Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p45470 Brassica napus HOM05D001537 ORTHO05D013980 2.3e-44 181.8 90 100.0
C06p54320 Brassica napus HOM05D001537 ORTHO05D002595 3.2e-41 171.4 87 96.6
BolC6t40443H Brassica oleracea HOM05D001537 ORTHO05D002595 3.2e-41 171.4 87 96.6
BcaC08g47564 Brassica carinata HOM05D001537 ORTHO05D002595 9.2e-33 143.3 85 84.7
Sp5g35730 Schrenkiella parvula HOM05D001537 ORTHO05D002595 1.7e-31 139.0 85 81.2
Thhalv10018072m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 2.5e-30 135.2 85 78.8
AL2G41590 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 1.2e-29 132.9 83 78.3
Carub.0002s2755 Capsella rubella HOM05D001537 ORTHO05D002595 1.6e-29 132.5 83 78.3
C06p28800 Brassica napus HOM05D001537 ORTHO05D002595 4.4e-27 124.4 84 73.8
A07p26410 Brassica napus HOM05D001537 ORTHO05D002595 8.3e-26 120.2 84 70.2
BraA07t30285Z Brassica rapa HOM05D001537 ORTHO05D002595 8.3e-26 120.2 84 70.2
CARHR074520 Cardamine hirsuta HOM05D001537 ORTHO05D002595 1.1e-25 119.8 83 71.1
Aa31LG4G260 Aethionema arabicum HOM05D001537 ORTHO05D002595 2.4e-25 118.6 85 69.4
BcaC08g45279 Brassica carinata HOM05D001537 ORTHO05D013980 4.6e-24 114.4 75 73.3
THA.LOC104812517 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 4.0e-20 101.3 81 61.7
Nn8g39217 Nelumbo nucifera HOM05D001537 ORTHO05D002595 7.3e-14 80.5 73 53.4
Gohir.A06G188300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 2.1e-13 79.0 85 47.1
QL05p024162 Quercus lobata HOM05D001537 ORTHO05D013980 4.7e-13 77.8 76 51.3
QL05p024197 Quercus lobata HOM05D001537 ORTHO05D002595 4.7e-13 77.8 76 51.3
Atru.chr1.3271 Acer truncatum HOM05D001537 ORTHO05D002595 8.1e-13 77.0 73 52.1
Actinidia08978 Actinidia chinensis HOM05D001537 ORTHO05D002595 1.8e-12 75.9 78 50.0
PSO210G1376 Papaver somniferum HOM05D001537 ORTHO05D002595 2.4e-12 75.5 71 54.9
Aqoxy7G03786 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 3.1e-12 75.1 79 46.8
Potri.001G180200 Populus trichocarpa HOM05D001537 ORTHO05D002595 9.0e-12 73.6 78 48.7
SGA_v2.0_scaffold37G14822 Striga asiatica HOM05D001537 ORTHO05D002595 9.0e-12 73.6 75 46.7
Lj3g0003193 Lotus japonicus HOM05D001537 ORTHO05D002595 2.0e-11 72.4 75 49.3
Duzib235G1517 Durio zibethinus HOM05D001537 ORTHO05D002595 2.6e-11 72.0 82 45.1
Gohir.D06G194400 Gossypium hirsutum HOM05D001537 ORTHO05D002595 2.6e-11 72.0 85 44.7
Manes.11G047500 Manihot esculenta HOM05D001537 ORTHO05D002595 4.4e-11 71.2 73 47.9
QL05p024080 Quercus lobata HOM05D001537 ORTHO05D013980 4.4e-11 71.2 89 44.9
Medtr2g102150 Medicago truncatula HOM05D001537 ORTHO05D002595 5.8e-11 70.9 80 46.2
CsaV3_7G033170 Cucumis sativus L. HOM05D001537 ORTHO05D002595 7.6e-11 70.5 77 44.2
Lalb_Chr22g0351281 Lupinus albus HOM05D001537 ORTHO05D002595 7.6e-11 70.5 77 45.5
PGR102G0923 Punica granatum HOM05D001537 ORTHO05D002595 7.6e-11 70.5 77 46.8
CAN.G438.67 Capsicum annuum HOM05D001537 ORTHO05D002595 1.3e-10 69.7 79 45.6
Cfa002066 Carpinus fangiana HOM05D001537 ORTHO05D002595 1.3e-10 69.7 79 45.6
