Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 0.0e+00 1415.6 721 100.0
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 5.8e-279 964.1 716 71.9
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.9e-274 949.1 716 71.5
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.1e-272 943.3 560 88.0
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 6.2e-257 891.0 734 66.6
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 2.0e-255 885.9 784 63.0
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 3.9e-251 871.7 707 68.3
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 1.0e-235 820.5 717 64.0
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 1.7e-233 813.1 724 63.4
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 1.2e-231 807.0 725 63.2
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 1.2e-231 807.0 725 63.2
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 4.5e-231 805.1 725 63.3
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 5.9e-223 778.1 729 59.1
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 4.5e-215 751.9 609 67.2
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.3e-201 707.2 708 58.9
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.7e-199 699.5 710 59.0
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.5e-186 657.1 725 49.9
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 4.9e-185 652.1 723 50.5
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 8.3e-185 651.4 731 48.8
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 1.2e-180 637.5 739 49.1
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.5e-178 630.6 727 47.7
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 1.5e-178 630.6 727 47.7
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 4.9e-177 625.5 732 48.5
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.6e-175 620.5 729 47.7
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 6.0e-175 618.6 726 48.8
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 7.1e-168 595.1 721 47.4
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 7.1e-168 595.1 731 48.0
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 2.3e-166 590.1 732 47.3
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 6.6e-166 588.6 729 47.3
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 3.3e-165 586.3 731 47.2
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 7.3e-165 585.1 732 47.3
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 9.6e-165 584.7 732 46.4
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 8.1e-164 581.6 729 47.1
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 2.4e-163 580.1 734 46.5
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.5e-162 577.4 730 46.7
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 8.4e-161 571.6 733 46.4
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 1.4e-160 570.9 389 77.4
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 7.9e-159 565.1 727 45.3
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 1.5e-157 560.8 727 45.4
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 2.4e-155 553.5 730 44.9
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.4e-155 553.5 748 44.9
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 7.6e-154 548.5 733 45.7
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 3.8e-153 546.2 742 44.2
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 4.2e-152 542.7 735 43.9
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 3.5e-151 539.7 732 44.4
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.3e-150 537.7 727 43.2
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.3e-148 531.2 724 43.5
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 2.1e-148 530.4 738 43.6
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 1.8e-147 527.3 727 42.9
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 2.4e-147 526.9 728 43.7
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 7.6e-146 521.9 729 43.1
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 1.3e-145 521.2 728 43.3
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 3.8e-145 519.6 744 42.7
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 8.4e-145 518.5 730 43.7
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 4.2e-144 516.2 725 41.8
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 5.5e-144 515.8 725 42.8
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.1e-143 513.8 683 45.7
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 7.9e-143 511.9 726 44.2
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 1.0e-142 511.5 742 42.3
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.3e-142 511.1 736 42.5
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 3.0e-142 510.0 734 42.2
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 3.9e-142 509.6 730 44.4
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 5.1e-142 509.2 740 40.9
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 1.1e-141 508.1 675 45.8
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 1.5e-141 507.7 727 43.1
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 2.5e-141 506.9 728 42.4
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 2.1e-140 503.8 728 42.4
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 3.1e-139 500.0 727 43.6
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 4.1e-139 499.6 668 43.0
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 3.4e-138 496.5 746 40.9
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 1.9e-136 490.7 731 41.5
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 5.5e-136 489.2 458 62.0
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 9.3e-136 488.4 734 40.9
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 6.1e-135 485.7 731 42.5
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 7.9e-135 485.3 731 41.6
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.8e-134 484.2 731 42.4
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 2.3e-134 483.8 740 40.8
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 6.7e-134 482.3 749 41.3
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 1.1e-133 481.5 734 41.7
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 2.5e-133 480.3 570 48.4
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 2.5e-133 480.3 792 38.6
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 4.3e-133 479.6 749 40.6
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.6e-132 477.6 735 40.0
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 1.1e-131 474.9 734 40.3
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 5.3e-131 472.6 734 39.8
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 5.3e-131 472.6 729 41.2
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 5.3e-131 472.6 754 38.7
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 6.9e-131 472.2 753 39.0
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 1.9e-128 464.2 724 40.1
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 3.2e-128 463.4 728 40.8
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 5.5e-128 462.6 395 63.8
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 1.1e-117 428.3 548 46.7
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 2.8e-116 423.7 577 43.0
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 6.3e-116 422.5 756 35.8
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 9.1e-115 418.7 818 34.8
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 5.9e-114 416.0 577 42.6
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 3.6e-111 406.8 690 37.7
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 4.8e-108 396.4 569 42.9
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 4.5e-106 389.8 753 35.9
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 3.6e-95 353.6 298 63.8
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 8.3e-84 315.8 520 39.2
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 3.6e-79 300.4 602 36.9
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.5e-77 295.0 490 40.0
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 2.4e-75 287.7 659 32.8
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 7.5e-69 266.2 806 29.3
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 1.7e-68 265.0 801 28.1
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 1.5e-64 251.9 750 29.9
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 5.8e-61 240.0 474 34.0
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 2.7e-58 231.1 264 52.3
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 1.7e-49 201.8 815 24.7
CARHR234630 Cardamine hirsuta HOM05D003876 ORTHO05D004560 2.1e-47 194.9 168 62.5
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 2.7e-34 151.4 177 51.4
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 1.8e-33 148.7 198 41.9
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.8e-31 141.4 136 52.2
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 1.1e-27 129.4 453 27.8
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 1.4e-27 129.0 210 35.7
Gohir.A05G328608 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.6e-26 125.6 144 49.3
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 5.3e-22 110.5 122 47.5
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 1.8e-14 85.5 133 33.8
Cre02.g074300 Chlamydomonas reinhardtii HOM05D003876 ORTHO05D004560 1.4e-09 69.3 185 29.2
SEGI_37008 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 2.0e-08 65.5 153 32.7
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-07 62.0 106 37.7


User provided reference genes

Program Settings