Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 6.3e-197 690.6 369 100.0
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 3.6e-184 648.3 370 94.3
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 5.4e-172 607.8 359 91.9
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 3.1e-135 485.7 360 75.6
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 3.1e-135 485.7 360 75.6
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 1.4e-106 390.6 372 63.4
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 4.0e-82 309.3 410 49.5
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 1.8e-66 257.3 402 44.0
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 2.3e-58 230.3 357 45.7
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 2.0e-57 227.3 355 45.1
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 2.0e-57 227.3 355 45.1
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 3.7e-56 223.0 340 46.8
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 3.7e-56 223.0 358 44.7
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 1.9e-55 220.7 358 44.4
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 1.2e-54 218.0 338 45.6
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 1.5e-52 211.1 347 43.8
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 1.5e-52 211.1 347 43.8
A05p12940 Brassica napus HOM05D007973 ORTHO05D011363 8.7e-45 185.3 339 40.1
BraA05t20234Z Brassica rapa HOM05D007973 ORTHO05D011363 8.7e-45 185.3 339 40.1
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 4.8e-43 179.5 344 39.8
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 6.2e-43 179.1 339 40.1
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.2e-41 174.9 350 40.0
A05p13350 Brassica napus HOM05D007973 ORTHO05D011363 1.5e-41 174.5 345 41.2
BraA05t20274Z Brassica rapa HOM05D007973 ORTHO05D011363 1.5e-41 174.5 345 41.2
BcaB02g10454 Brassica carinata HOM05D007973 ORTHO05D011363 2.6e-41 173.7 338 38.5
BcaC02g11344 Brassica carinata HOM05D007973 ORTHO05D011363 1.3e-40 171.4 344 37.5
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 6.0e-38 162.5 341 38.4
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 8.1e-35 152.1 351 36.5
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 4.5e-33 146.4 350 35.7
BcaC02g11347 Brassica carinata HOM05D007973 ORTHO05D011363 1.2e-30 138.3 335 35.2
C04p17030 Brassica napus HOM05D007973 ORTHO05D011363 1.6e-30 137.9 93 72.0
CARHR123860 Cardamine hirsuta HOM05D007973 ORTHO05D011363 4.6e-30 136.3 253 40.7
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 2.5e-28 130.6 350 33.7
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 2.5e-28 130.6 350 33.7
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 2.5e-28 130.6 349 35.0
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 4.3e-28 129.8 393 32.3
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 5.6e-28 129.4 341 34.6
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 7.4e-28 129.0 393 32.3
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 9.6e-28 128.6 332 34.9
THA.LOC104819096 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.1e-26 125.2 392 31.4
BolC8t48474H Brassica oleracea HOM05D007973 ORTHO05D011363 3.1e-26 123.6 287 38.7
BolC8t48477H Brassica oleracea HOM05D007973 ORTHO05D011363 4.0e-26 123.2 287 38.7
BcaC07g38070 Brassica carinata HOM05D007973 ORTHO05D011363 4.9e-24 116.3 300 40.0
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 6.5e-24 115.9 271 37.3
AL4G28640 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 4.1e-18 96.7 205 38.0
BcaB01g03937 Brassica carinata HOM05D007973 ORTHO05D011027 1.5e-17 94.7 160 38.1
