Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G45525 Arabidopsis thaliana HOM05D000327 ORTHO05D014282 6.1e-61 237.3 118 100.0
AT3G45480 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 7.6e-27 124.0 77 83.1
AL5G24100 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 1.5e-19 99.8 85 65.9
AL5G24030 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 1.8e-15 86.3 84 59.5
AT3G45460 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 6.2e-13 77.8 83 56.6
Carub.0005s1132 Capsella rubella HOM05D000327 ORTHO05D000218 2.4e-12 75.9 76 57.9
Carub.0005s0940 Capsella rubella HOM05D000327 ORTHO05D000218 2.6e-11 72.4 78 55.1
CARHR150200 Cardamine hirsuta HOM05D000327 ORTHO05D000218 2.6e-11 72.4 86 51.2
AL5G24120 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 3.8e-10 68.6 52 69.2
Carub.0005s1129 Capsella rubella HOM05D000327 ORTHO05D000218 4.9e-10 68.2 68 58.8
AL6G15230 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 6.4e-10 67.8 54 66.7
AT3G45580 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 6.4e-10 67.8 82 48.8
AL5G21720 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 2.4e-09 65.9 71 53.5
CARHR256190 Cardamine hirsuta HOM05D000327 ORTHO05D000218 2.4e-09 65.9 76 51.3
CARHR114860 Cardamine hirsuta HOM05D000327 ORTHO05D000218 4.2e-09 65.1 68 52.9
AL5G21730 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 7.1e-09 64.3 71 52.1
AT2G26130 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 1.2e-08 63.5 81 50.6
Carub.0005s0944 Capsella rubella HOM05D000327 ORTHO05D000218 1.2e-08 63.5 72 52.8
BcaC03g17056 Brassica carinata HOM05D000327 ORTHO05D000218 2.7e-08 62.4 64 56.2
C02p49760 Brassica napus HOM05D000327 ORTHO05D000218 2.7e-08 62.4 64 56.2
BolC2t11055H Brassica oleracea HOM05D000327 ORTHO05D000218 2.7e-08 62.4 64 56.2
CARHR143200 Cardamine hirsuta HOM05D000327 ORTHO05D000218 2.7e-08 62.4 66 56.1
AL5G24110 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 4.6e-08 61.6 75 50.7
Carub.0005s0953 Capsella rubella HOM05D000327 ORTHO05D000218 1.3e-07 60.1 69 53.6
A02p32180 Brassica napus HOM05D000327 ORTHO05D000218 1.8e-07 59.7 64 53.1
Aa31LG4G14700 Aethionema arabicum HOM05D000327 ORTHO05D000218 2.3e-07 59.3 101 39.6
AT3G45500 Arabidopsis thaliana HOM05D000327 ORTHO05D014282 3.0e-07 58.9 87 47.1
BcaB06g29607 Brassica carinata HOM05D000327 ORTHO05D000218 3.0e-07 58.9 73 52.1
BcaB07g30388 Brassica carinata HOM05D000327 ORTHO05D000218 3.0e-07 58.9 65 52.3
Aa31LG4G14760 Aethionema arabicum HOM05D000327 ORTHO05D000218 3.9e-07 58.5 98 40.8
AT3G43750 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 3.9e-07 58.5 67 50.7
AT3G45570 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 3.9e-07 58.5 83 47.0
A04p20230 Brassica napus HOM05D000327 ORTHO05D000218 5.1e-07 58.2 74 50.0
BraA04t17602Z Brassica rapa HOM05D000327 ORTHO05D000218 5.1e-07 58.2 74 50.0
CARHR263000 Cardamine hirsuta HOM05D000327 ORTHO05D014282 5.1e-07 58.2 73 46.6
Thhalv10003078m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 5.1e-07 58.2 64 53.1
Aa31LG6G10210 Aethionema arabicum HOM05D000327 ORTHO05D000218 6.7e-07 57.8 98 38.8
BraA02t08232Z Brassica rapa HOM05D000327 ORTHO05D000218 6.7e-07 57.8 64 51.6
Aa31LG4G14690 Aethionema arabicum HOM05D000327 ORTHO05D000218 1.5e-06 56.6 101 36.6
A07p18400 Brassica napus HOM05D000327 ORTHO05D000218 1.5e-06 56.6 81 40.7
BraA07t29556Z Brassica rapa HOM05D000327 ORTHO05D000218 1.5e-06 56.6 81 40.7
Carub.0005s1141 Capsella rubella HOM05D000327 ORTHO05D000218 1.5e-06 56.6 66 51.5
Aa31LG4G14710 Aethionema arabicum HOM05D000327 ORTHO05D000218 4.3e-06 55.1 101 36.6
BcaC02g08308 Brassica carinata HOM05D000327 ORTHO05D000218 4.3e-06 55.1 74 48.6
C04p55940 Brassica napus HOM05D000327 ORTHO05D000218 4.3e-06 55.1 74 48.6
BolC4t27127H Brassica oleracea HOM05D000327 ORTHO05D000218 4.3e-06 55.1 74 48.6
Aa31LG4G14770 Aethionema arabicum HOM05D000327 ORTHO05D000218 5.6e-06 54.7 96 39.6
Aa31LG4G14780 Aethionema arabicum HOM05D000327 ORTHO05D000218 5.6e-06 54.7 52 51.9
Aa31LG4G14720 Aethionema arabicum HOM05D000327 ORTHO05D000218 9.6e-06 53.9 101 37.6
Aa31LG4G14730 Aethionema arabicum HOM05D000327 ORTHO05D000218 9.6e-06 53.9 101 37.6
AL4G18370 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 9.6e-06 53.9 72 48.6


User provided reference genes

Program Settings