Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56010 Brassica napus HOM05D000203 ORTHO05D000135 1.4e-57 226.1 114 100.0
A09p56080 Brassica napus HOM05D000203 ORTHO05D000135 1.4e-57 226.1 114 100.0
BraA09t41003Z Brassica rapa HOM05D000203 ORTHO05D000135 1.4e-57 226.1 114 100.0
C08p39000 Brassica napus HOM05D000203 ORTHO05D000135 6.4e-55 217.2 114 94.7
BcaC07g40902 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-54 216.5 114 94.7
BolC8t51474H Brassica oleracea HOM05D000203 ORTHO05D000135 1.1e-54 216.5 114 94.7
Thhalv10003338m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.4e-38 162.2 114 75.4
Thhalv10000479m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 7.6e-32 140.6 114 68.4
AT2G24840 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 9.2e-30 133.7 114 66.7
Carub.0004s0446 Capsella rubella HOM05D000203 ORTHO05D000135 2.1e-29 132.5 115 66.1
AL4G15890 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 2.7e-29 132.1 114 67.5
CARHR116820 Cardamine hirsuta HOM05D000203 ORTHO05D000135 6.6e-28 127.5 112 65.2
Sp4g03860 Schrenkiella parvula HOM05D000203 ORTHO05D000135 7.3e-27 124.0 108 66.7
CARHR028570 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.3e-23 113.2 108 57.4
BcaB06g28019 Brassica carinata HOM05D000203 ORTHO05D000135 8.1e-18 94.0 69 73.9
BolC4t27018H Brassica oleracea HOM05D000203 ORTHO05D000135 8.1e-18 94.0 67 73.1
BcaC02g08396 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-17 93.6 67 71.6
C04p54730 Brassica napus HOM05D000203 ORTHO05D000135 1.1e-17 93.6 67 71.6
A04p19240 Brassica napus HOM05D000203 ORTHO05D000135 3.1e-17 92.0 66 72.7
BraA04t17524Z Brassica rapa HOM05D000203 ORTHO05D000135 3.1e-17 92.0 66 72.7
Aa31LG7G170 Aethionema arabicum HOM05D000203 ORTHO05D000135 3.0e-12 75.5 116 45.7
THA.LOC104807204 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 3.9e-12 75.1 123 42.3
QL11p028766 Quercus lobata HOM05D000203 ORTHO05D000135 1.6e-10 69.7 119 33.6
AL4G15770 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 6.2e-10 67.8 55 65.5
GSVIVG01037026001 Vitis vinifera HOM05D000203 ORTHO05D000135 6.9e-09 64.3 115 28.7
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 2.0e-08 62.8 117 32.5
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 2.0e-08 62.8 122 31.1
Dinv12564 Davidia involucrata HOM05D000203 ORTHO05D000135 2.6e-08 62.4 118 31.4
Manes.07G051700 Manihot esculenta HOM05D000203 ORTHO05D000135 3.4e-08 62.0 120 31.7
Hma1.2p1_1051F.1_g252230 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 4.5e-08 61.6 110 32.7
ECA238G3159 Erigeron canadensis HOM05D000203 ORTHO05D000135 5.8e-08 61.2 126 31.0
QL11p028754 Quercus lobata HOM05D000203 ORTHO05D000135 5.8e-08 61.2 113 30.1
Actinidia00343 Actinidia chinensis HOM05D001079 ORTHO05D000135 9.9e-08 60.5 116 31.0
QL11p028631 Quercus lobata HOM05D000203 ORTHO05D000135 1.3e-07 60.1 113 29.2
TWI59G1079 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.7e-07 59.7 123 31.7
TAR285G0001 Trochodendron aralioides HOM05D000203 ORTHO05D000135 2.2e-07 59.3 116 28.4
Atru.chr12.1519 Acer truncatum HOM05D000203 ORTHO05D000135 2.9e-07 58.9 108 33.3
Nn8g40832 Nelumbo nucifera HOM05D000203 ORTHO05D000135 4.9e-07 58.2 111 28.8
Solyc01g106710.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 4.9e-07 58.2 117 29.9
