Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G29450 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 1.7e-60 235.7 114 100.0
Aa31LG8G9090 Aethionema arabicum HOM05D000956 ORTHO05D003111 9.0e-17 90.5 105 44.8
BcaC09g48640 Brassica carinata HOM05D000956 ORTHO05D003111 9.0e-17 90.5 104 46.2
AT2G33070 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 1.5e-16 89.7 106 44.3
AL348U10010 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 1.3e-15 86.7 106 43.4
AL4G28620 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 1.3e-15 86.7 106 43.4
Aa31LG8G3530 Aethionema arabicum HOM05D000956 ORTHO05D003111 1.7e-15 86.3 109 44.0
Carub.0003s1614 Capsella rubella HOM05D000956 ORTHO05D003111 1.7e-15 86.3 106 45.3
AL3G29210 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 2.9e-15 85.5 105 42.9
AT3G16390 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 3.8e-15 85.1 105 43.8
Carub.0003s1615 Capsella rubella HOM05D000956 ORTHO05D003111 3.8e-15 85.1 106 43.4
C05p50060 Brassica napus HOM05D000956 ORTHO05D003111 6.4e-15 84.3 106 43.4
Sp3g19080 Schrenkiella parvula HOM05D000956 ORTHO05D003111 6.4e-15 84.3 105 43.8
BcaB01g04343 Brassica carinata HOM05D000956 ORTHO05D003111 8.4e-15 84.0 106 42.5
BraA05t22131Z Brassica rapa HOM05D000956 ORTHO05D003111 1.4e-14 83.2 112 41.1
AT3G16400 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 3.2e-14 82.0 106 43.4
A05p33070 Brassica napus HOM05D000956 ORTHO05D003111 3.2e-14 82.0 112 40.2
CARHR126320 Cardamine hirsuta HOM05D000956 ORTHO05D003111 3.2e-14 82.0 105 37.1
Sp3g06650 Schrenkiella parvula HOM05D000956 ORTHO05D003111 3.2e-14 82.0 115 40.9
A05p33120 Brassica napus HOM05D000956 ORTHO05D003111 9.3e-14 80.5 104 42.3
BraA05t22134Z Brassica rapa HOM05D000956 ORTHO05D003111 9.3e-14 80.5 104 42.3
Thhalv10016872m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 9.3e-14 80.5 105 40.0
BcaC09g48605 Brassica carinata HOM05D000956 ORTHO05D003111 1.6e-13 79.7 100 43.0
A01p37830 Brassica napus HOM05D000956 ORTHO05D003111 1.6e-13 79.7 100 43.0
C01p47910 Brassica napus HOM05D000956 ORTHO05D003111 1.6e-13 79.7 100 43.0
BolC1t04757H Brassica oleracea HOM05D000956 ORTHO05D003111 1.6e-13 79.7 100 43.0
BraA01t03844Z Brassica rapa HOM05D000956 ORTHO05D003111 1.6e-13 79.7 100 43.0
Carub.0003s1616 Capsella rubella HOM05D000956 ORTHO05D003111 1.6e-13 79.7 106 41.5
Sp3g14770 Schrenkiella parvula HOM05D000956 ORTHO05D003111 1.6e-13 79.7 106 43.4
AT3G16410 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 2.1e-13 79.3 106 42.5
Aa31LG8G3560 Aethionema arabicum HOM05D000956 ORTHO05D003111 2.7e-13 79.0 83 51.8
Thhalv10021130m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 2.7e-13 79.0 111 39.6
Thhalv10020667m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 3.5e-13 78.6 105 41.0
AL3G29175 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 4.6e-13 78.2 106 41.5
Aa31LG8G3550 Aethionema arabicum HOM05D000956 ORTHO05D003111 6.0e-13 77.8 109 38.5
