Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 1.4e-144 517.7 314 100.0
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 1.2e-132 478.0 314 88.5
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 5.1e-126 456.1 315 90.2
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 1.1e-125 454.9 316 82.0
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 6.9e-123 445.7 316 80.7
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 4.9e-121 439.5 314 83.1
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 1.1e-120 438.3 314 76.1
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 1.1e-120 438.3 314 76.1
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 1.1e-120 438.3 314 76.1
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 7.1e-120 435.6 321 75.7
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 1.7e-118 431.0 316 74.7
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 1.7e-118 431.0 316 74.7
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 3.2e-112 410.2 313 76.4
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 3.5e-103 380.2 319 66.5
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 6.1e-95 352.8 255 72.2
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 1.5e-93 348.2 259 72.6
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 4.8e-92 343.2 249 71.9
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 8.2e-92 342.4 269 67.3
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 5.9e-90 336.3 252 71.0
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 7.7e-90 335.9 238 72.7
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 1.3e-89 335.1 268 66.4
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 2.9e-89 334.0 256 70.3
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 6.5e-89 332.8 250 70.8
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 8.5e-89 332.4 239 73.6
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 8.5e-89 332.4 240 73.3
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 1.1e-88 332.0 239 73.6
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 5.5e-88 329.7 256 70.7
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 5.5e-88 329.7 235 71.1
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 7.2e-88 329.3 246 68.7
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 7.2e-88 329.3 235 72.3
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 2.7e-87 327.4 236 72.9
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 7.9e-87 325.9 247 68.8
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 1.0e-86 325.5 236 71.6
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 1.0e-86 325.5 239 71.5
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.4e-86 325.1 250 69.2
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.4e-86 325.1 250 69.2
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 1.4e-86 325.1 235 72.8
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 1.8e-86 324.7 256 66.4
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 2.3e-86 324.3 235 70.6
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 3.9e-86 323.6 236 71.6
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 5.1e-86 323.2 256 68.8
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 5.1e-86 323.2 256 66.0
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 8.8e-86 322.4 235 70.2
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 8.8e-86 322.4 236 71.6
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 8.8e-86 322.4 257 67.7
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 1.1e-85 322.0 257 65.0
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 4.3e-85 320.1 255 66.3
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 7.4e-85 319.3 245 68.2
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 7.4e-85 319.3 248 66.9
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 9.7e-85 318.9 250 65.2
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 3.7e-84 317.0 256 64.8
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 4.8e-84 316.6 248 66.1
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.8e-83 314.7 254 63.4
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 2.4e-83 314.3 247 65.6
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 3.1e-83 313.9 255 63.5
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 5.3e-83 313.2 254 63.4
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 9.1e-83 312.4 249 65.1
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 9.1e-83 312.4 251 67.3
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 3.4e-82 310.5 233 68.2
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 4.5e-82 310.1 233 68.2
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 7.7e-82 309.3 254 64.2
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 1.0e-81 308.9 248 65.3
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 2.9e-81 307.4 254 62.6
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 2.9e-81 307.4 254 62.6
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 3.8e-81 307.0 248 64.1
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 5.0e-81 306.6 246 64.2
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 5.0e-81 306.6 252 64.7
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 8.5e-81 305.8 235 68.1
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 1.1e-80 305.4 243 65.8
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 1.4e-80 305.1 252 63.5
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 3.2e-80 303.9 258 63.2
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 5.5e-80 303.1 252 62.7
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 2.7e-79 300.8 247 63.2
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 3.6e-79 300.4 250 62.8
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 4.7e-79 300.1 248 63.7
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 4.7e-79 300.1 244 63.1
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 4.7e-79 300.1 253 62.8
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 1.0e-78 298.9 245 64.5
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 1.8e-78 298.1 252 62.3
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 3.0e-78 297.4 248 64.1
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 3.0e-78 297.4 244 61.9
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 2.6e-77 294.3 249 62.2
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 4.4e-77 293.5 254 61.8
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 9.7e-77 292.4 252 61.5
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 9.7e-77 292.4 253 61.3
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 3.7e-76 290.4 242 62.8
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 4.8e-76 290.0 242 62.8
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 3.1e-75 287.3 248 62.9
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.3e-75 286.6 215 69.3
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 1.3e-73 282.0 252 60.7
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 1.7e-73 281.6 233 63.1
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 2.9e-73 280.8 247 59.9
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 8.5e-73 279.3 234 65.0
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 4.7e-71 273.5 251 58.2
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 2.3e-70 271.2 206 68.4
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 4.8e-68 263.5 246 57.3
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 8.2e-68 262.7 251 55.8
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 2.4e-67 261.2 252 55.2
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 2.8e-60 237.7 154 77.9
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 9.4e-56 222.6 167 71.9
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 3.6e-47 194.1 149 65.1
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 3.4e-45 187.6 171 58.5
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 1.5e-40 172.2 245 41.6
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 1.7e-33 148.7 197 42.6
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 2.3e-30 138.3 183 43.2
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 5.8e-21 107.1 201 34.3
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 7.6e-21 106.7 241 34.0
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 1.7e-20 105.5 185 31.9
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 4.1e-19 100.9 173 34.1
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 2.7e-18 98.2 247 32.0
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 4.6e-10 70.9 64 53.1
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 5.6e-08 63.9 212 27.8
Nn6g35263 Nelumbo nucifera HOM05D000001 ORTHO05D000003 6.9e-06 57.0 181 28.2


User provided reference genes

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