Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G10240 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 1.1e-190 669.8 344 100.0
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 2.2e-58 230.3 188 71.3
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 6.4e-58 228.8 188 70.2
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 2.0e-56 223.8 246 57.7
Carub.0008s0072 Capsella rubella HOM05D001734 ORTHO05D006943 1.7e-55 220.7 188 68.6
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 2.3e-55 220.3 188 68.1
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 1.1e-54 218.0 188 68.1
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 1.1e-54 218.0 188 68.1
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 5.6e-54 215.7 188 68.1
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 5.6e-54 215.7 188 68.1
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 5.6e-54 215.7 188 68.1
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 1.1e-52 211.5 188 66.5
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 2.4e-49 200.3 185 63.2
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 1.3e-34 151.4 188 45.2
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 1.7e-34 151.0 188 45.2
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 2.9e-34 150.2 188 45.2
Cpa.g.sc20.125 Carica papaya HOM05D001734 ORTHO05D006943 2.9e-34 150.2 188 44.7
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 3.8e-34 149.8 188 45.2
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 1.4e-33 147.9 188 43.1
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 4.2e-33 146.4 209 41.1
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 1.2e-32 144.8 188 44.7
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 3.5e-32 143.3 207 42.5
Thecc.02G053500 Theobroma cacao HOM05D001734 ORTHO05D006943 3.5e-32 143.3 186 45.7
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 4.6e-32 142.9 188 44.1
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 4.6e-32 142.9 207 42.5
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 4.6e-32 142.9 188 41.0
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 6.0e-32 142.5 186 44.1
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 6.0e-32 142.5 207 42.0
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 6.0e-32 142.5 188 45.2
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 7.8e-32 142.1 196 42.9
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 7.8e-32 142.1 196 42.9
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 1.0e-31 141.7 188 43.6
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 1.0e-31 141.7 188 43.6
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 1.0e-31 141.7 196 42.3
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 1.0e-31 141.7 188 44.1
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 1.3e-31 141.4 187 42.8
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 3.0e-31 140.2 188 44.7
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 3.9e-31 139.8 188 41.5
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 3.9e-31 139.8 195 41.0
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.5e-30 137.1 207 41.5
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 3.3e-30 136.7 191 41.9
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 3.3e-30 136.7 188 44.7
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 4.3e-30 136.3 185 42.7
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 5.6e-30 136.0 188 42.6
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 5.6e-30 136.0 188 40.4
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 5.6e-30 136.0 183 43.2
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 9.6e-30 135.2 188 42.0
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 2.1e-29 134.0 194 42.3
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 2.8e-29 133.7 194 41.8
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.8e-29 133.7 180 43.3
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 2.8e-29 133.7 191 41.4
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 3.6e-29 133.3 187 42.2
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 3.6e-29 133.3 184 40.2
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 4.8e-29 132.9 191 40.3
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 6.2e-29 132.5 188 40.4
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 6.2e-29 132.5 188 43.1
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 1.1e-28 131.7 191 40.3
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 2.4e-28 130.6 191 40.8
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 4.0e-28 129.8 188 40.4
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 4.0e-28 129.8 208 40.4
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 6.9e-28 129.0 188 42.0
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 1.2e-27 128.3 185 40.5
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 7.6e-27 125.6 185 41.6
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 1.3e-26 124.8 182 39.0
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 1.3e-26 124.8 186 40.3
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 4.9e-26 122.9 194 38.7
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 4.9e-26 122.9 186 37.6
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 6.4e-26 122.5 208 38.5
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 6.4e-26 122.5 186 42.5
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 1.4e-25 121.3 188 37.2
Phvul.007G017000 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 2.4e-25 120.6 186 40.3
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 5.4e-25 119.4 194 38.1
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 7.1e-25 119.0 188 39.4
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 7.1e-25 119.0 188 36.7
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 9.3e-25 118.6 185 39.5
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 1.2e-24 118.2 186 39.2
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 4.6e-24 116.3 186 36.6
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 4.6e-24 116.3 210 37.6
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 7.9e-24 115.5 188 35.1
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 1.3e-23 114.8 206 38.3
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 3.0e-23 113.6 186 39.8
MD10G1129700 Malus domestica HOM05D001734 ORTHO05D006943 8.7e-23 112.1 170 38.2
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 1.1e-22 111.7 208 36.1
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 1.9e-22 110.9 200 36.5
SEGI_35062 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 5.6e-22 109.4 188 38.8
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 5.6e-22 109.4 188 35.1
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 9.6e-22 108.6 202 37.6
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 2.1e-21 107.5 190 36.3
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 2.8e-21 107.1 191 35.6
ATR0661G423 Amborella trichopoda HOM05D001734 ORTHO05D006943 1.2e-19 101.7 208 34.1
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 6.4e-18 95.9 190 34.7
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 2.4e-17 94.0 177 39.5
vmacro02070 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 1.3e-15 88.2 103 48.5
AL8G45370 Arabidopsis lyrata HOM05D001743 ORTHO05D001685 2.5e-14 84.0 52 78.8
COL.COLO4_18014 Corchorus olitorius HOM05D001734 ORTHO05D006943 9.6e-14 82.0 60 66.7
AL3G39940 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 2.4e-12 77.4 52 75.0
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 2.0e-11 74.3 189 27.0
QL11p052526 Quercus lobata HOM05D001734 ORTHO05D006943 2.2e-10 70.9 103 36.9
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 8.4e-10 68.9 184 33.7
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 3.2e-09 67.0 57 50.9
AL7G44730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 4.2e-09 66.6 152 34.9
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis HOM05D001734 ORTHO05D006943 5.5e-09 66.2 206 27.2
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 1.2e-08 65.1 252 29.0


User provided reference genes

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