Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.7e-50 202.6 122 100.0
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 2.1e-35 152.5 115 83.5
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 9.6e-33 143.7 115 86.1
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 5.2e-31 137.9 115 82.6
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 9.9e-30 133.7 113 80.5
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.1e-28 130.2 118 65.3
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 1.6e-27 126.3 113 77.9
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.6e-27 126.3 115 75.7
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 1.6e-27 126.3 115 73.0
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 2.1e-27 125.9 115 72.2
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.0e-26 123.6 113 73.5
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.0e-26 123.6 113 73.5
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.0e-26 123.6 115 64.3
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-26 123.2 115 76.5
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 1.7e-26 122.9 115 76.5
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.7e-26 122.9 113 74.3
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.0e-26 122.1 113 72.6
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 3.0e-26 122.1 115 72.2
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 3.9e-26 121.7 115 70.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 6.6e-26 120.9 113 57.5
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 8.7e-26 120.6 115 74.8
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 8.7e-26 120.6 115 73.9
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 8.7e-26 120.6 115 59.1
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 8.7e-26 120.6 115 57.4
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 8.7e-26 120.6 115 57.4
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 8.7e-26 120.6 113 71.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 1.1e-25 120.2 113 69.9
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 1.5e-25 119.8 118 75.4
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.9e-25 119.4 115 71.3
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 1.9e-25 119.4 111 68.5
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-25 119.0 113 72.6
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-25 119.0 113 72.6
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 2.5e-25 119.0 111 73.0
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.5e-25 119.0 115 69.6
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 2.5e-25 119.0 113 65.5
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.5e-25 119.0 118 70.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 3.3e-25 118.6 115 75.7
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 3.3e-25 118.6 115 75.7
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 3.3e-25 118.6 115 65.2
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.3e-25 118.2 115 73.9
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.3e-25 118.2 115 70.4
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 4.3e-25 118.2 121 66.9
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 4.3e-25 118.2 113 70.8
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 5.6e-25 117.9 115 71.3
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 7.3e-25 117.5 115 62.6
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 7.3e-25 117.5 115 71.3
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 7.3e-25 117.5 115 71.3
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.6e-24 116.3 115 54.8
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.6e-24 116.3 115 65.2
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 2.1e-24 115.9 114 70.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.1e-24 115.9 115 67.0
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.1e-24 115.9 118 67.8
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 2.8e-24 115.5 109 68.8
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 3.6e-24 115.2 122 67.2
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 4.8e-24 114.8 115 73.0
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 4.8e-24 114.8 111 71.2
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.8e-24 114.8 113 67.3
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 6.2e-24 114.4 115 53.0
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 6.2e-24 114.4 113 53.1
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 6.2e-24 114.4 115 69.6
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 8.1e-24 114.0 113 69.9
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 8.1e-24 114.0 113 69.9
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.1e-23 113.6 119 68.9
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.1e-23 113.6 115 67.8
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.4e-23 113.2 113 62.8
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.4e-23 113.2 115 67.0
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 1.8e-23 112.8 116 50.0
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 2.4e-23 112.5 116 69.8
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 2.4e-23 112.5 112 54.5
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 3.1e-23 112.1 115 67.0
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 4.0e-23 111.7 113 67.3
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 5.3e-23 111.3 115 66.1
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 5.3e-23 111.3 115 69.6
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 9.0e-23 110.5 115 68.7
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 9.0e-23 110.5 115 59.1
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 9.0e-23 110.5 115 63.5
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 9.0e-23 110.5 113 68.1
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.2e-22 110.2 112 67.9
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.2e-22 110.2 115 63.5
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.5e-22 109.8 115 67.0
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 2.6e-22 109.0 116 67.2
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 3.4e-22 108.6 121 64.5
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 3.4e-22 108.6 113 70.8
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 7.6e-22 107.5 115 65.2
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.6e-22 107.5 109 67.0
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 9.9e-22 107.1 115 60.0
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 9.9e-22 107.1 113 68.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.9e-21 105.5 109 64.2
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 3.8e-21 105.1 110 66.4
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.9e-20 102.8 111 50.5
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 5.4e-20 101.3 111 52.3
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.6e-19 98.2 112 50.0
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 4.6e-19 98.2 113 47.8
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 7.9e-19 97.4 106 71.7
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 7.9e-19 97.4 88 62.5
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.1e-17 93.6 115 61.7
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.5e-17 92.4 92 65.2
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 3.3e-17 92.0 82 58.5
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 5.6e-17 91.3 115 43.5
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 3.6e-16 88.6 83 66.3
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 4.8e-16 88.2 113 61.1
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.1e-15 87.0 90 68.9
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 1.4e-15 86.7 90 75.6
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.4e-15 86.7 111 59.5
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.4e-15 86.7 94 47.9
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.1e-15 85.5 84 63.1
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.1e-15 85.5 84 51.2
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 9.0e-15 84.0 87 51.7
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.5e-14 83.2 88 50.0
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.5e-14 83.2 88 47.7
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 9.9e-14 80.5 54 74.1
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 1.3e-13 80.1 209 37.8
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.7e-13 79.7 84 47.6
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 1.7e-13 79.7 82 70.7
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 1.7e-13 79.7 113 44.2
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 2.2e-13 79.3 90 65.6
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 3.8e-13 78.6 89 68.5
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 3.8e-13 78.6 110 57.3
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 3.8e-13 78.6 50 72.0
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.4e-13 77.8 120 42.5
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 8.4e-13 77.4 106 40.6
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.9e-12 76.3 52 69.2
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 4.2e-12 75.1 50 68.0
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.2e-12 75.1 97 50.5
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 9.3e-12 73.9 93 62.4
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.6e-11 73.2 73 52.1
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 1.0e-10 70.5 90 41.1
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.3e-10 69.3 88 43.2
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.1e-09 67.0 86 61.6
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 3.3e-09 65.5 90 58.9
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 6.9e-07 57.8 61 45.9


User provided reference genes

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