Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G23290 Arabidopsis lyrata HOM05D000689 ORTHO05D015927 2.8e-28 127.9 64 100.0
AL6G23310 Arabidopsis lyrata HOM05D000310 ORTHO05D002456 2.8e-28 127.9 64 100.0
AL6G23340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.8e-28 127.9 64 100.0
AT5G12450 Arabidopsis thaliana HOM05D000689 ORTHO05D015927 3.3e-24 114.4 62 91.9
Carub.0006s1098 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-20 102.4 65 80.0
AL1G54370 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 8.3e-20 99.8 63 77.8
A08p05370 Brassica napus HOM05D000689 ORTHO05D000015 8.3e-20 99.8 67 79.1
Thhalv10012238m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 8.3e-20 99.8 64 79.7
Carub.0001s3703 Capsella rubella HOM05D000689 ORTHO05D000015 3.2e-19 97.8 67 76.1
BolC8t47432H Brassica oleracea HOM05D000689 ORTHO05D000015 5.4e-19 97.1 66 75.8
CARHR038010 Cardamine hirsuta HOM05D000689 ORTHO05D015927 5.4e-19 97.1 64 75.0
C08p05800 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-18 95.9 66 74.2
C08p05810 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-18 95.9 66 74.2
C08p05820 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-18 95.9 66 74.2
Thhalv10013291m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.2e-18 95.9 64 75.0
AT1G48400 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.5e-18 94.4 65 69.2
CARHR228580 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.6e-18 94.0 64 76.6
AL1G25030 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.9e-18 93.6 66 74.2
AL1G25040 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.9e-18 93.6 66 74.2
A10p28240 Brassica napus HOM05D000689 ORTHO05D000015 1.0e-17 92.8 63 71.4
CARHR270010 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.0e-17 92.8 62 72.6
AT1G48390 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.3e-17 91.7 64 76.6
BolC8t47383H Brassica oleracea HOM05D000689 ORTHO05D000015 2.3e-17 91.7 67 74.6
BraA05t19060Z Brassica rapa HOM05D000689 ORTHO05D000015 3.0e-17 91.3 65 72.3
BcaB04g17472 Brassica carinata HOM05D000689 ORTHO05D000015 3.9e-17 90.9 66 71.2
BcaB05g24984 Brassica carinata HOM05D000689 ORTHO05D000015 3.9e-17 90.9 67 68.7
BcaC04g18682 Brassica carinata HOM05D000689 ORTHO05D000015 3.9e-17 90.9 63 69.8
Carub.0001s3702 Capsella rubella HOM05D000689 ORTHO05D000015 3.9e-17 90.9 65 72.3
Carub.0001s3751 Capsella rubella HOM05D000689 ORTHO05D000015 3.9e-17 90.9 64 68.8
BolC8t47379H Brassica oleracea HOM05D000689 ORTHO05D015927 5.0e-17 90.5 64 67.2
Thhalv10022030m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.0e-17 90.5 64 73.4
BcaC06g31360 Brassica carinata HOM05D000689 ORTHO05D000015 8.6e-17 89.7 64 67.2
A05p00630 Brassica napus HOM05D000689 ORTHO05D000015 8.6e-17 89.7 65 73.8
A10p21080 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-16 89.4 63 68.3
BraA10t44173Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-16 89.4 63 68.3
C02p33160 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-16 89.0 65 73.8
BcaC04g18680 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-16 88.6 63 68.3
BcaNung02239 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-16 88.6 64 68.8
C09p58110 Brassica napus HOM05D000689 ORTHO05D000015 1.9e-16 88.6 63 68.3
BolC9t58670H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-16 88.6 63 68.3
BolC9t58682H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-16 88.6 63 68.3
A03p19160 Brassica napus HOM05D000689 ORTHO05D000015 2.5e-16 88.2 64 64.1
BcaC03g15665 Brassica carinata HOM05D000689 ORTHO05D000015 3.3e-16 87.8 64 68.8
C02p33100 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-16 87.8 64 68.8