BraA03t11099Z Brassica rapa HOM05D007973 ORTHO05D011027 1.0e-16 92.0 137 44.5
THA.LOC104798702 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.3e-16 91.7 108 50.9
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 2.2e-16 90.9 267 33.0
THA.LOC104813254 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.2e-16 90.9 334 30.8
C03p21430 Brassica napus HOM05D007973 ORTHO05D011027 6.5e-16 89.4 92 52.2
BolC3t14526H Brassica oleracea HOM05D007973 ORTHO05D011027 6.5e-16 89.4 92 52.2
AT2G33090 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 8.4e-16 89.0 105 47.6
CARHR120790 Cardamine hirsuta HOM05D007973 ORTHO05D011027 8.4e-16 89.0 92 51.1
BcaB01g03935 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-15 88.6 129 44.2
BcaC01g05861 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-15 88.6 92 52.2
BcaB01g03938 Brassica carinata HOM05D007973 ORTHO05D011027 1.9e-15 87.8 96 49.0
A03p18360 Brassica napus HOM05D007973 ORTHO05D011027 1.9e-15 87.8 137 43.1
C03p21640 Brassica napus HOM05D007973 ORTHO05D011027 2.5e-15 87.4 91 51.6
BolC3t14548H Brassica oleracea HOM05D007973 ORTHO05D011027 2.5e-15 87.4 91 51.6
Aa31LG10G13500 Aethionema arabicum HOM05D007973 ORTHO05D011027 3.2e-15 87.0 146 40.4
Sp4g14560 Schrenkiella parvula HOM05D007973 ORTHO05D011363 4.2e-15 86.7 77 58.4
Aa31LG10G13910 Aethionema arabicum HOM05D007973 ORTHO05D011027 1.6e-14 84.7 93 52.7
BcaC01g05887 Brassica carinata HOM05D007973 ORTHO05D011027 1.8e-13 81.3 168 35.7
Aa31LG6G8590 Aethionema arabicum HOM05D007973 ORTHO05D011363 2.3e-13 80.9 113 46.9
Thhalv10023971m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 5.1e-13 79.7 86 46.5
Thhalv10024105m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.5e-12 78.2 185 37.8
AL6G33790 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 2.2e-11 74.3 78 52.6
BcaC01g05890 Brassica carinata HOM05D007973 ORTHO05D011027 2.8e-11 73.9 276 31.2
Cpa.g.sc17.122 Carica papaya HOM05D002276 ORTHO05D002381 4.8e-11 73.2 103 41.7
Cpa.g.c30173.2 Carica papaya HOM05D002276 ORTHO05D002381 3.1e-10 70.5 105 40.0
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 6.9e-10 69.3 105 39.0
Cpa.g.sc17.144 Carica papaya HOM05D002276 ORTHO05D002381 9.0e-10 68.9 109 39.4
Cpa.g.c34878 Carica papaya HOM05D002276 ORTHO05D002381 1.2e-09 68.6 96 40.6
Cpa.g.sc17.131 Carica papaya HOM05D002276 ORTHO05D002381 1.2e-09 68.6 93 38.7
Cpa.g.c27218.2 Carica papaya HOM05D002276 ORTHO05D002381 2.0e-09 67.8 105 39.0
Cpa.g.c31254 Carica papaya HOM05D002276 ORTHO05D002381 2.0e-09 67.8 105 39.0
Cpa.g.sc17.145 Carica papaya HOM05D002276 ORTHO05D002381 4.5e-09 66.6 105 39.0
Cpa.g.sc17.136 Carica papaya HOM05D002276 ORTHO05D002381 5.9e-09 66.2 95 40.0
BcaC01g05892 Brassica carinata HOM05D007973 ORTHO05D011027 7.7e-09 65.9 145 33.1
Cpa.g.c40325 Carica papaya HOM05D002276 ORTHO05D002381 7.7e-09 65.9 105 38.1
Sp4g15420 Schrenkiella parvula HOM05D007973 ORTHO05D011027 1.0e-08 65.5 191 36.6
Atru.chr8.94 Acer truncatum HOM05D002276 ORTHO05D002381 1.3e-08 65.1 86 46.5
Cpa.g.sc736.3 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-08 64.3 85 40.0
TAR623G1532 Trochodendron aralioides HOM05D002276 ORTHO05D002381 3.8e-08 63.5 86 43.0
THA.LOC104806195 Tarenaya hassleriana HOM05D002276 ORTHO05D002381 8.5e-08 62.4 112 39.3
Thecc.04G150200 Theobroma cacao HOM05D002276 ORTHO05D002381 8.5e-08 62.4 97 42.3
MELO3C020014.2 Cucumis melo HOM05D002276 ORTHO05D002381 1.4e-07 61.6 107 41.1
CsaV3_6G002370 Cucumis sativus L. HOM05D002276 ORTHO05D002381 1.4e-07 61.6 107 41.1
Aqoxy4G03275 Aquilegia oxysepala HOM05D002276 ORTHO05D002381 1.9e-07 61.2 94 40.4
