Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G40980 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.1e-41 172.9 88 100.0
AL54U10010 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.1e-41 172.9 88 100.0
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.6e-18 95.9 58 87.9
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.6e-18 95.9 58 87.9
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.8e-18 95.1 58 86.2
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 4.8e-18 94.4 58 86.2
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.1e-17 93.2 58 84.5
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 2.4e-17 92.0 52 88.5
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 9.0e-17 90.1 52 88.5
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.5e-14 82.0 61 73.8
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 5.5e-14 80.9 57 71.9
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 5.5e-14 80.9 57 71.9
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 9.4e-14 80.1 58 72.4
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 9.4e-14 80.1 58 72.4
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 9.4e-14 80.1 58 72.4
BraA03t10446Z Brassica rapa HOM05D004593 ORTHO05D003703 4.6e-13 77.8 52 73.1
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 6.1e-13 77.4 57 73.7
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 6.1e-13 77.4 57 70.2
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 6.1e-13 77.4 57 70.2
C03p13070 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-12 76.6 57 64.9
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.4e-12 76.3 58 72.4
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 1.4e-12 76.3 57 70.2
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.8e-12 75.9 58 74.1
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 5.1e-12 74.3 52 71.2
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 5.1e-12 74.3 52 71.2
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 6.7e-12 73.9 57 70.2
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 6.7e-12 73.9 57 70.2
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 6.7e-12 73.9 57 70.2
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 8.8e-12 73.6 52 71.2
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-11 73.2 52 71.2
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 1.1e-11 73.2 52 71.2
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 2.0e-11 72.4 57 70.2
CARHR183820 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.5e-11 72.0 52 71.2
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.5e-11 72.0 52 69.2
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 3.3e-11 71.6 52 67.3
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 4.3e-11 71.2 57 68.4
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 4.3e-11 71.2 58 70.7
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 4.3e-11 71.2 58 70.7
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 5.7e-11 70.9 58 69.0
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 5.7e-11 70.9 57 68.4
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 7.4e-11 70.5 52 69.2
BcaB08g36237 Brassica carinata HOM05D004593 ORTHO05D003703 2.8e-10 68.6 84 47.6
Sp6g21310 Schrenkiella parvula HOM05D004593 ORTHO05D003703 3.7e-10 68.2 70 54.3
BcaB05g22576 Brassica carinata HOM05D004593 ORTHO05D003703 6.3e-10 67.4 59 59.3
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 6.3e-10 67.4 52 67.3
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-09 66.6 51 66.7
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 1.1e-09 66.6 51 66.7
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 1.8e-09 65.9 51 64.7
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 1.8e-09 65.9 58 63.8
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.4e-09 65.5 58 65.5
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.4e-09 65.5 58 62.1
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.4e-09 65.5 58 62.1
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 3.1e-09 65.1 58 63.8
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 3.1e-09 65.1 51 64.7
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 3.1e-09 65.1 58 63.8
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 3.1e-09 65.1 51 64.7
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 3.1e-09 65.1 58 63.8
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 4.1e-09 64.7 51 64.7
A10p16840 Brassica napus HOM05D004593 ORTHO05D003703 4.1e-09 64.7 79 53.2
A10p16860 Brassica napus HOM05D004593 ORTHO05D003703 4.1e-09 64.7 79 53.2
BraA10t43762Z Brassica rapa HOM05D004593 ORTHO05D003703 4.1e-09 64.7 79 53.2
BcaB08g36241 Brassica carinata HOM05D004593 ORTHO05D003703 9.1e-09 63.5 70 52.9
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-08 63.2 58 62.1
A10p16850 Brassica napus HOM05D004593 ORTHO05D003703 2.6e-08 62.0 53 62.3
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 3.4e-08 61.6 52 63.5
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 3.4e-08 61.6 52 61.5
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 3.4e-08 61.6 52 63.5
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 3.4e-08 61.6 52 63.5
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 3.4e-08 61.6 52 61.5
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 4.5e-08 61.2 52 57.7
Carub.0008s1994 Capsella rubella HOM05D004593 ORTHO05D003703 4.5e-08 61.2 52 51.9
C03p15920 Brassica napus HOM05D004593 ORTHO05D003703 5.9e-08 60.8 37 75.7
BolC3t14022H Brassica oleracea HOM05D004593 ORTHO05D003703 5.9e-08 60.8 37 75.7
BraA10t43765Z Brassica rapa HOM05D004593 ORTHO05D003703 7.7e-08 60.5 79 49.4
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.0e-07 60.1 52 57.7
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-07 60.1 58 63.8
BcaC01g06509 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-07 59.3 51 56.9
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-07 59.3 51 56.9
BcaC04g19750 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-07 59.3 59 61.0
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-07 59.3 51 56.9
C09p52010 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-07 59.3 59 61.0
BolC9t58063H Brassica oleracea HOM05D004593 ORTHO05D003703 1.7e-07 59.3 59 61.0
BcaB08g36234 Brassica carinata HOM05D004593 ORTHO05D003703 2.2e-07 58.9 71 50.7
BraA10t43763Z Brassica rapa HOM05D004593 ORTHO05D003703 2.9e-07 58.5 53 58.5
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 5.0e-07 57.8 52 53.8
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-06 56.6 49 59.2
BcaB08g36243 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-06 56.6 69 47.8
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 4.2e-06 54.7 50 56.0
Aa31LG1G11610 Aethionema arabicum HOM05D004593 ORTHO05D003703 5.5e-06 54.3 52 50.0
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 5.5e-06 54.3 50 52.0
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 9.4e-06 53.5 35 68.6
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 9.4e-06 53.5 45 55.6
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 9.4e-06 53.5 50 52.0


User provided reference genes

Program Settings