Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G54580 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 3.2e-30 138.3 89 100.0
AL5G35660 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 1.0e-20 106.7 55 92.7
AT3G54590 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 2.3e-20 105.5 89 79.8
AL5G35670 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 5.2e-17 94.4 56 83.9
Carub.0005s0710 Capsella rubella HOM05D009529 ORTHO05D011424 4.4e-16 91.3 58 75.9
AL5G18170 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 2.9e-15 88.6 55 76.4
AL5G18190 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 2.9e-15 88.6 56 76.8
AT3G28550 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 3.7e-15 88.2 56 78.6
Carub.0008s0922 Capsella rubella HOM05D009529 ORTHO05D011424 1.4e-14 86.3 58 75.9
BcaC02g09059 Brassica carinata HOM05D009529 ORTHO05D011424 4.3e-11 74.7 58 67.2
BraA07t29899Z Brassica rapa HOM05D009529 ORTHO05D011424 4.3e-11 74.7 59 74.6
A09p47540 Brassica napus HOM05D009529 ORTHO05D011424 1.6e-10 72.8 59 71.2
BraA09t40210Z Brassica rapa HOM05D009529 ORTHO05D011424 1.6e-10 72.8 59 71.2
AL1G37470 Arabidopsis lyrata HOM05D009529 ORTHO05D011424 4.0e-09 68.2 56 66.1
AT1G23720 Arabidopsis thaliana HOM05D009529 ORTHO05D011424 4.0e-09 68.2 56 67.9
C05p22920 Brassica napus HOM05D009529 ORTHO05D011424 6.8e-09 67.4 56 66.1
C05p22930 Brassica napus HOM05D009529 ORTHO05D011424 6.8e-09 67.4 56 66.1
CARHR164480 Cardamine hirsuta HOM05D009529 ORTHO05D011424 1.2e-08 66.6 51 72.5
A09p47530 Brassica napus HOM05D009529 ORTHO05D011424 1.5e-08 66.2 55 69.1
C08p29740 Brassica napus HOM05D009529 ORTHO05D011424 1.5e-08 66.2 55 69.1
BolC8t50585H Brassica oleracea HOM05D009529 ORTHO05D011424 1.5e-08 66.2 61 59.0
Carub.0001s2324 Capsella rubella HOM05D009529 ORTHO05D011424 2.6e-08 65.5 60 61.7
Carub.0008s0750 Capsella rubella HOM05D009529 ORTHO05D011424 2.6e-08 65.5 40 80.0
BraA08t34734Z Brassica rapa HOM05D009529 ORTHO05D011424 4.4e-08 64.7 56 62.5
CARHR164490 Cardamine hirsuta HOM05D009529 ORTHO05D011424 2.2e-07 62.4 90 61.1
Aa31LG8G13560 Aethionema arabicum HOM05D009529 ORTHO05D011424 1.9e-06 59.3 56 58.9


User provided reference genes

Program Settings