Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 6.2e-149 530.8 273 100.0
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.4e-145 519.6 273 98.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.1e-144 515.8 274 98.2
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 2.7e-144 515.4 273 96.0
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 7.9e-144 513.8 273 96.0
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.0e-143 513.5 272 96.0
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 1.1e-142 510.0 272 95.6
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 1.1e-142 510.0 273 95.6
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 2.1e-141 505.8 273 95.2
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.1e-141 505.8 286 92.0
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.1e-140 503.4 271 95.6
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 3.1e-140 501.9 273 94.9
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.2e-139 500.0 271 94.1
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 8.4e-138 493.8 272 93.4
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.8e-135 486.1 271 91.9
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.3e-135 485.7 272 91.9
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.5e-134 482.3 272 91.2
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.4e-129 466.5 270 88.5
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.0e-123 446.0 274 84.7
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 5.9e-123 444.5 274 84.7
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 4.2e-121 438.3 271 81.5
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 9.4e-121 437.2 234 97.4
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.2e-120 436.8 271 82.3
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.2e-120 436.8 271 81.2
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 2.7e-120 435.6 271 81.9
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 1.0e-119 433.7 319 74.0
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.8e-119 433.0 273 80.2
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.9e-119 431.8 271 81.2
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.9e-119 431.8 271 81.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 3.9e-119 431.8 271 80.4
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 6.7e-119 431.0 270 81.1
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 8.8e-119 430.6 277 82.3
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 8.8e-119 430.6 234 94.9
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.0e-118 429.5 270 78.9
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 3.3e-118 428.7 271 78.6
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 4.3e-118 428.3 273 80.2
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.7e-117 426.4 271 78.6
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 1.7e-117 426.4 273 78.8
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 6.3e-117 424.5 271 78.6
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 1.1e-116 423.7 271 79.0
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.1e-116 422.2 277 82.7
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 6.9e-116 421.0 271 76.8
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.2e-115 420.2 271 79.0
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.5e-115 419.9 271 76.4
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.0e-115 419.5 271 78.6
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.6e-115 419.1 271 76.4
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.5e-115 418.3 271 79.7
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.5e-115 418.3 271 78.6
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 4.5e-115 418.3 271 78.6
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 5.9e-115 417.9 271 77.1
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.0e-114 417.2 271 79.0
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.3e-114 416.8 271 79.3
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 1.3e-114 416.8 273 75.5
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 2.9e-114 415.6 271 74.5
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 3.8e-114 415.2 273 78.0
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 5.0e-114 414.8 271 77.5
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.4e-113 413.3 271 77.9
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 1.9e-113 412.9 273 76.6
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-113 412.1 271 75.3
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-113 412.1 271 75.3
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.5e-113 411.4 272 77.2
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.5e-113 411.4 281 74.7
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 7.2e-113 411.0 272 75.4
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 7.2e-113 411.0 271 75.3
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 9.4e-113 410.6 284 73.9
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 2.1e-112 409.5 272 76.5
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 2.7e-112 409.1 296 72.3
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 2.7e-112 409.1 272 74.6
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 7.9e-112 407.5 271 73.4
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.0e-111 407.1 272 76.1
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.8e-111 406.4 269 73.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 5.1e-111 404.8 269 73.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 5.1e-111 404.8 273 76.2
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 6.7e-111 404.4 271 72.0
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 8.8e-111 404.1 272 74.6
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 8.8e-111 404.1 272 73.9
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.1e-110 403.7 271 74.2
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.0e-110 402.9 271 73.8
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 5.7e-110 401.4 271 71.2
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 2.4e-108 396.0 274 73.4
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.2e-107 393.7 265 81.1
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 3.8e-106 388.7 271 74.2
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 4.2e-105 385.2 271 73.4
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 5.5e-105 384.8 271 73.4
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 9.4e-105 384.0 273 71.1
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 9.4e-105 384.0 299 67.9
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 1.2e-104 383.6 283 70.0
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.1e-104 382.9 272 72.1
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 2.1e-104 382.9 271 73.1
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.1e-104 382.9 274 72.3
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.7e-104 382.5 272 71.7