BolC2t09386H Brassica oleracea HOM05D000689 ORTHO05D000015 3.3e-16 87.8 64 68.8
BraA02t07095Z Brassica rapa HOM05D000689 ORTHO05D000015 3.3e-16 87.8 64 68.8
BraA09t38386Z Brassica rapa HOM05D000689 ORTHO05D000015 3.3e-16 87.8 64 68.8
CARHR039590 Cardamine hirsuta HOM05D000689 ORTHO05D015927 5.6e-16 87.0 64 67.2
AT1G64540 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 7.3e-16 86.7 64 68.8
BcaC09g51333 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-16 86.7 66 62.1
BcaC09g51335 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-16 86.7 66 62.1
BcaC09g51338 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-16 86.7 66 62.1
BcaC09g51340 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-16 86.7 66 62.1
C01p14120 Brassica napus HOM05D000689 ORTHO05D000015 7.3e-16 86.7 66 62.1
BcaNung01794 Brassica carinata HOM05D000689 ORTHO05D000015 9.5e-16 86.3 67 64.2
BraA02t07087Z Brassica rapa HOM05D000689 ORTHO05D000015 9.5e-16 86.3 65 72.3
BraA02t07091Z Brassica rapa HOM05D000689 ORTHO05D000015 9.5e-16 86.3 65 72.3
BraA08t32542Z Brassica rapa HOM05D000689 ORTHO05D000015 9.5e-16 86.3 59 78.0
A02p20610 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-15 85.9 64 67.2
BolC1t01378H Brassica oleracea HOM05D000689 ORTHO05D000015 1.2e-15 85.9 67 64.2
BolC4t22009H Brassica oleracea HOM05D000689 ORTHO05D000015 1.2e-15 85.9 65 75.4
BcaC02g12583 Brassica carinata HOM05D000689 ORTHO05D000015 1.6e-15 85.5 65 70.8
CARHR038000 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.6e-15 85.5 65 69.2
AL7G25770 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.8e-15 84.7 64 64.1
C04p00680 Brassica napus HOM05D000689 ORTHO05D000015 2.8e-15 84.7 65 72.3
C08p05740 Brassica napus HOM05D000689 ORTHO05D015927 2.8e-15 84.7 58 75.9
CARHR252580 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.8e-15 84.7 64 70.3
AT1G47920 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.6e-15 84.3 63 69.8
AT4G27050 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.6e-15 84.3 64 62.5
A01p12240 Brassica napus HOM05D000689 ORTHO05D000015 3.6e-15 84.3 67 62.7
BraA01t01165Z Brassica rapa HOM05D000689 ORTHO05D000015 3.6e-15 84.3 67 62.7
BcaB03g15811 Brassica carinata HOM05D000689 ORTHO05D000015 4.7e-15 84.0 64 73.4
BcaB01g06363 Brassica carinata HOM05D000689 ORTHO05D000015 6.2e-15 83.6 62 59.7
BcaB07g30958 Brassica carinata HOM05D000689 ORTHO05D000015 6.2e-15 83.6 67 62.7
BcaC09g51214 Brassica carinata HOM05D000689 ORTHO05D015927 6.2e-15 83.6 64 64.1
A01p13010 Brassica napus HOM05D000689 ORTHO05D015927 6.2e-15 83.6 64 64.1
BolC8t47424H Brassica oleracea HOM05D000689 ORTHO05D000015 6.2e-15 83.6 58 74.1
BraA01t01243Z Brassica rapa HOM05D000689 ORTHO05D000015 6.2e-15 83.6 64 64.1
C01p15690 Brassica napus HOM05D000689 ORTHO05D015927 1.0e-14 82.8 64 65.6
BolC1t01522H Brassica oleracea HOM05D000397 ORTHO05D002023 1.0e-14 82.8 64 65.6
BolC4t21701H Brassica oleracea HOM05D000689 ORTHO05D000015 1.0e-14 82.8 65 70.8
Thhalv10025182m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.8e-14 82.0 64 62.5
AL7G44920 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.1e-14 81.3 64 65.6
BcaC02g12585 Brassica carinata HOM05D000689 ORTHO05D000015 3.1e-14 81.3 59 69.5
Carub.0007s3312 Capsella rubella HOM05D000689 ORTHO05D000015 6.8e-14 80.1 65 63.1
BcaC05g27966 Brassica carinata HOM05D000689 ORTHO05D032523 1.5e-13 79.0 64 59.4
BcaNung04095 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-13 79.0 64 62.5
BolC5t32714H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-13 79.0 64 59.4
AT5G35995 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.9e-12 74.7 64 60.9
