Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 1.4e-187 659.4 325 100.0
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.9e-161 572.0 325 87.4
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 1.8e-147 526.2 327 82.3
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 7.9e-143 510.8 325 80.0
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.1e-141 506.9 327 79.8
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.1e-141 506.9 327 79.8
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 5.7e-141 504.6 326 80.1
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 7.4e-141 504.2 325 79.7
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.3e-140 503.4 325 78.5
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 2.2e-140 502.7 327 78.6
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 1.6e-135 486.5 326 76.7
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 2.7e-135 485.7 326 76.1
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 5.7e-133 478.0 329 75.1
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.0e-113 414.1 337 67.1
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 6.6e-105 384.8 332 60.2
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 6.6e-105 384.8 331 59.8
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 5.6e-104 381.7 326 58.9
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 1.2e-103 380.6 327 59.3
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.1e-103 379.8 329 58.1
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 2.8e-103 379.4 329 60.2
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 2.8e-103 379.4 327 59.9
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 6.1e-103 378.3 327 58.7
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 1.0e-102 377.5 336 58.3
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.4e-102 377.1 333 57.7
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.8e-102 376.7 327 58.7
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.8e-102 376.7 334 57.8
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 2.3e-102 376.3 334 59.3
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 2.3e-102 376.3 336 59.8
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 2.3e-102 376.3 333 58.3
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 4.0e-102 375.6 329 58.7
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 5.2e-102 375.2 335 58.5
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 6.8e-102 374.8 336 58.6
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 1.5e-101 373.6 324 59.6
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 1.5e-101 373.6 331 59.2
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 3.4e-101 372.5 330 59.4
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 7.5e-101 371.3 334 57.2
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 7.5e-101 371.3 335 59.4
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.7e-100 370.2 336 59.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.7e-100 370.2 340 57.6
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 6.4e-100 368.2 334 57.8
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 6.4e-100 368.2 334 56.9
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.1e-99 367.5 335 59.4
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 3.2e-99 365.9 331 58.6
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 5.4e-99 365.2 340 56.8
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 7.0e-99 364.8 334 56.6
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.2e-98 364.0 335 57.3
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.6e-98 363.6 331 57.4
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 1.6e-98 363.6 336 56.5
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 2.0e-98 363.2 338 57.7
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 2.0e-98 363.2 332 58.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 3.5e-98 362.5 329 57.1
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 3.5e-98 362.5 333 56.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 3.5e-98 362.5 326 58.9
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 3.5e-98 362.5 332 59.3
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 5.9e-98 361.7 333 57.7
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 1.0e-97 360.9 333 58.3
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.7e-97 360.1 340 57.4
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.7e-97 360.1 336 57.1
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 6.6e-97 358.2 336 56.8
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 6.6e-97 358.2 336 55.4
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.5e-96 357.1 329 56.8
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.5e-96 357.1 329 56.8
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.9e-96 356.7 331 57.7
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 4.3e-96 355.5 331 57.7
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.6e-96 355.1 371 51.8
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 7.3e-96 354.8 340 54.7
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 7.3e-96 354.8 335 57.0
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.6e-95 353.6 346 55.8
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 2.1e-95 353.2 324 58.3
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 2.1e-95 353.2 326 56.1
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.0e-94 350.9 359 54.0
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 2.3e-94 349.7 332 57.2
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 5.2e-94 348.6 332 54.8
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 1.2e-93 347.4 346 52.3
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.2e-93 347.4 337 56.1
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 7.5e-93 344.7 320 58.8
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 6.4e-92 341.7 329 55.3
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 1.1e-91 340.9 330 55.8
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 1.4e-91 340.5 329 55.3
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 1.9e-91 340.1 332 55.4
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.9e-91 340.1 336 55.4
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 9.5e-88 327.8 323 55.4
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.7e-87 325.5 337 52.2
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 3.1e-86 322.8 329 54.1
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 7.5e-85 318.2 322 52.8
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 6.4e-84 315.1 324 52.2
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 2.1e-82 310.1 312 54.2
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 8.1e-79 298.1 329 52.0
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.8e-78 297.0 329 51.7
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 3.4e-77 292.7 359 46.8
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 3.2e-75 286.2 288 54.2
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 7.1e-75 285.0 330 46.1
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.2e-75 284.6 303 52.5
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.2e-74 284.3 309 51.1
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 3.5e-74 282.7 182 79.7
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.3e-72 275.0 355 44.5
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 5.8e-69 265.4 240 58.3
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 2.4e-67 260.0 320 45.9
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 3.9e-65 252.7 328 45.7
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 6.6e-65 251.9 269 51.3
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.3e-64 249.2 235 56.2
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 4.0e-54 216.1 312 42.3
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 1.3e-52 211.1 463 33.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.3e-49 201.1 339 37.5
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 5.6e-48 195.7 327 38.2
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 3.2e-43 179.9 177 56.5
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.6e-42 177.6 155 58.7
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 2.7e-42 176.8 147 61.9
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 1.1e-32 144.8 125 58.4
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 1.5e-32 144.4 82 84.1
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.0e-29 134.0 146 50.0
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 1.3e-28 131.3 174 45.4
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 8.5e-28 128.6 143 49.0
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.1e-27 128.3 171 42.7
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 1.7e-23 114.4 157 42.0
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 5.5e-19 99.4 58 81.0
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 4.4e-16 89.7 132 42.4
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 1.5e-11 74.7 82 53.7
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 2.5e-11 73.9 68 48.5
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 5.5e-11 72.8 133 36.8
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.8e-09 67.8 57 54.4
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 5.3e-06 56.2 70 45.7
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 7.0e-06 55.8 46 60.9


User provided reference genes

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