Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 8.0e-140 500.4 244 100.0
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.9e-136 489.2 244 98.0
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 3.9e-134 481.5 244 95.1
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 4.7e-132 474.6 244 93.4
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 2.6e-130 468.8 244 91.8
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 2.9e-129 465.3 244 91.4
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 1.2e-127 459.9 244 89.3
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 2.7e-127 458.8 245 89.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 3.0e-126 455.3 245 88.6
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 5.1e-126 454.5 244 90.6
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 5.6e-125 451.1 244 86.9
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.2e-124 449.9 245 86.9
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 3.6e-124 448.4 245 87.3
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 1.9e-120 436.0 244 84.8
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 2.4e-112 409.1 244 79.1
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 4.3e-109 398.3 241 77.6
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 4.3e-109 398.3 244 77.9
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 9.6e-109 397.1 241 76.8
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 2.1e-108 396.0 244 76.6
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 2.1e-108 396.0 241 77.2
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 6.2e-108 394.4 241 77.2
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.1e-107 393.7 244 75.4
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.1e-107 393.7 241 77.2
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 1.1e-107 393.7 239 76.6
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.4e-107 393.3 241 77.2
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 1.8e-107 392.9 241 75.5
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 2.4e-107 392.5 241 75.5
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 3.1e-107 392.1 241 74.3
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.0e-106 389.4 246 75.6
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 2.0e-106 389.4 241 75.5
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.3e-105 386.7 244 73.8
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 2.9e-105 385.6 241 75.9
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 3.8e-105 385.2 244 73.8
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.9e-105 384.8 241 75.1
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 6.4e-105 384.4 244 74.6
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.1e-104 383.6 244 73.8
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-104 383.6 244 73.8
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.9e-104 382.9 244 75.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 1.9e-104 382.9 244 73.8
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.2e-104 382.1 244 73.0
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 5.4e-104 381.3 241 73.4
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 5.4e-104 381.3 241 73.9
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 7.1e-104 380.9 239 74.5
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 7.1e-104 380.9 246 74.0
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 9.3e-104 380.6 246 74.4
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 1.2e-103 380.2 244 72.5
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.6e-103 379.8 238 74.4
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 2.1e-103 379.4 242 73.1
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 4.6e-103 378.3 244 72.5
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 4.6e-103 378.3 244 73.4
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 4.6e-103 378.3 241 73.9
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.0e-102 377.1 242 73.1
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.0e-102 377.1 244 72.1
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 2.3e-102 375.9 244 72.1
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 3.0e-102 375.6 245 72.7
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 3.0e-102 375.6 260 69.6
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 5.1e-102 374.8 244 71.7
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 6.7e-102 374.4 244 72.5
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 1.1e-101 373.6 241 74.3
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.5e-101 373.2 244 70.1
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.9e-101 372.9 242 72.3
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 2.5e-101 372.5 244 71.3
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 4.3e-101 371.7 242 70.2
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 5.6e-101 371.3 244 71.7
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 9.6e-101 370.5 244 71.7
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 1.3e-100 370.2 242 70.2
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 2.8e-100 369.0 282 64.9
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 6.2e-100 367.9 241 71.4
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 6.2e-100 367.9 272 65.4
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 8.1e-100 367.5 230 73.9
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 1.1e-99 367.1 241 71.8
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 1.8e-99 366.3 293 61.8
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 6.9e-99 364.4 241 72.6
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 9.0e-99 364.0 242 69.0
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 2.0e-98 362.8 226 74.8
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 4.5e-98 361.7 273 66.3
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 5.8e-98 361.3 229 75.1
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.3e-97 360.1 239 70.7
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 1.7e-97 359.8 254 69.3
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.4e-96 356.7 241 69.3
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 2.7e-95 352.4 242 69.8
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.7e-95 352.4 241 68.0
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.5e-95 352.1 241 68.5
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 4.6e-95 351.7 239 67.8
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 1.0e-94 350.5 228 71.5
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 5.1e-94 348.2 241 67.2
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 7.4e-93 344.4 241 67.6
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 1.3e-92 343.6 207 76.3
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 2.9e-89 332.4 244 65.2
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.1e-88 330.5 244 65.2
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 1.4e-88 330.1 210 72.4
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 5.5e-88 328.2 325 53.5
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.3e-86 323.6 202 74.3
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 2.5e-85 319.3 281 55.2
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.4e-85 317.8 203 73.4
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 4.5e-82 308.5 205 69.3
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.7e-81 306.6 256 56.2
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 6.7e-78 294.7 241 59.8
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.3e-77 292.0 298 51.7
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.7e-77 290.8 241 58.5
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 3.7e-76 288.9 250 52.4
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 1.1e-75 287.3 218 66.1
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 2.6e-69 266.2 316 43.7
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.2e-63 247.3 257 48.6
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 1.4e-59 233.8 249 47.4
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.5e-56 223.0 250 47.2
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 8.8e-54 214.5 239 45.6
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 4.4e-53 212.2 256 43.4
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 3.1e-51 206.1 340 39.4
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 3.5e-50 202.6 120 82.5
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.2e-48 196.1 143 69.2
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.6e-47 192.6 120 74.2
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 7.5e-45 184.9 108 75.0
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.6e-34 150.6 94 74.5
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.0e-33 145.6 81 74.1
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 1.6e-23 114.0 166 45.8
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.4e-21 105.9 83 59.0
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.4e-21 105.9 83 59.0
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.8e-21 105.5 57 75.4
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.6e-18 97.4 51 88.2
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 7.8e-18 95.1 51 86.3
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 7.8e-18 95.1 51 86.3
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.7e-17 94.0 75 58.7
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 1.1e-16 91.3 69 65.2
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 8.1e-15 85.1 60 63.3
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 4.0e-14 82.8 43 86.0
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 1.1e-11 74.7 38 86.8
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 9.2e-11 71.6 38 84.2
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 7.8e-10 68.6 101 37.6
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 8.1e-07 58.5 70 40.0
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 2.4e-06 57.0 73 42.5
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.2e-06 55.8 77 37.7


User provided reference genes

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