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.7e-104 382.5 273 72.9
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 4.7e-104 381.7 330 61.2
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 8.0e-104 380.9 273 71.8
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 8.0e-104 380.9 273 71.8
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 8.0e-104 380.9 273 71.4
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.4e-103 380.2 273 71.1
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.1e-102 377.1 257 76.7
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-102 377.1 287 70.0
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 1.5e-102 376.7 273 72.9
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 4.4e-102 375.2 271 73.1
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 5.7e-102 374.8 273 71.8
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.3e-101 373.6 277 71.8
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.7e-101 373.2 341 58.9
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 2.8e-101 372.5 274 70.4
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 2.8e-101 372.5 306 64.1
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 2.8e-101 372.5 306 64.1
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 4.8e-101 371.7 234 81.2
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 6.3e-101 371.3 293 64.2
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 6.3e-101 371.3 268 70.5
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 1.8e-100 369.8 237 79.3
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 5.3e-100 368.2 271 70.8
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 9.1e-100 367.5 273 72.9
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 4.5e-99 365.2 254 72.0
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 1.9e-97 359.8 276 69.2
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 1.9e-97 359.8 262 71.8
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 3.2e-97 359.0 273 69.6
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.0e-96 354.4 232 78.0
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 9.7e-94 347.4 274 68.2
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 9.7e-94 347.4 332 59.0
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.3e-93 347.1 273 65.2
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 2.8e-93 345.9 274 68.2
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 1.2e-88 330.5 269 65.4
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 8.0e-88 327.8 231 72.3
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 4.0e-87 325.5 242 70.7
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 6.8e-87 324.7 279 64.5
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 8.8e-87 324.3 236 69.9
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 8.3e-85 317.8 274 61.7
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 5.0e-82 308.5 360 52.2
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 7.2e-81 304.7 285 59.6
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 9.5e-81 304.3 232 69.0
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 3.0e-79 299.3 271 62.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 7.5e-78 294.7 338 51.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 2.2e-77 293.1 291 56.4
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.4e-76 289.7 269 60.6
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 5.9e-75 285.0 236 68.2
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 4.0e-71 272.3 201 71.1
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 2.6e-70 269.6 173 77.5
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 8.3e-69 264.6 231 60.6
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 1.4e-68 263.8 165 82.4
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 7.0e-68 261.5 181 74.6
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 2.0e-67 260.0 268 55.6
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 4.6e-67 258.8 174 75.3
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 5.0e-66 255.4 276 52.2
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 8.6e-66 254.6 270 52.6
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 7.3e-65 251.5 203 67.0
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.2e-64 250.8 158 82.3
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 4.7e-64 248.8 229 61.6
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.8e-63 246.9 271 52.4
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 5.2e-63 245.4 172 69.2
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 5.2e-63 245.4 262 53.4
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 4.4e-62 242.3 262 51.9
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.2e-59 234.2 164 75.6
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 2.1e-56 223.4 161 67.7
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 4.4e-54 215.7 257 52.5
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 3.2e-52 209.5 169 65.7
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.1e-51 206.8 125 81.6
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 4.6e-51 205.7 131 77.1
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 9.6e-49 198.0 214 51.9
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 3.6e-48 196.1 232 51.7
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 7.6e-46 188.3 151 65.6
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 2.2e-45 186.8 236 47.5
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.7e-43 179.9 203 53.2
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 5.6e-41 172.2 133 71.4
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 4.6e-35 152.5 273 37.7
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 6.6e-34 148.7 138 56.5
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 8.7e-34 148.3 179 49.7
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.6e-32 142.9 163 52.1
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 3.5e-27 126.3 88 70.5
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.3e-26 124.4 90 68.9
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 2.3e-26 123.6 151 53.6
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.6e-24 117.5 74 77.0
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.2e-21 107.1 70 71.4
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.4e-20 104.4 174 39.1
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.3e-18 97.1 69 69.6
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 1.1e-17 94.7 74 63.5
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.3e-10 70.5 138 37.0
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.9e-09 67.4 210 31.4
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 7.4e-09 65.5 41 75.6
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.8e-08 63.5 41 75.6
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.1e-07 60.1 34 82.4


User provided reference genes

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