Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G33140 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 9.5e-80 300.1 146 100.0
Thhalv10022102m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 4.2e-35 151.8 154 58.4
BcaB06g26038 Brassica carinata HOM05D000203 ORTHO05D000135 1.5e-32 143.3 150 56.7
Sp3g17710 Schrenkiella parvula HOM05D000203 ORTHO05D000135 1.5e-32 143.3 151 58.9
A05p29880 Brassica napus HOM05D000203 ORTHO05D000135 2.6e-29 132.5 152 54.6
BolC5t33235H Brassica oleracea HOM05D000203 ORTHO05D000135 1.3e-28 130.2 152 53.9
C05p45090 Brassica napus HOM05D000203 ORTHO05D000135 1.7e-28 129.8 152 53.3
C02p45880 Brassica napus HOM05D000203 ORTHO05D000135 3.8e-28 128.6 152 52.6
AL8G37040 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 8.5e-28 127.5 160 49.4
BcaC05g28428 Brassica carinata HOM05D000203 ORTHO05D000135 1.9e-27 126.3 152 52.0
A05p30070 Brassica napus HOM05D000203 ORTHO05D000135 1.0e-25 120.6 152 50.7
BraA05t21847Z Brassica rapa HOM05D000203 ORTHO05D000135 1.0e-25 120.6 152 50.7
A01p35040 Brassica napus HOM05D000203 ORTHO05D000135 3.0e-25 119.0 149 49.7
BraA01t03585Z Brassica rapa HOM05D000203 ORTHO05D000135 6.7e-25 117.9 149 49.0
BcaC09g48928 Brassica carinata HOM05D000203 ORTHO05D000135 2.0e-24 116.3 139 50.4
C01p44450 Brassica napus HOM05D000203 ORTHO05D000135 2.0e-24 116.3 139 50.4
BolC1t04410H Brassica oleracea HOM05D000203 ORTHO05D000135 2.0e-24 116.3 139 50.4
CARHR095150 Cardamine hirsuta HOM05D000203 ORTHO05D000135 7.4e-24 114.4 112 59.8
Sp6g22010 Schrenkiella parvula HOM05D000203 ORTHO05D000135 2.0e-21 106.3 135 45.9
AT5G60440 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 2.6e-21 105.9 157 43.3
Carub.0008s2113 Capsella rubella HOM05D000203 ORTHO05D000135 4.5e-21 105.1 138 42.8
BcaB04g20684 Brassica carinata HOM05D000203 ORTHO05D000135 3.8e-20 102.1 134 50.7
Thhalv10015908m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 1.2e-18 97.1 152 41.4
Thhalv10012100m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.7e-18 95.9 152 40.1
Thhalv10003426m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 6.1e-18 94.7 186 33.9
Thhalv10000432m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 8.0e-18 94.4 114 46.5
Aa31LG8G6470 Aethionema arabicum HOM05D000203 ORTHO05D000135 8.8e-17 90.9 175 40.0
C02p11680 Brassica napus HOM05D000203 ORTHO05D000135 2.6e-16 89.4 138 39.9
BraA02t05726Z Brassica rapa HOM05D000203 ORTHO05D000135 2.6e-16 89.4 138 39.9
BolC2t07264H Brassica oleracea HOM05D000203 ORTHO05D000135 2.2e-15 86.3 138 38.4
Sp6g22020 Schrenkiella parvula HOM05D000203 ORTHO05D000135 2.2e-15 86.3 102 44.1
BcaC03g13972 Brassica carinata HOM05D000203 ORTHO05D000135 6.3e-15 84.7 138 38.4
BcaB08g36341 Brassica carinata HOM05D000203 ORTHO05D000135 8.2e-15 84.3 150 40.0
A10p17650 Brassica napus HOM05D000203 ORTHO05D000135 1.8e-14 83.2 139 41.7
BolC9t58183H Brassica oleracea HOM05D000203 ORTHO05D000135 3.1e-14 82.4 139 41.7
BcaC04g19703 Brassica carinata HOM05D000203 ORTHO05D000135 5.3e-14 81.6 139 41.7
C09p53080 Brassica napus HOM05D000203 ORTHO05D000135 5.3e-14 81.6 139 41.7
BcaB05g22648 Brassica carinata HOM05D000203 ORTHO05D000135 1.9e-11 73.2 108 41.7
Aa31LG1G12470 Aethionema arabicum HOM05D000203 ORTHO05D000135 3.2e-11 72.4 158 36.7
BcaB05g22642 Brassica carinata HOM05D000203 ORTHO05D000135 4.0e-09 65.5 121 36.4
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 6.7e-09 64.7 139 34.5
BraA02t05725Z Brassica rapa HOM05D000203 ORTHO05D000135 3.3e-08 62.4 114 38.6
BolC2t07260H Brassica oleracea HOM05D000203 ORTHO05D000135 5.7e-08 61.6 112 36.6
BraA02t05723Z Brassica rapa HOM05D000203 ORTHO05D000135 1.7e-07 60.1 102 40.2
BraA07t29617Z Brassica rapa HOM05D000203 ORTHO05D000135 8.2e-07 57.8 102 39.2
AT4G36590 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 1.1e-06 57.4 105 35.2
BcaB06g28235 Brassica carinata HOM05D000203 ORTHO05D000135 1.4e-06 57.0 137 30.7
Thhalv10027307m.g Eutrema salsugineum HOM05D000203 ORTHO05D023666 1.4e-06 57.0 105 37.1
THA.LOC104827420 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 3.1e-06 55.8 116 36.2
A07p19100 Brassica napus HOM05D000203 ORTHO05D000135 4.1e-06 55.5 102 38.2
Thhalv10028255m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 4.1e-06 55.5 124 38.7
BcaB02g10179 Brassica carinata HOM05D000203 ORTHO05D000135 5.3e-06 55.1 103 37.9
Sp4g11470 Schrenkiella parvula HOM05D000203 ORTHO05D000135 7.0e-06 54.7 110 36.4
BolC2t07262H Brassica oleracea HOM05D000203 ORTHO05D039916 9.1e-06 54.3 112 34.8


User provided reference genes

Program Settings