AL1G60110 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 7.9e-13 77.4 105 40.0
CARHR091610 Cardamine hirsuta HOM05D000956 ORTHO05D003111 7.9e-13 77.4 106 40.6
CARHR082430 Cardamine hirsuta HOM05D000956 ORTHO05D003111 1.0e-12 77.0 111 40.5
A05p40500 Brassica napus HOM05D000956 ORTHO05D003111 3.0e-12 75.5 113 40.7
BolC5t34615H Brassica oleracea HOM05D000956 ORTHO05D003111 3.0e-12 75.5 113 38.9
BcaB06g28597 Brassica carinata HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
BcaC02g07917 Brassica carinata HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
A04p24960 Brassica napus HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
C04p61990 Brassica napus HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
BolC4t27675H Brassica oleracea HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
BraA04t18008Z Brassica rapa HOM05D000956 ORTHO05D003111 3.9e-12 75.1 105 34.3
THA.LOC104817954 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 3.9e-12 75.1 113 37.2
Medtr2g069030 Medicago truncatula HOM05D000956 ORTHO05D003111 5.1e-12 74.7 108 39.8
TPR.G31389 Trifolium pratense HOM05D000956 ORTHO05D003111 5.1e-12 74.7 108 39.8
C05p59600 Brassica napus HOM05D000956 ORTHO05D003111 6.7e-12 74.3 113 38.1
BolC5t33742H Brassica oleracea HOM05D000956 ORTHO05D003111 8.7e-12 73.9 135 33.3
Carub.0001s4095 Capsella rubella HOM05D000956 ORTHO05D003111 8.7e-12 73.9 103 39.8
Ca_27548_v3 Cicer arietinum L. HOM05D000956 ORTHO05D003111 8.7e-12 73.9 108 38.0
Dinv21303 Davidia involucrata HOM05D000956 ORTHO05D003111 2.5e-11 72.4 111 38.7
arahy.Tifrunner.gnm1.ann1.CFJ0KE Arachis hypogaea HOM05D000956 ORTHO05D003111 3.3e-11 72.0 111 33.3
C06p07330 Brassica napus HOM05D000956 ORTHO05D003111 3.3e-11 72.0 98 41.8
BolC6t35825H Brassica oleracea HOM05D000956 ORTHO05D003111 3.3e-11 72.0 98 41.8
Carub.0003s0730 Capsella rubella HOM05D000956 ORTHO05D003111 3.3e-11 72.0 113 38.9
Phvul.005G058900 Phaseolus vulgaris HOM05D000956 ORTHO05D003111 3.3e-11 72.0 108 38.0
Cfa014222 Carpinus fangiana HOM05D000956 ORTHO05D003111 4.3e-11 71.6 110 39.1
Glyma.08G169800 Glycine max HOM05D000956 ORTHO05D003111 5.6e-11 71.2 108 38.0
Psat1g012640 Pisum sativum HOM05D000956 ORTHO05D003111 5.6e-11 71.2 108 37.0
Aa31LG5G18300 Aethionema arabicum HOM05D000956 ORTHO05D003111 7.4e-11 70.9 110 35.5
arahy.Tifrunner.gnm1.ann1.K9835S Arachis hypogaea HOM05D000956 ORTHO05D003111 7.4e-11 70.9 111 33.3
BcaB06g25744 Brassica carinata HOM05D000956 ORTHO05D003111 9.6e-11 70.5 135 32.6
Sp1g40480 Schrenkiella parvula HOM05D000956 ORTHO05D003111 1.6e-10 69.7 105 40.0
Hund01551 Selenicereus undatus HOM05D000956 ORTHO05D003111 2.1e-10 69.3 111 39.6
CiPaw.03G282100 Carya illinoinensis HOM05D000956 ORTHO05D003111 2.8e-10 68.9 110 39.1
BcaB06g25743 Brassica carinata HOM05D000956 ORTHO05D003111 3.6e-10 68.6 148 29.7
ECA240G0148 Erigeron canadensis HOM05D000956 ORTHO05D003111 3.6e-10 68.6 111 36.9
