Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 1.8e-87 325.9 159 100.0
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 1.8e-87 325.9 159 100.0
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 7.0e-84 313.9 159 96.2
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 2.6e-83 312.0 159 95.6
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 1.6e-80 302.8 159 93.7
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 2.2e-77 292.4 173 86.1
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 4.1e-68 261.5 159 81.1
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 1.6e-67 259.6 159 80.5
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 2.1e-64 249.2 159 78.0
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 1.3e-61 240.0 159 74.2
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 2.2e-61 239.2 159 74.8
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 7.0e-60 234.2 159 73.0
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 8.6e-58 227.3 157 71.3
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 3.5e-51 205.3 156 63.5
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 7.8e-51 204.1 158 63.9
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 3.6e-40 168.7 160 50.6
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 6.2e-40 167.9 149 51.7
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 1.1e-39 167.2 163 52.1
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 1.1e-39 167.2 151 51.0
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 2.3e-39 166.0 149 52.3
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 4.0e-39 165.2 149 52.3
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 5.2e-39 164.9 149 51.7
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 6.8e-39 164.5 156 51.9
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 8.9e-39 164.1 163 52.1
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 1.2e-38 163.7 155 52.3
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 1.2e-38 163.7 157 52.9
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 1.2e-38 163.7 154 51.3
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 1.5e-38 163.3 157 51.6
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 1.5e-38 163.3 154 53.9
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.6e-38 162.5 152 50.7
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.6e-38 162.5 152 50.7
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 2.6e-38 162.5 149 53.7
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 3.4e-38 162.2 153 51.0
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 3.4e-38 162.2 149 51.7
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 4.4e-38 161.8 152 52.6
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 5.8e-38 161.4 149 54.4
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 7.5e-38 161.0 158 50.0
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 7.5e-38 161.0 151 50.3
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 9.8e-38 160.6 152 53.3
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 9.8e-38 160.6 150 50.7
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 1.3e-37 160.2 149 52.3
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 1.3e-37 160.2 155 52.3
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 1.3e-37 160.2 148 51.4
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 1.7e-37 159.8 151 51.7
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 1.7e-37 159.8 155 51.6
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 2.2e-37 159.5 149 51.7
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 2.9e-37 159.1 151 51.7
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 2.9e-37 159.1 161 51.6
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 4.9e-37 158.3 154 50.0
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 4.9e-37 158.3 151 51.7
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 4.9e-37 158.3 149 51.7
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 6.4e-37 157.9 155 51.0
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 8.3e-37 157.5 147 51.7
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 2.4e-36 156.0 151 50.3
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 2.4e-36 156.0 158 50.6
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 2.4e-36 156.0 158 50.0
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 3.2e-36 155.6 155 47.1
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.1e-36 155.2 155 49.0
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 4.1e-36 155.2 155 50.3
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 5.4e-36 154.8 151 49.0
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 5.4e-36 154.8 152 49.3
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.6e-35 153.3 155 48.4
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 2.7e-35 152.5 155 49.0
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 2.7e-35 152.5 157 47.8
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 2.7e-35 152.5 161 52.2
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 3.5e-35 152.1 156 50.6
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 1.0e-34 150.6 118 55.9
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 1.3e-34 150.2 151 50.3
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 1.7e-34 149.8 155 47.7
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.7e-34 149.8 155 47.1
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 1.7e-34 149.8 157 49.0
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 2.3e-34 149.4 152 50.7
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 3.9e-34 148.7 151 51.7
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 8.6e-34 147.5 162 45.7
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 8.6e-34 147.5 152 47.4
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 8.6e-34 147.5 155 48.4
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 1.9e-33 146.4 117 57.3
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 2.5e-33 146.0 149 50.3
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 9.5e-33 144.1 147 48.3
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 9.5e-33 144.1 147 48.3
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 1.2e-32 143.7 162 45.7
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 1.6e-32 143.3 164 48.2
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 2.3e-31 139.4 156 48.1
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 4.0e-31 138.7 155 45.2
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 8.9e-31 137.5 120 48.3
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 2.6e-30 136.0 156 46.8
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 4.4e-30 135.2 155 45.2
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 7.6e-30 134.4 153 47.1
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 1.7e-29 133.3 153 47.1
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 1.7e-29 133.3 153 42.5
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 2.2e-29 132.9 156 46.2
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 2.9e-29 132.5 156 43.6
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 2.9e-29 132.5 117 48.7
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 2.9e-29 132.5 150 48.0
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 1.1e-28 130.6 149 42.3
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 1.9e-28 129.8 141 46.8
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 5.4e-28 128.3 124 49.2
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 6.6e-26 121.3 133 39.8
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 8.6e-26 120.9 148 45.9
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 5.6e-25 118.2 147 43.5
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 2.1e-24 116.3 149 41.6
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 6.2e-24 114.8 146 37.7
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 5.2e-23 111.7 155 38.7
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 2.0e-22 109.8 126 45.2
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 4.4e-22 108.6 162 38.9
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 7.6e-22 107.8 162 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 2.4e-20 102.8 149 34.2
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 4.2e-20 102.1 149 39.6
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 1.6e-19 100.1 104 47.1
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 6.2e-16 88.2 120 43.3
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 4.0e-15 85.5 157 35.0
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 2.4e-12 76.3 58 53.4
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 4.6e-11 72.0 100 36.0
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 7.3e-09 64.7 111 30.6
Prupe.1G461400 Prunus persica HOM05D002728 ORTHO05D002874 7.6e-06 54.7 120 26.7
PRCOL_00001098 Prasinoderma coloniale HOM05D007082 ORTHO05D008895 9.9e-06 54.3 162 27.8


User provided reference genes

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