CSS0021382 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 8.4e-07 57.4 120 30.8
CSS0029942 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 8.4e-07 57.4 120 30.8
Ciclev10030387m.g Citrus clementina HOM05D000203 ORTHO05D000135 8.4e-07 57.4 95 32.6
Peaxi162Scf00249g00064 Petunia axillaris HOM05D000203 ORTHO05D000135 8.4e-07 57.4 121 31.4
Potri.009G084100 Populus trichocarpa HOM05D000203 ORTHO05D000135 8.4e-07 57.4 122 30.3
TWI59G0613 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 8.4e-07 57.4 124 29.8
Atru.chr12.1516 Acer truncatum HOM05D000203 ORTHO05D000135 1.1e-06 57.0 108 32.4
Prupe.8G152000 Prunus persica HOM05D000203 ORTHO05D000135 1.1e-06 57.0 136 32.4
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.1e-06 57.0 106 31.1
CSS0006714 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.4e-06 56.6 123 30.9
CAN.G730.23 Capsicum annuum HOM05D000203 ORTHO05D000135 1.4e-06 56.6 107 30.8
Ciclev10013802m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.4e-06 56.6 120 30.0
Prupe.2G047900 Prunus persica HOM05D000203 ORTHO05D000135 1.4e-06 56.6 71 39.4
CSS0008388 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.9e-06 56.2 123 30.9
CSS0044339 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.9e-06 56.2 123 30.9
Eucgr.I02506 Eucalyptus grandis HOM05D000203 ORTHO05D000135 1.9e-06 56.2 126 33.3
Hma1.2p1_0661F.1_g197940 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 2.4e-06 55.8 66 40.9
Hma1.2p1_1758F.1_g301156 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 2.4e-06 55.8 66 40.9
Lj9C337T7 Lonicera japonica HOM05D000203 ORTHO05D000135 2.4e-06 55.8 117 32.5
CSS0043673 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 3.2e-06 55.5 112 30.4
HanXRQChr05g0161331 Helianthus annuus HOM05D000203 ORTHO05D000135 3.2e-06 55.5 120 28.3
QL11p028776 Quercus lobata HOM05D000203 ORTHO05D000135 3.2e-06 55.5 122 31.1
Gohir.A03G213500 Gossypium hirsutum HOM05D000203 ORTHO05D000135 4.2e-06 55.1 80 36.2
Gohir.D02G235000 Gossypium hirsutum HOM05D000203 ORTHO05D000135 4.2e-06 55.1 80 36.2
Gorai.005G263100 Gossypium raimondii HOM05D000203 ORTHO05D000135 4.2e-06 55.1 80 36.2
PGSC0003DMG400044387 Solanum tuberosum HOM05D000203 ORTHO05D000135 5.5e-06 54.7 117 29.1
TWI14G1391 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 5.5e-06 54.7 99 35.4
BcaC05g28428 Brassica carinata HOM05D000203 ORTHO05D000135 7.1e-06 54.3 66 40.9
A05p29880 Brassica napus HOM05D000203 ORTHO05D000135 7.1e-06 54.3 64 43.8
C05p45090 Brassica napus HOM05D000203 ORTHO05D000135 7.1e-06 54.3 66 40.9
BolC5t33235H Brassica oleracea HOM05D000203 ORTHO05D000135 7.1e-06 54.3 66 40.9
CiPaw.05G021900 Carya illinoinensis HOM05D000203 ORTHO05D000135 7.1e-06 54.3 134 29.1
Ca_16299_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 7.1e-06 54.3 118 30.5
Hma1.2p1_0661F.1_g197960 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 7.1e-06 54.3 68 38.2
GSVIVG01037022001 Vitis vinifera HOM05D000203 ORTHO05D000135 7.1e-06 54.3 120 30.8
Ca_17913_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 9.3e-06 53.9 116 30.2
Thhalv10022102m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 9.3e-06 53.9 66 37.9
TAR285G0004 Trochodendron aralioides HOM05D000203 ORTHO05D000135 9.3e-06 53.9 116 31.0


User provided reference genes

Program Settings