Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.5e-267 924.9 460 100.0
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 4.6e-253 877.5 460 94.3
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 3.6e-242 841.3 459 91.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.0e-240 835.5 461 91.5
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.0e-228 795.0 461 87.4
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 8.1e-226 786.9 461 86.1
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-219 766.5 463 84.2
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 4.8e-218 761.1 462 84.4
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.3e-215 753.1 463 83.6
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 6.4e-215 750.7 463 81.9
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 4.2e-214 748.0 463 82.9
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 3.0e-204 715.3 460 80.9
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 5.7e-187 657.9 460 73.5
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 8.0e-157 557.8 458 60.5
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 1.0e-156 557.4 454 61.5
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 3.0e-156 555.8 458 60.3
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.6e-155 552.7 459 60.8
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.4e-155 552.0 466 59.9
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 2.2e-154 549.7 458 59.4
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.8e-154 549.3 468 58.8
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 4.9e-154 548.5 457 58.6
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 6.3e-154 548.1 459 60.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.4e-153 547.0 457 59.1
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.8e-153 546.6 457 59.1
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 2.4e-153 546.2 451 62.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 4.1e-153 545.4 457 59.3
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 7.0e-153 544.7 467 59.7
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 9.2e-153 544.3 450 60.7
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 1.6e-152 543.5 464 60.1
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.0e-152 543.1 471 59.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.7e-152 542.7 461 60.1
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.0e-151 540.8 457 58.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 2.3e-151 539.7 461 61.6
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.5e-150 536.2 458 58.7
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 4.3e-150 535.4 458 58.1
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 7.3e-150 534.6 461 58.4
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 7.3e-150 534.6 461 58.4
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.1e-149 533.1 457 58.6
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 2.8e-149 532.7 471 58.6
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.4e-148 530.4 449 59.9
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.0e-148 529.3 463 58.5
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.0e-147 526.6 473 57.5
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.0e-147 526.6 463 58.3
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 3.4e-147 525.8 466 57.5
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.3e-146 523.9 463 58.1
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 2.2e-146 523.1 456 58.8
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 7.0e-145 518.1 440 58.9
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 3.5e-144 515.8 469 57.4
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 4.6e-144 515.4 474 57.0
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 7.8e-144 514.6 445 58.7
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 5.0e-143 511.9 477 55.8
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.5e-142 510.4 477 55.8
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 3.3e-142 509.2 461 57.5
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 9.5e-142 507.7 469 56.9
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.2e-141 507.3 470 57.0
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.1e-141 506.5 474 55.9
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 6.2e-141 505.0 480 54.8
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.8e-140 503.4 558 48.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.2e-139 500.7 473 56.0
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 5.8e-139 498.4 464 55.6
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.7e-138 496.9 490 52.7
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.7e-138 496.9 463 55.7
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 2.9e-138 496.1 502 52.4
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.9e-138 495.4 467 55.5
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 4.9e-138 495.4 466 55.8
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.9e-138 495.4 468 56.0
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 6.4e-138 495.0 433 58.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.4e-137 493.8 459 54.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.4e-137 493.8 433 58.0
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 1.9e-137 493.4 516 52.5
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 4.1e-137 492.3 467 54.4
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 4.1e-137 492.3 396 60.9
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.6e-136 490.3 458 55.9
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.0e-136 490.0 475 54.3
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 3.5e-136 489.2 372 67.5
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 1.7e-135 486.9 481 53.2
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 2.5e-134 483.0 446 56.5
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.8e-133 479.6 499 52.3
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 4.0e-132 475.7 478 53.8
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 7.5e-131 471.5 465 54.4
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 4.9e-130 468.8 468 53.2
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 7.1e-129 464.9 476 51.1
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 9.2e-129 464.5 388 60.6
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.1e-126 457.6 438 53.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 4.4e-123 445.7 470 50.9
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.2e-122 443.4 507 47.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 6.4e-122 441.8 448 52.2
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 6.6e-119 431.8 469 48.8
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 3.3e-118 429.5 449 58.1
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 9.6e-118 427.9 377 57.6
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.2e-115 421.0 337 63.8
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 8.1e-109 398.3 362 57.7
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 4.5e-107 392.5 464 48.1
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.9e-106 389.8 467 47.5
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.6e-104 384.0 321 60.7
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 7.9e-104 381.7 450 48.9
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.3e-98 364.4 399 49.6
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.9e-97 360.5 349 53.9
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.9e-97 360.5 349 53.9
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 2.3e-95 353.6 480 41.0
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.4e-91 339.7 289 59.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 1.9e-89 334.0 341 51.3
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 4.6e-88 329.3 461 41.2
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 1.5e-86 324.3 294 57.1
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.1e-76 291.6 348 44.0
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 5.3e-76 289.3 234 60.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.4e-71 274.6 230 58.3
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.3e-70 270.0 497 35.6
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.8e-68 264.2 454 39.6
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 2.7e-64 250.4 349 42.1
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 7.9e-64 248.8 160 81.2
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 7.9e-64 248.8 160 81.2
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.4e-63 248.1 149 82.6
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.2e-54 218.4 378 39.2
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.6e-54 217.2 298 41.3
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.2e-51 208.4 174 62.6
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.3e-50 204.9 233 48.5
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.4e-46 189.9 223 48.9
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 5.0e-42 176.4 168 54.2
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 4.4e-38 163.3 158 50.0
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.7e-38 162.9 423 29.6
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 5.4e-36 156.4 147 55.1
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.3e-34 151.8 172 49.4
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 8.3e-29 132.5 112 61.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.1e-23 115.5 492 26.0
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.3e-23 114.4 116 51.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-16 92.0 105 48.6
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 1.2e-14 85.5 105 42.9
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 7.1e-12 76.3 67 59.7
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.5e-11 73.9 119 41.2
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.9e-10 70.5 52 67.3
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.6e-10 69.7 52 67.3


User provided reference genes

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