Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G22610 Arabidopsis lyrata HOM05D001341 ORTHO05D001181 1.2e-13 79.7 88 100.0
AT2G27710 Arabidopsis thaliana HOM05D001341 ORTHO05D001181 4.5e-08 61.2 68 60.3
AL4G22580 Arabidopsis lyrata HOM05D001341 ORTHO05D001181 5.9e-08 60.8 68 60.3
Carub.0004s0846 Capsella rubella HOM05D001341 ORTHO05D001181 5.9e-08 60.8 68 60.3
BcaB02g10728 Brassica carinata HOM05D001341 ORTHO05D001181 7.7e-08 60.5 114 73.7
Thhalv10023766m.g Eutrema salsugineum HOM05D001341 ORTHO05D001181 1.0e-07 60.1 68 60.3
BcaC02g08236 Brassica carinata HOM05D001341 ORTHO05D001181 1.3e-07 59.7 114 74.6
CARHR120390 Cardamine hirsuta HOM05D001341 ORTHO05D001181 1.3e-07 59.7 68 58.8
AL4G22590 Arabidopsis lyrata HOM05D001341 ORTHO05D001181 1.7e-07 59.3 68 58.8
BcaB01g03082 Brassica carinata HOM05D001341 ORTHO05D001181 1.7e-07 59.3 39 84.6
BcaB01g03083 Brassica carinata HOM05D001341 ORTHO05D001181 1.7e-07 59.3 39 84.6
BcaC01g04954 Brassica carinata HOM05D001341 ORTHO05D001181 1.7e-07 59.3 39 84.6
A03p26480 Brassica napus HOM05D001341 ORTHO05D001181 1.7e-07 59.3 39 84.6
C03p31760 Brassica napus HOM05D001341 ORTHO05D001181 1.7e-07 59.3 39 84.6
BcaB02g10109 Brassica carinata HOM05D001341 ORTHO05D001181 2.2e-07 58.9 114 71.1
A07p18340 Brassica napus HOM05D001341 ORTHO05D001181 2.2e-07 58.9 114 73.7
Thhalv10017442m.g Eutrema salsugineum HOM05D001341 ORTHO05D001181 2.9e-07 58.5 68 58.8
A04p21080 Brassica napus HOM05D001341 ORTHO05D001181 5.0e-07 57.8 114 73.7
C04p56890 Brassica napus HOM05D001341 ORTHO05D001181 5.0e-07 57.8 114 73.7
AT2G27720 Arabidopsis thaliana HOM05D001341 ORTHO05D001181 6.5e-07 57.4 68 57.4
Carub.0004s0848 Capsella rubella HOM05D001341 ORTHO05D001181 8.5e-07 57.0 68 57.4
Sp4g10510 Schrenkiella parvula HOM05D001341 ORTHO05D001181 1.4e-06 56.2 68 55.9
THA.LOC104800542 Tarenaya hassleriana HOM05D001341 ORTHO05D001181 1.4e-06 56.2 114 71.1
Aa31LG5G8270 Aethionema arabicum HOM05D001341 ORTHO05D001181 1.9e-06 55.8 33 93.9
BcaB06g28163 Brassica carinata HOM05D001341 ORTHO05D001181 1.9e-06 55.8 68 57.4
BcaC02g10900 Brassica carinata HOM05D001341 ORTHO05D001181 1.9e-06 55.8 68 54.4
C04p23940 Brassica napus HOM05D001341 ORTHO05D001181 1.9e-06 55.8 68 55.9
THA.LOC104799732 Tarenaya hassleriana HOM05D001341 ORTHO05D001181 2.5e-06 55.5 68 54.4
THA.LOC104815729 Tarenaya hassleriana HOM05D001341 ORTHO05D001181 2.5e-06 55.5 114 71.1
Sp4g10490 Schrenkiella parvula HOM05D001341 ORTHO05D001181 3.2e-06 55.1 68 54.4
Prupe.6G123800 Prunus persica HOM05D001341 ORTHO05D001181 5.5e-06 54.3 114 55.3
BcaC02g10897 Brassica carinata HOM05D001341 ORTHO05D001181 7.2e-06 53.9 68 54.4
FvH4_6g18210 Fragaria vesca HOM05D001341 ORTHO05D001181 9.4e-06 53.5 68 51.5
FAN02G1186 Fragaria x ananassa HOM05D001341 ORTHO05D001181 9.4e-06 53.5 68 51.5
FAN09G3602 Fragaria x ananassa HOM05D001341 ORTHO05D001181 9.4e-06 53.5 68 51.5
FAN14G3598 Fragaria x ananassa HOM05D001341 ORTHO05D001181 9.4e-06 53.5 68 51.5


User provided reference genes

Program Settings