FAN05G3240 Fragaria x ananassa HOM05D000956 ORTHO05D003111 3.6e-10 68.6 110 36.4
FAN09G2446 Fragaria x ananassa HOM05D000956 ORTHO05D003111 3.6e-10 68.6 110 36.4
Aqoxy4G02286 Aquilegia oxysepala HOM05D000956 ORTHO05D003111 4.8e-10 68.2 110 38.2
VMungo1080G1252 Vigna mungo HOM05D000956 ORTHO05D003111 4.8e-10 68.2 108 37.0
A05p33080 Brassica napus HOM05D000956 ORTHO05D003111 8.1e-10 67.4 150 29.3
BolC5t33753H Brassica oleracea HOM05D000956 ORTHO05D003111 8.1e-10 67.4 150 31.3
BolC5t33756H Brassica oleracea HOM05D000956 ORTHO05D003111 8.1e-10 67.4 150 31.3
AUR62015000 Chenopodium quinoa HOM05D000956 ORTHO05D003111 8.1e-10 67.4 110 36.4
Gohir.D08G160300 Gossypium hirsutum HOM05D000956 ORTHO05D003111 8.1e-10 67.4 107 38.3
Ah.01g013910 Amaranthus hybridus HOM05D000956 ORTHO05D003111 1.1e-09 67.0 110 38.2
BcaB07g33432 Brassica carinata HOM05D000956 ORTHO05D003111 1.1e-09 67.0 95 43.2
BolC5t33748H Brassica oleracea HOM05D000956 ORTHO05D003111 1.1e-09 67.0 150 29.3
Lj8P136T73 Lonicera japonica HOM05D000956 ORTHO05D003111 1.1e-09 67.0 111 36.0
Zm00001eb303740 Zea mays HOM05D000956 ORTHO05D003111 1.1e-09 67.0 110 33.6
BcaB06g25742 Brassica carinata HOM05D000956 ORTHO05D003111 1.8e-09 66.2 149 32.2
BcaC05g28881 Brassica carinata HOM05D000956 ORTHO05D003111 1.8e-09 66.2 149 31.5
A05p33110 Brassica napus HOM05D000956 ORTHO05D003111 1.8e-09 66.2 150 31.3
C05p50030 Brassica napus HOM05D000956 ORTHO05D003111 1.8e-09 66.2 149 31.5
Cc00_g06790 Coffea canephora HOM05D000956 ORTHO05D003111 2.4e-09 65.9 107 38.3
HanXRQChr03g0075051 Helianthus annuus HOM05D000956 ORTHO05D003111 2.4e-09 65.9 111 34.2
MBI15_g31898_MAGBIO Magnolia biondii HOM05D000956 ORTHO05D003111 2.4e-09 65.9 110 36.4
ATR0691G145 Amborella trichopoda HOM05D000956 ORTHO05D003111 3.1e-09 65.5 111 38.7
BcaB02g09167 Brassica carinata HOM05D000956 ORTHO05D003111 3.1e-09 65.5 94 42.6
BcaC05g28878 Brassica carinata HOM05D000956 ORTHO05D003111 3.1e-09 65.5 149 28.9
C05p50010 Brassica napus HOM05D000956 ORTHO05D003111 3.1e-09 65.5 149 28.9
FvH4_6g40583 Fragaria vesca HOM05D000956 ORTHO05D003111 3.1e-09 65.5 110 35.5
FAN14G4528 Fragaria x ananassa HOM05D000956 ORTHO05D003111 3.1e-09 65.5 110 35.5
MD17G1117500 Malus domestica HOM05D000956 ORTHO05D003111 3.1e-09 65.5 116 36.2
BcaB02g10856 Brassica carinata HOM05D000956 ORTHO05D003111 4.0e-09 65.1 148 28.4
BraA06t23299Z Brassica rapa HOM05D000956 ORTHO05D003111 4.0e-09 65.1 109 37.6
PGR044G2578 Punica granatum HOM05D000956 ORTHO05D003111 4.0e-09 65.1 113 37.2
vmacro12079 Vaccinium macrocarpon HOM05D000956 ORTHO05D003111 4.0e-09 65.1 112 35.7
BcaB07g33298 Brassica carinata HOM05D000956 ORTHO05D003111 5.3e-09 64.7 94 41.5
A06p02060 Brassica napus HOM05D000956 ORTHO05D003111 5.3e-09 64.7 86 40.7
CARHR042180 Cardamine hirsuta HOM05D000956 ORTHO05D003111 5.3e-09 64.7 99 37.4
Gorai.004G166500 Gossypium raimondii HOM05D000956 ORTHO05D003111 5.3e-09 64.7 107 37.4
Ciclev10015897m.g Citrus clementina HOM05D000956 ORTHO05D003111 6.9e-09 64.3 111 36.0
