Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 2.8e-34 148.7 116 100.0
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 3.8e-31 138.3 115 82.6
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 1.9e-30 136.0 116 92.2
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 5.7e-27 124.4 114 87.7
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 7.4e-27 124.0 116 74.1
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 8.2e-26 120.6 116 87.1
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 2.6e-24 115.5 116 84.5
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 4.5e-24 114.8 113 87.6
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 5.9e-24 114.4 115 85.2
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 5.9e-24 114.4 115 85.2
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 5.9e-24 114.4 114 78.1
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.2e-21 106.7 113 82.3
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 8.8e-20 100.5 116 64.7
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.2e-19 100.1 116 56.0
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 2.0e-19 99.4 115 65.2
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.4e-19 98.6 113 65.5
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 3.4e-19 98.6 114 71.1
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 4.4e-19 98.2 116 69.0
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 4.4e-19 98.2 116 69.0
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 5.7e-19 97.8 116 62.1
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 7.5e-19 97.4 115 62.6
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 7.5e-19 97.4 116 65.5
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 9.7e-19 97.1 113 64.6
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 9.7e-19 97.1 116 62.9
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 9.7e-19 97.1 113 67.3
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.3e-18 96.7 116 64.7
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 1.7e-18 96.3 115 69.6
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 2.2e-18 95.9 116 61.2
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 2.2e-18 95.9 115 48.7
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 2.2e-18 95.9 115 48.7
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-18 95.5 118 63.6
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-18 95.5 118 66.9
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-18 95.5 116 66.4
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.8e-18 95.5 116 69.0
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 3.7e-18 95.1 116 64.7
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 3.7e-18 95.1 116 64.7
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 3.7e-18 95.1 116 51.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 3.7e-18 95.1 113 62.8
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 4.8e-18 94.7 115 60.0
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 6.3e-18 94.4 114 66.7
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 6.3e-18 94.4 116 66.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 8.3e-18 94.0 116 46.6
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 8.3e-18 94.0 116 56.9
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 8.3e-18 94.0 117 64.1
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.1e-17 93.6 106 83.0
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.4e-17 93.2 115 67.8
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 1.4e-17 93.2 115 63.5
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.4e-17 93.2 116 66.4
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.4e-17 93.2 113 64.6
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.8e-17 92.8 114 46.5
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 1.8e-17 92.8 116 54.3
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.8e-17 92.8 117 66.7
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.8e-17 92.8 116 64.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.8e-17 92.8 116 64.7
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.8e-17 92.8 116 63.8
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.1e-17 92.0 117 65.8
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 3.1e-17 92.0 113 55.8
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 4.1e-17 91.7 112 67.0
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 4.1e-17 91.7 109 59.6
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.1e-17 91.7 114 60.5
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 4.1e-17 91.7 115 48.7
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 5.3e-17 91.3 116 62.1
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 7.0e-17 90.9 116 62.1
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 7.0e-17 90.9 112 61.6
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 7.0e-17 90.9 116 62.1
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 7.0e-17 90.9 116 61.2
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 7.0e-17 90.9 116 62.1
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 9.1e-17 90.5 116 60.3
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 9.1e-17 90.5 111 59.5
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 1.2e-16 90.1 116 62.9
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.6e-16 89.7 116 62.9
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 3.5e-16 88.6 115 64.3
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 3.5e-16 88.6 116 44.8
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 4.5e-16 88.2 118 62.7
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 5.9e-16 87.8 115 45.2
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 1.0e-15 87.0 116 59.5
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.3e-15 86.7 121 59.5
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 1.3e-15 86.7 116 43.1
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.7e-15 86.3 116 55.2
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 1.7e-15 86.3 110 65.5
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.2e-15 85.9 112 58.9
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 2.9e-15 85.5 116 62.1
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 2.9e-15 85.5 116 62.9
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 6.5e-15 84.3 116 50.0
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 6.5e-15 84.3 112 55.4
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 3.2e-14 82.0 118 59.3
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.2e-14 82.0 115 53.9
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 3.2e-14 82.0 113 42.5
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.2e-14 81.6 116 51.7
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.2e-14 81.6 115 53.9
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 1.6e-13 79.7 90 85.6
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.7e-13 78.2 114 40.4
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.3e-12 75.9 114 40.4
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 4.0e-12 75.1 112 42.0
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 5.2e-12 74.7 116 61.2
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 8.8e-12 73.9 113 43.4
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 8.8e-12 73.9 116 37.9
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.5e-11 73.2 112 51.8
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 2.0e-11 72.8 82 82.9
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 3.4e-11 72.0 116 40.5
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 1.3e-10 70.1 115 58.3
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 1.1e-09 67.0 40 87.5
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.8e-09 66.2 114 54.4
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 3.1e-09 65.5 40 80.0
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 4.1e-09 65.1 39 79.5
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 5.4e-09 64.7 82 46.3
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.0e-09 64.3 94 39.4
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 7.0e-09 64.3 40 77.5
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 1.2e-08 63.5 93 64.5
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 1.6e-08 63.2 83 56.6
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.0e-08 62.8 84 41.7
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.7e-08 62.4 84 58.3
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 3.5e-08 62.0 90 63.3
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 4.5e-08 61.6 38 73.7
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 4.5e-08 61.6 40 72.5
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.0e-07 60.5 38 73.7
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.3e-07 60.1 84 40.5
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.7e-07 59.7 40 72.5
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 2.9e-07 58.9 40 65.0
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 5.0e-07 58.2 91 60.4
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 8.6e-07 57.4 104 56.7
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.9e-06 56.2 90 61.1
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.5e-06 55.8 92 62.0


User provided reference genes

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