Cpa.g.sc17.139 Carica papaya HOM05D007973 ORTHO05D011027 1.9e-07 61.2 71 46.5
Gohir.D09G215100 Gossypium hirsutum HOM05D002276 ORTHO05D002381 1.9e-07 61.2 97 40.2
Gorai.006G235600 Gossypium raimondii HOM05D002276 ORTHO05D002381 1.9e-07 61.2 97 40.2
PGR031G2695 Punica granatum HOM05D002276 ORTHO05D002381 1.9e-07 61.2 89 41.6
TAR369G0520 Trochodendron aralioides HOM05D002276 ORTHO05D002381 1.9e-07 61.2 105 36.2
GSVIVG01030171001 Vitis vinifera HOM05D002276 ORTHO05D002381 1.9e-07 61.2 90 40.0
CARHR133240 Cardamine hirsuta HOM05D002276 ORTHO05D002381 2.5e-07 60.8 97 37.1
Cpa.g.sc17.143 Carica papaya HOM05D007973 ORTHO05D011027 2.5e-07 60.8 80 40.0
Ciclev10011982m.g Citrus clementina HOM05D002276 ORTHO05D002381 2.5e-07 60.8 86 44.2
Cpa.g.c41267 Carica papaya HOM05D002276 ORTHO05D002381 3.2e-07 60.5 92 38.0
Sp4g20900 Schrenkiella parvula HOM05D002276 ORTHO05D002381 3.2e-07 60.5 95 41.1
THA.LOC104823349 Tarenaya hassleriana HOM05D002276 ORTHO05D002381 3.2e-07 60.5 106 37.7
AT2G38560 Arabidopsis thaliana HOM05D002276 ORTHO05D002381 4.2e-07 60.1 97 38.1
Cpa.g.sc956.1 Carica papaya HOM05D002276 ORTHO05D002381 4.2e-07 60.1 103 39.8
Gohir.A09G213664 Gossypium hirsutum HOM05D002276 ORTHO05D002381 4.2e-07 60.1 97 39.2
PSO384G2188 Papaver somniferum HOM05D002276 ORTHO05D002381 5.5e-07 59.7 89 39.3
Potri.006G109300 Populus trichocarpa HOM05D002276 ORTHO05D002381 5.5e-07 59.7 101 35.6
Sp4g15210 Schrenkiella parvula HOM05D007973 ORTHO05D011027 5.5e-07 59.7 270 31.1
Thhalv10016682m.g Eutrema salsugineum HOM05D002276 ORTHO05D002381 7.2e-07 59.3 89 40.4
Sabra06G0085000 Salix brachista HOM05D002276 ORTHO05D002381 7.2e-07 59.3 101 35.6
BcaB02g09184 Brassica carinata HOM05D002276 ORTHO05D002381 9.4e-07 58.9 105 40.0
Cpa.g.sc86.75 Carica papaya HOM05D002276 ORTHO05D002381 9.4e-07 58.9 100 42.0
Manes.09G123400 Manihot esculenta HOM05D002276 ORTHO05D002381 9.4e-07 58.9 90 42.2
Aa31LG5G23370 Aethionema arabicum HOM05D002276 ORTHO05D002381 1.2e-06 58.5 94 37.2
A05p07490 Brassica napus HOM05D002276 ORTHO05D002381 1.2e-06 58.5 94 40.4
BraA05t19714Z Brassica rapa HOM05D002276 ORTHO05D002381 1.2e-06 58.5 94 40.4
Duzib151G1136 Durio zibethinus HOM05D002276 ORTHO05D002381 1.2e-06 58.5 89 42.7
Manes.08G170400 Manihot esculenta HOM05D002276 ORTHO05D002381 1.2e-06 58.5 99 37.4
PSO339G3554 Papaver somniferum HOM05D002276 ORTHO05D002381 1.2e-06 58.5 103 36.9
ClCG11G005630 Citrullus lanatus HOM05D002276 ORTHO05D002381 1.6e-06 58.2 107 39.3
Carub.0004s2055 Capsella rubella HOM05D002276 ORTHO05D002381 2.1e-06 57.8 89 39.3
Nn2g10273 Nelumbo nucifera HOM05D002276 ORTHO05D002381 2.1e-06 57.8 89 40.4
C04p08970 Brassica napus HOM05D002276 ORTHO05D002381 3.6e-06 57.0 94 39.4
COL.COLO4_03929 Corchorus olitorius HOM05D002276 ORTHO05D002381 3.6e-06 57.0 97 39.2
Gohir.D10G112700 Gossypium hirsutum HOM05D002276 ORTHO05D002381 3.6e-06 57.0 97 41.2
Gorai.011G124500 Gossypium raimondii HOM05D002276 ORTHO05D002381 3.6e-06 57.0 97 41.2
MBI15_g39393_MAGBIO Magnolia biondii HOM05D002276 ORTHO05D002381 3.6e-06 57.0 105 37.1
AL4G35840 Arabidopsis lyrata HOM05D002276 ORTHO05D002381 4.6e-06 56.6 97 36.1
DCAR_020154 Daucus carota HOM05D002276 ORTHO05D002381 4.6e-06 56.6 107 37.4
BcaC02g12009 Brassica carinata HOM05D002276 ORTHO05D002381 6.1e-06 56.2 94 39.4
BolC4t22486H Brassica oleracea HOM05D002276 ORTHO05D002381 6.1e-06 56.2 94 39.4
ECA238G3222 Erigeron canadensis HOM05D002276 ORTHO05D002381 6.1e-06 56.2 96 38.5
BcaB01g03676 Brassica carinata HOM05D002276 ORTHO05D002381 7.9e-06 55.8 97 36.1
Cc02_g05240 Coffea canephora HOM05D002276 ORTHO05D002381 7.9e-06 55.8 106 34.9


User provided reference genes

Program Settings