Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 8.4e-163 578.2 676 100.0
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 3.8e-147 526.2 677 89.2
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 2.1e-137 493.8 655 89.9
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 2.5e-135 486.9 677 83.9
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 1.1e-133 481.5 529 97.7
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 2.9e-131 473.4 676 78.8
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 3.8e-131 473.0 335 90.7
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 1.6e-129 467.6 335 89.3
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 3.6e-129 466.5 530 92.1
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 1.5e-127 461.1 634 90.7
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 5.7e-127 459.1 335 88.7
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 1.3e-115 421.4 335 83.3
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 5.4e-101 372.9 344 75.0
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 2.0e-92 344.4 335 72.2
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 2.0e-92 344.4 335 71.3
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 2.7e-92 344.0 335 71.6
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 4.6e-92 343.2 336 71.7
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 4.6e-92 343.2 335 77.0
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 6.6e-91 339.3 335 71.9
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 3.3e-90 337.0 335 75.5
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 5.6e-90 336.3 320 79.4
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 7.3e-90 335.9 335 69.9
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 9.5e-90 335.5 337 70.9
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 9.5e-90 335.5 337 70.9
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 2.1e-89 334.3 335 75.2
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 2.1e-89 334.3 335 70.1
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 3.6e-89 333.6 321 73.8
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 6.2e-89 332.8 319 79.6
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 8.0e-89 332.4 335 76.1
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 3.1e-88 330.5 332 70.2
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 3.1e-88 330.5 335 75.5
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 4.0e-88 330.1 335 75.8
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 4.0e-88 330.1 320 72.8
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 4.0e-88 330.1 335 69.6
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 1.2e-87 328.6 335 75.5
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 1.2e-87 328.6 336 69.3
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 1.5e-87 328.2 336 69.9
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 2.0e-87 327.8 335 69.6
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 7.5e-87 325.9 336 67.9
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 8.3e-86 322.4 310 74.2
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 1.4e-85 321.6 339 69.6
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 7.0e-85 319.3 339 69.3
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 1.6e-84 318.2 304 74.7
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 1.6e-84 318.2 333 69.7
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 2.7e-84 317.4 314 72.0
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 3.5e-84 317.0 331 70.1
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 1.3e-83 315.1 337 67.4
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 1.7e-83 314.7 321 70.1
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 5.0e-83 313.2 296 75.0
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 1.9e-82 311.2 337 67.7
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 2.5e-82 310.8 338 68.0
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 7.3e-82 309.3 308 71.8
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 7.3e-82 309.3 308 71.8
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 1.2e-81 308.5 299 67.6
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 1.2e-81 308.5 333 66.4
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 4.7e-81 306.6 320 69.4
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 6.2e-81 306.2 296 73.3
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 1.1e-80 305.4 327 67.3
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 4.0e-80 303.5 304 70.4
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 4.0e-80 303.5 304 69.7
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 5.2e-80 303.1 296 74.0
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 1.2e-79 302.0 335 64.5
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 1.5e-79 301.6 307 70.0
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 3.4e-79 300.4 321 67.3
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 3.4e-79 300.4 304 68.8
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 5.8e-79 299.7 321 69.2
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 7.5e-79 299.3 296 73.3
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 9.8e-79 298.9 304 68.1
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 1.7e-78 298.1 304 67.8
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 2.2e-78 297.7 296 73.0
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 2.2e-78 297.7 343 64.7
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 2.9e-78 297.4 306 69.0
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 3.7e-78 297.0 314 67.8
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 4.9e-78 296.6 322 67.4
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 1.9e-77 294.7 321 65.4
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 4.1e-77 293.5 335 49.6
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 4.1e-77 293.5 337 72.1
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 4.1e-77 293.5 293 72.0
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 7.1e-77 292.7 310 68.1
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 1.6e-76 291.6 326 65.3
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 2.7e-76 290.8 308 62.0
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 1.0e-75 288.9 315 65.7
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 3.9e-75 287.0 320 65.9
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 5.1e-75 286.6 306 66.3
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 1.1e-74 285.4 323 64.7
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 4.3e-74 283.5 308 75.0
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 5.6e-74 283.1 336 62.8
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 9.5e-74 282.3 331 63.1
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 3.1e-72 277.3 304 66.8
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 4.4e-71 273.5 304 49.7
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 9.9e-71 272.3 354 46.0
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 1.7e-70 271.6 293 77.1
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 5.4e-69 266.5 307 63.8
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 9.2e-69 265.8 325 63.1
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 1.7e-67 261.5 314 56.7
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 1.1e-64 252.3 284 75.4
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 1.1e-61 242.3 292 62.7
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 2.9e-54 217.6 175 66.9
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 5.6e-50 203.4 196 86.2
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 5.6e-50 203.4 136 75.0
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 1.3e-49 202.2 147 67.3
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 3.4e-47 194.1 211 74.9
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 8.4e-46 189.5 155 62.6
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 4.2e-45 187.2 274 46.7
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 1.4e-37 162.2 80 95.0
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 2.3e-35 154.8 78 92.3
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 4.3e-34 150.6 124 62.1
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 1.9e-29 135.2 263 47.5
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 2.5e-29 134.8 103 68.0
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 1.8e-24 118.6 263 43.3
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 9.0e-24 116.3 128 75.8
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 2.6e-23 114.8 103 57.3
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 2.2e-22 111.7 262 47.3
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 3.9e-19 100.9 61 85.2
BolC6t37748H Brassica oleracea HOM05D000461 ORTHO05D001840 8.8e-11 73.2 43 83.7
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 1.5e-10 72.4 45 82.2


User provided reference genes

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