C08p22010 Brassica napus HOM05D000689 ORTHO05D020106 4.9e-12 73.9 65 63.1
BolC8t49841H Brassica oleracea HOM05D000689 ORTHO05D020106 4.9e-12 73.9 65 63.1
Carub.0007s3428 Capsella rubella HOM05D000689 ORTHO05D000015 1.1e-11 72.8 65 60.0
C08p43820 Brassica napus HOM05D000689 ORTHO05D020106 1.4e-11 72.4 64 56.2
BolC8t51931H Brassica oleracea HOM05D000689 ORTHO05D020106 1.4e-11 72.4 64 56.2
CARHR151510 Cardamine hirsuta HOM05D000689 ORTHO05D000015 9.2e-11 69.7 66 56.1
BcaB01g03146 Brassica carinata HOM05D000689 ORTHO05D000015 4.6e-10 67.4 72 50.0
AL5G40760 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.0e-09 66.2 62 53.2
C04p47380 Brassica napus HOM05D000689 ORTHO05D000015 1.0e-09 66.2 62 51.6
AL4G24650 Arabidopsis lyrata HOM05D000689 ORTHO05D019707 1.3e-09 65.9 71 53.5
Thhalv10027779m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.3e-09 65.9 61 50.8
AT2G42730 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.7e-09 65.5 63 52.4
AT3G58920 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.0e-09 64.7 62 51.6
Carub.0004s1100 Capsella rubella HOM05D000689 ORTHO05D000015 3.0e-09 64.7 73 54.8
Thhalv10016490m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.9e-09 64.3 72 54.2
BcaB01g02231 Brassica carinata HOM05D000689 ORTHO05D000015 5.0e-09 63.9 46 69.6
BcaC02g11071 Brassica carinata HOM05D000689 ORTHO05D000015 5.0e-09 63.9 72 47.2
C04p20820 Brassica napus HOM05D040039 ORTHO05D000015 5.0e-09 63.9 72 47.2
BolC4t26341H Brassica oleracea HOM05D000689 ORTHO05D000015 5.0e-09 63.9 62 48.4
Carub.0004s1101 Capsella rubella HOM05D000689 ORTHO05D000015 5.0e-09 63.9 71 46.5
Carub.0005s2571 Capsella rubella HOM05D000689 ORTHO05D000015 5.0e-09 63.9 63 50.8
AL1G55020 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.6e-09 63.5 44 70.5
BcaB06g27529 Brassica carinata HOM05D000689 ORTHO05D000015 6.6e-09 63.5 62 50.0
AL3G24690 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 8.6e-09 63.2 66 54.5
BcaB02g07944 Brassica carinata HOM05D000689 ORTHO05D000015 8.6e-09 63.2 62 48.4
CARHR169320 Cardamine hirsuta HOM05D000689 ORTHO05D000015 8.6e-09 63.2 63 54.0
AL7G31340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.1e-08 62.8 61 50.8
AT4G22280 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.1e-08 62.8 63 52.4
A04p13600 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-08 62.8 62 50.0
BraA04t17021Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-08 62.8 62 50.0
AT3G58960 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.5e-08 62.4 62 56.5
A05p15520 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-08 62.4 72 47.2
BolC9t58677H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-08 62.4 34 82.4
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 1.9e-08 62.0 72 48.6
Thhalv10016687m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.9e-08 62.0 63 50.8
BraA04t17807Z Brassica rapa HOM05D000689 ORTHO05D000015 2.5e-08 61.6 72 50.0
BraA05t20468Z Brassica rapa HOM05D000689 ORTHO05D000015 2.5e-08 61.6 72 47.2
AL5G40720 Arabidopsis lyrata HOM05D000689 ORTHO05D015927 3.3e-08 61.2 63 47.6
AL5G40870 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.3e-08 61.2 62 53.2
Thhalv10006370m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.3e-08 61.2 63 54.0
AL5G40860 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.3e-08 60.8 62 45.2
Sp7g01320 Schrenkiella parvula HOM05D000689 ORTHO05D000015 4.3e-08 60.8 62 50.0
AL1G35400 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.6e-08 60.5 71 52.1
AL1G53180 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.6e-08 60.5 71 52.1
AL4G41310 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.6e-08 60.5 66 51.5
