Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 8.0e-142 507.3 297 100.0
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 6.3e-139 497.7 297 97.6
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 4.5e-137 491.5 298 97.7
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 4.5e-137 491.5 298 97.7
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 4.5e-137 491.5 298 97.7
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 6.4e-123 444.5 297 89.2
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 9.9e-116 420.6 297 77.4
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.0e-112 409.1 297 84.5
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.3e-94 350.5 305 75.4
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 5.3e-93 345.1 304 75.3
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.5e-92 343.6 285 76.8
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.6e-89 333.6 269 78.8
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 5.1e-88 328.6 297 73.1
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 1.1e-82 310.8 304 70.1
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 5.6e-79 298.5 226 77.4
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 9.6e-79 297.7 305 68.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.8e-78 296.2 230 71.7
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.0e-75 287.7 251 72.1
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.1e-74 284.3 230 73.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 3.2e-74 282.7 303 65.3
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.6e-73 280.4 223 74.4
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.7e-73 279.6 236 64.4
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 7.9e-73 278.1 233 66.1
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 7.9e-73 278.1 293 64.8
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.0e-72 277.7 236 64.4
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.3e-72 277.3 288 56.2
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 2.5e-71 273.1 263 58.6
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 5.7e-71 271.9 266 62.4
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 5.7e-71 271.9 290 51.0
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 5.7e-71 271.9 264 56.1
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 9.7e-71 271.2 275 63.3
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.1e-69 267.7 239 59.8
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 4.1e-69 265.8 274 59.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 9.0e-69 264.6 231 62.8
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 2.6e-68 263.1 250 68.4
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 2.6e-68 263.1 230 62.2
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 5.0e-67 258.8 243 70.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 8.5e-67 258.1 221 64.7
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.1e-66 257.7 246 59.3
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.4e-66 257.3 289 51.2
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 4.2e-66 255.8 292 61.6
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 7.2e-66 255.0 301 48.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 1.2e-65 254.2 232 58.6
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 2.1e-65 253.4 231 65.8
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 7.9e-65 251.5 231 62.3
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.4e-64 250.8 240 62.9
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 3.0e-64 249.6 164 71.3
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 3.9e-64 249.2 230 65.2
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 3.9e-64 249.2 269 55.4
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 8.8e-64 248.1 294 56.5
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.5e-63 247.3 223 70.4
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 2.0e-63 246.9 171 67.8
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.3e-63 246.1 161 72.0
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.3e-62 244.2 294 54.4
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.8e-62 243.0 286 52.1
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 3.7e-62 242.7 259 56.0
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 8.2e-62 241.5 232 58.6
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 6.9e-61 238.4 232 57.3
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 2.0e-60 236.9 251 61.8
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 2.6e-60 236.5 240 61.7
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.9e-59 233.0 233 59.7
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 8.5e-59 231.5 283 55.1
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.9e-58 230.3 228 62.3
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.5e-58 229.9 221 62.4
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 4.2e-58 229.2 241 64.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 5.5e-58 228.8 304 53.9
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 4.7e-57 225.7 252 59.1
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 6.1e-57 225.3 298 48.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.0e-56 224.6 270 56.3
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.8e-56 223.8 238 55.5
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 2.3e-56 223.4 243 56.8
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.0e-56 223.0 234 56.8
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.0e-56 223.0 234 56.8
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 6.7e-56 221.9 215 61.4
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 2.6e-55 219.9 197 68.0
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 9.7e-55 218.0 232 60.3
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.7e-54 217.2 230 51.7
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.2e-54 216.9 227 55.5
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 6.3e-54 215.3 258 57.0
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 1.2e-52 211.1 219 58.4
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.9e-51 206.5 221 54.8
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 6.5e-51 205.3 243 57.2
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.9e-50 203.8 228 47.8
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.2e-50 202.6 212 60.4
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 5.5e-50 202.2 249 56.2
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.5e-50 202.2 238 57.6
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.6e-49 200.7 206 64.6
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 4.7e-49 199.1 252 42.9
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 6.1e-49 198.7 195 71.3
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 8.0e-49 198.4 252 42.9
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 8.8e-48 194.9 195 62.6
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 7.4e-47 191.8 243 52.3
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.3e-46 191.0 242 57.0
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.7e-46 190.7 219 61.6
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.7e-46 190.7 219 61.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.8e-46 189.1 227 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 4.1e-45 186.0 228 55.3
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.6e-44 184.1 239 53.6
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.6e-44 183.3 163 58.9
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.1e-42 177.9 161 57.8
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 9.4e-42 174.9 222 56.8
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 2.3e-40 170.2 194 62.9
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 7.5e-39 165.2 188 47.9
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 4.8e-38 162.5 122 63.9
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.1e-37 159.8 228 39.9
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 2.7e-36 156.8 172 44.2
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.8e-32 144.1 118 58.5
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 2.3e-32 143.7 107 61.7
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.1e-29 133.3 129 50.4
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 1.6e-25 120.9 215 45.1
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.6e-25 119.8 158 42.4
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 3.3e-18 96.7 105 72.4
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.2e-15 88.2 109 45.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.5e-15 87.8 102 44.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 3.5e-12 76.6 103 67.0
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.6e-11 72.4 43 74.4
A01p12600 Brassica napus HOM05D000022 ORTHO05D020144 2.8e-09 67.0 60 61.7
Medtr7g047660 Medicago truncatula HOM05D052963 ORTHO05D007970 1.4e-08 64.7 51 62.7
C01p15170 Brassica napus HOM05D000022 ORTHO05D020144 1.2e-07 61.6 68 52.9
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.5e-07 61.2 152 33.6
BraA01t01203Z Brassica rapa HOM05D006314 ORTHO05D020144 2.6e-07 60.5 50 68.0
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 2.2e-06 57.4 41 61.0
BolC1t01466H Brassica oleracea HOM05D000022 ORTHO05D020144 4.9e-06 56.2 53 58.5


User provided reference genes

Program Settings