BraA06t23421Z Brassica rapa HOM05D000956 ORTHO05D003111 9.0e-09 63.9 86 40.7
BcaC06g34550 Brassica carinata HOM05D000956 ORTHO05D003111 1.5e-08 63.2 105 35.2
C07p27260 Brassica napus HOM05D000956 ORTHO05D003111 1.5e-08 63.2 105 35.2
BolC7t43256H Brassica oleracea HOM05D000956 ORTHO05D003111 1.5e-08 63.2 105 35.2
AL8G20880 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 2.0e-08 62.8 103 34.0
AT1G54040 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 2.0e-08 62.8 105 36.2
BcaB07g33430 Brassica carinata HOM05D000956 ORTHO05D003111 2.6e-08 62.4 94 40.4
THA.LOC104802626 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 2.6e-08 62.4 110 33.6
AL1G62740 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 3.4e-08 62.0 106 37.7
Lalb_Chr10g0098111 Lupinus albus HOM05D000956 ORTHO05D003111 3.4e-08 62.0 107 35.5
Prupe.3G197100 Prunus persica HOM05D000956 ORTHO05D003111 3.4e-08 62.0 116 35.3
AT5G48180 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 4.5e-08 61.6 103 35.0
A06p47170 Brassica napus HOM05D000956 ORTHO05D003111 5.8e-08 61.2 105 35.2
BraA06t27588Z Brassica rapa HOM05D000956 ORTHO05D003111 5.8e-08 61.2 105 35.2
Lsat_1_v5_gn_9_103620 Lactuca sativa HOM05D000956 ORTHO05D003111 7.6e-08 60.8 115 33.0
BcaC08g43585 Brassica carinata HOM05D000956 ORTHO05D003111 9.9e-08 60.5 94 41.5
C06p09830 Brassica napus HOM05D000956 ORTHO05D003111 9.9e-08 60.5 94 41.5
BolC6t36054H Brassica oleracea HOM05D000956 ORTHO05D003111 9.9e-08 60.5 94 41.5
Carub.0008s0777 Capsella rubella HOM05D000956 ORTHO05D003111 9.9e-08 60.5 103 35.0
FAN02G3046 Fragaria x ananassa HOM05D000956 ORTHO05D003111 9.9e-08 60.5 96 35.4
Haze_12625 Corylus avellana HOM05D000918 ORTHO05D000791 1.3e-07 60.1 90 38.9
SGA_v2.0_scaffold181G39691 Striga asiatica HOM05D000956 ORTHO05D003111 8.4e-07 57.4 100 35.0
C05p49930 Brassica napus HOM05D000956 ORTHO05D003111 1.1e-06 57.0 66 42.4
BcaC01g01301 Brassica carinata HOM05D000956 ORTHO05D003111 1.4e-06 56.6 86 36.0
C03p90390 Brassica napus HOM05D000956 ORTHO05D003111 1.4e-06 56.6 86 36.0
BolC3t21362H Brassica oleracea HOM05D000956 ORTHO05D003111 1.4e-06 56.6 86 36.0
THA.LOC104822434 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 1.4e-06 56.6 108 32.4
A08p02400 Brassica napus HOM05D000956 ORTHO05D003111 3.2e-06 55.5 86 34.9
BraA08t32281Z Brassica rapa HOM05D000956 ORTHO05D003111 3.2e-06 55.5 86 34.9
A08p02420 Brassica napus HOM05D000956 ORTHO05D003111 4.2e-06 55.1 86 34.9
BcaC08g43365 Brassica carinata HOM05D000956 ORTHO05D003111 5.5e-06 54.7 102 35.3
THA.LOC104803091 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 5.5e-06 54.7 92 38.0
BcaC01g01302 Brassica carinata HOM05D000956 ORTHO05D003111 9.3e-06 53.9 86 33.7
C03p90400 Brassica napus HOM05D000956 ORTHO05D003111 9.3e-06 53.9 86 33.7
BolC3t21363H Brassica oleracea HOM05D000956 ORTHO05D003111 9.3e-06 53.9 86 33.7


User provided reference genes

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