Thhalv10027744m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.6e-08 60.5 61 45.9
CARHR198640 Cardamine hirsuta HOM05D000689 ORTHO05D000015 7.3e-08 60.1 63 49.2
AL5G45240 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 9.5e-08 59.7 61 45.9
CARHR123150 Cardamine hirsuta HOM05D000689 ORTHO05D000015 9.5e-08 59.7 67 55.2
AT2G29930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.2e-07 59.3 71 45.1
A04p22620 Brassica napus HOM05D000689 ORTHO05D000015 1.6e-07 58.9 72 48.6
BolC4t23612H Brassica oleracea HOM05D000689 ORTHO05D000015 1.6e-07 58.9 74 45.9
AL7G46170 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.1e-07 58.5 66 48.5
C01p32180 Brassica napus HOM05D000689 ORTHO05D000015 2.1e-07 58.5 61 54.1
BolC4t21702H Brassica oleracea HOM05D000689 ORTHO05D000015 2.1e-07 58.5 48 70.8
BcaB06g28328 Brassica carinata HOM05D000689 ORTHO05D000015 2.8e-07 58.2 72 50.0
AL5G40670 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.6e-07 57.8 62 48.4
AT3G62440 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.6e-07 57.8 63 46.0
AT1G21990 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.7e-07 57.4 71 45.1
C06p19130 Brassica napus HOM05D000689 ORTHO05D000015 4.7e-07 57.4 62 45.2
BolC6t37112H Brassica oleracea HOM05D000689 ORTHO05D000015 4.7e-07 57.4 62 45.2
CARHR123070 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.7e-07 57.4 71 46.5
Sp4g12490 Schrenkiella parvula HOM05D000689 ORTHO05D000015 4.7e-07 57.4 70 48.6
AL5G23280 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.2e-07 57.0 66 50.0
Carub.0006s0530 Capsella rubella HOM05D000689 ORTHO05D000015 6.2e-07 57.0 65 50.8
BcaB06g28329 Brassica carinata HOM05D000689 ORTHO05D000015 8.1e-07 56.6 72 43.1
Carub.0007s3253 Capsella rubella HOM05D000689 ORTHO05D000015 1.1e-06 56.2 67 49.3
AL6G16510 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.4e-06 55.8 64 48.4
AT3G59150 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.4e-06 55.8 62 46.8
A03p53420 Brassica napus HOM05D000234 ORTHO05D013660 1.8e-06 55.5 61 50.8
C02p07210 Brassica napus HOM05D000689 ORTHO05D021620 1.8e-06 55.5 62 48.4
BolC2t06653H Brassica oleracea HOM05D000689 ORTHO05D021620 1.8e-06 55.5 62 48.4
BcaB08g34722 Brassica carinata HOM05D000689 ORTHO05D039974 2.3e-06 55.1 61 41.0
CARHR229180 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.3e-06 55.1 63 49.2
AT5G15620 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.1e-06 54.7 62 43.5
BcaC03g13456 Brassica carinata HOM05D000689 ORTHO05D021620 4.0e-06 54.3 61 45.9
C02p07200 Brassica napus HOM05D000689 ORTHO05D000015 4.0e-06 54.3 61 45.9
BolC2t06652H Brassica oleracea HOM05D000689 ORTHO05D000015 4.0e-06 54.3 61 45.9
AL5G45250 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.2e-06 53.9 61 44.3
CARHR215660 Cardamine hirsuta HOM05D000689 ORTHO05D000015 5.2e-06 53.9 65 47.7
AL7G49940 Arabidopsis lyrata HOM05D000689 ORTHO05D017417 6.8e-06 53.5 64 43.8
AT5G40050 Arabidopsis thaliana HOM05D000689 ORTHO05D017417 6.8e-06 53.5 65 44.6
BcaB06g28159 Brassica carinata HOM05D000689 ORTHO05D000015 6.8e-06 53.5 71 45.1
BcaNung03106 Brassica carinata HOM05D000689 ORTHO05D021620 6.8e-06 53.5 62 45.2
C05p39730 Brassica napus HOM05D000689 ORTHO05D032523 6.8e-06 53.5 39 59.0
A04p21060 Brassica napus HOM05D000689 ORTHO05D000015 8.9e-06 53.1 72 43.1
A04p22630 Brassica napus HOM05D000689 ORTHO05D000015 8.9e-06 53.1 64 46.9
BraA04t17808Z Brassica rapa HOM05D000689 ORTHO05D000015 8.9e-06 53.1 64 46.9
Carub.0007s3560 Capsella rubella HOM05D000689 ORTHO05D000015 8.9e-06 53.1 64 39.1


User provided reference genes

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