5
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 1.9e-137 493.4 484 61.4
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 2.5e-137 493.0 486 64.6
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 9.6e-137 491.1 484 63.6
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 2.1e-136 490.0 472 63.1
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 2.1e-136 490.0 479 56.2
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 2.8e-136 489.6 482 57.9
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.8e-136 489.6 490 62.2
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 8.1e-136 488.0 481 65.1
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 1.4e-135 487.3 480 59.8
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 1.8e-135 486.9 454 60.4
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 5.3e-135 485.3 477 56.8
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.9e-135 485.0 481 59.3
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 9.0e-135 484.6 485 57.7
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 9.0e-135 484.6 459 58.4
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 1.2e-134 484.2 481 60.1
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 1.5e-134 483.8 483 56.9
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 1.5e-134 483.8 489 56.9
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.0e-134 483.4 479 57.8
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 2.0e-134 483.4 473 56.7
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 2.6e-134 483.0 482 57.5
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 3.4e-134 482.6 487 59.8
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 5.8e-134 481.9 484 58.7
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.3e-133 480.7 389 69.2
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 1.3e-133 480.7 487 55.9
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 3.8e-133 479.2 476 55.5
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 6.4e-133 478.4 481 57.6
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 6.4e-133 478.4 468 59.0
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 6.4e-133 478.4 495 56.2
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 6.4e-133 478.4 479 58.7
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 8.4e-133 478.0 429 59.2
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 8.4e-133 478.0 485 56.7
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 1.1e-132 477.6 472 58.1
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 1.9e-132 476.9 476 56.7
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 9.3e-132 474.6 483 61.1
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 1.2e-131 474.2 485 56.1
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 1.2e-131 474.2 479 58.7
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.6e-131 473.8 401 62.6
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 3.5e-131 472.6 403 62.3
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 3.5e-131 472.6 498 55.2
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 8.7e-130 468.0 266 86.5
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 1.5e-129 467.2 477 57.4
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.5e-129 466.5 478 57.3
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 2.8e-128 463.0 481 57.8
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 3.6e-128 462.6 488 58.0
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 4.8e-128 462.2 487 55.6
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 3.1e-127 459.5 478 57.3
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 1.2e-126 457.6 485 56.1
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 4.5e-126 455.7 465 53.5
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 4.5e-126 455.7 486 53.3
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 1.7e-125 453.8 460 59.8
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 1.1e-124 451.1 480 59.4
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 1.1e-124 451.1 381 63.0
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 1.9e-124 450.3 493 53.3
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 5.5e-124 448.7 481 63.2
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 7.1e-124 448.4 404 60.9
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.6e-123 447.2 485 50.7
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.1e-123 446.8 492 55.3
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 4.6e-123 445.7 389 60.2
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 3.0e-122 443.0 490 53.3
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 3.1e-119 433.0 485 52.2
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 5.3e-119 432.2 396 57.1
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 1.2e-118 431.0 449 59.9
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 2.9e-117 426.4 464 52.8
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 3.8e-117 426.0 478 51.5
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.5e-116 423.3 316 66.5
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.8e-114 417.2 397 58.2
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 8.7e-114 414.8 408 59.3
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 4.8e-112 409.1 390 55.1
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 1.8e-111 407.1 461 54.2
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 2.6e-110 403.3 382 60.7
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 6.5e-101 372.1 470 46.4
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 2.9e-93 346.7 385 50.4
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 1.7e-85 320.9 389 44.7
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.4e-82 311.2 339 50.7
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.5e-81 307.8 480 42.5
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 7.3e-60 235.7 328 41.2
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 1.0e-58 231.9 335 45.1
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 4.4e-57 226.5 191 62.8
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 3.7e-56 223.4 195 76.4
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 1.5e-49 201.4 363 34.4
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 9.8e-49 198.7 249 47.8
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 1.7e-37 161.4 117 64.1
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.5e-36 157.5 137 71.5
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.2e-32 144.4 129 70.5
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 1.9e-31 141.4 98 66.3
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.9e-31 141.4 147 50.3
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 7.1e-31 139.4 314 36.6
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 7.8e-30 136.0 145 55.2
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 3.9e-29 133.7 340 31.2
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.1e-28 132.1 129 62.8
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.1e-26 125.6 99 61.6
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 3.8e-24 117.1 316 31.0
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 9.3e-23 112.5 149 42.3
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 9.3e-23 112.5 149 42.3
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 3.6e-19 100.5 347 28.2
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 1.9e-15 88.2 69 52.2
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 1.4e-10 72.0 47 70.2
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 5.3e-10 70.1 109 45.0


User provided reference genes

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