Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G54590 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 5.3e-27 127.1 89 100.0
AT3G54580 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 1.3e-20 105.9 89 79.8
AL5G35670 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 3.7e-20 104.4 56 92.9
Carub.0005s0710 Capsella rubella HOM05D009529 ORTHO05D011424 7.7e-18 96.7 58 84.5
AL5G35660 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 6.5e-17 93.6 55 87.3
AT3G28550 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 8.0e-15 86.7 61 78.7
AL5G18190 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 5.2e-14 84.0 60 75.0
AL5G18170 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 1.1e-13 82.8 60 73.3
Carub.0008s0922 Capsella rubella HOM05D009529 ORTHO05D011424 3.3e-13 81.3 58 74.1
BcaC02g09059 Brassica carinata HOM05D009529 ORTHO05D011424 4.4e-13 80.9 61 72.1
BraA07t29899Z Brassica rapa HOM05D009529 ORTHO05D011424 6.3e-12 77.0 62 72.6
BraA09t40210Z Brassica rapa HOM05D009529 ORTHO05D011424 1.4e-11 75.9 61 67.2
A09p47540 Brassica napus HOM05D009529 ORTHO05D011424 4.1e-11 74.3 61 65.6
AT1G23720 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 1.3e-09 69.3 56 71.4
BolC8t50585H Brassica oleracea HOM05D009529 ORTHO05D011424 1.3e-09 69.3 64 64.1
Carub.0008s0750 Capsella rubella HOM05D009529 ORTHO05D011424 1.7e-09 68.9 40 87.5
AL1G37470 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 2.2e-09 68.6 56 67.9
C05p22920 Brassica napus HOM05D009529 ORTHO05D011424 3.8e-09 67.8 56 66.1
C05p22930 Brassica napus HOM05D009529 ORTHO05D011424 3.8e-09 67.8 56 66.1
A09p47530 Brassica napus HOM05D009529 ORTHO05D011424 8.5e-09 66.6 55 70.9
C08p29740 Brassica napus HOM05D009529 ORTHO05D011424 8.5e-09 66.6 55 70.9
Carub.0001s2324 Capsella rubella HOM05D009529 ORTHO05D011424 1.1e-08 66.2 60 65.0
BraA08t34734Z Brassica rapa HOM05D009529 ORTHO05D011424 1.5e-08 65.9 59 62.7
CARHR164480 Cardamine hirsuta HOM05D009529 ORTHO05D011424 9.4e-08 63.2 51 74.5
Aa31LG8G13560 Aethionema arabicum HOM05D009529 ORTHO05D011424 1.8e-06 58.9 56 60.7
CARHR164490 Cardamine hirsuta HOM05D009529 ORTHO05D011424 6.7e-06 57.0 40 80.0


User provided reference genes

Program Settings