Eucgr.F03013 Eucalyptus grandis HOM05D001537 ORTHO05D002595 1.3e-10 69.7 70 47.1
Hma1.2p1_0092F.1_g046630 Hydrangea macrophylla HOM05D001537 ORTHO05D013980 1.3e-10 69.7 76 46.1
Psat5g298960 Pisum sativum HOM05D001537 ORTHO05D002595 1.3e-10 69.7 80 45.0
TPR.G37206 Trifolium pratense HOM05D001537 ORTHO05D002595 1.3e-10 69.7 79 46.8
TPR.G37208 Trifolium pratense HOM05D001537 ORTHO05D002595 1.3e-10 69.7 80 45.0
Migut.I00865 Erythranthe guttata HOM05D001537 ORTHO05D002595 1.7e-10 69.3 74 45.9
MSTRG.11077 Avicennia marina HOM05D001537 ORTHO05D002595 2.2e-10 68.9 75 44.0
Solyc03g120200.2 Solanum lycopersicum HOM05D001537 ORTHO05D002595 2.2e-10 68.9 79 45.6
Sopen03g039070 Solanum pennellii HOM05D001537 ORTHO05D002595 2.2e-10 68.9 79 45.6
Ca_01115_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 3.8e-10 68.2 80 45.0
Sed0016827 Sechium edule HOM05D001537 ORTHO05D002595 3.8e-10 68.2 75 41.3
TWI12G1035 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 3.8e-10 68.2 74 44.6
Lsat_1_v5_gn_4_103661 Lactuca sativa HOM05D001537 ORTHO05D002595 4.9e-10 67.8 82 39.0
TAR636G3516 Trochodendron aralioides HOM05D001537 ORTHO05D002595 4.9e-10 67.8 73 46.6
Oeu063977.2 Olea europaea HOM05D001537 ORTHO05D002595 8.4e-10 67.0 70 47.1
Rhsim08G0221300 Rhododendron simsii HOM05D001537 ORTHO05D002595 8.4e-10 67.0 73 43.8
Gorai.010G228200 Gossypium raimondii HOM05D001537 ORTHO05D002595 1.1e-09 66.6 85 41.2
vmacro18913 Vaccinium macrocarpon HOM05D001537 ORTHO05D002595 1.1e-09 66.6 80 42.5
AUR62016445 Chenopodium quinoa HOM05D001537 ORTHO05D002595 2.4e-09 65.5 73 43.8
Glyma.13G359400 Glycine max HOM05D001537 ORTHO05D002595 2.4e-09 65.5 75 41.3
Nitab4.5_0000671g0080 Nicotiana tabacum HOM05D001537 ORTHO05D002595 2.4e-09 65.5 79 43.0
ATR1120G122 Amborella trichopoda HOM05D001537 ORTHO05D002595 3.2e-09 65.1 80 38.8
HanXRQChr09g0275231 Helianthus annuus HOM05D001537 ORTHO05D002595 3.2e-09 65.1 71 42.3
arahy.Tifrunner.gnm1.ann1.I8FNU5 Arachis hypogaea HOM05D001537 ORTHO05D002595 4.2e-09 64.7 83 42.2
arahy.Tifrunner.gnm1.ann1.YVS4XZ Arachis hypogaea HOM05D001537 ORTHO05D002595 4.2e-09 64.7 83 42.2
Prupe.3G071000 Prunus persica HOM05D001537 ORTHO05D002595 5.4e-09 64.3 74 47.3
Haze_16429 Corylus avellana HOM05D001537 ORTHO05D002595 1.2e-08 63.2 70 47.1
Peaxi162Scf00015g00339 Petunia axillaris HOM05D001537 ORTHO05D002595 1.2e-08 63.2 69 46.4
VMungo1080G0222 Vigna mungo HOM05D001537 ORTHO05D002595 1.2e-08 63.2 73 42.5
Nitab4.5_0005851g0070 Nicotiana tabacum HOM05D001537 ORTHO05D002595 1.6e-08 62.8 69 44.9
Phvul.005G171300 Phaseolus vulgaris HOM05D001537 ORTHO05D002595 2.1e-08 62.4 73 42.5
MD17G1195000 Malus domestica HOM05D001537 ORTHO05D002595 4.6e-08 61.2 69 47.8
AUR62011630 Chenopodium quinoa HOM05D001537 ORTHO05D002595 6.0e-08 60.8 64 45.3
ECA232G0385 Erigeron canadensis HOM05D001537 ORTHO05D002595 7.8e-08 60.5 73 39.7
RcHm_v2.0_Chr2g0137871 Rosa chinensis HOM05D001537 ORTHO05D002595 1.3e-07 59.7 69 46.4
CANSAT56G0841 Cannabis sativa HOM05D001537 ORTHO05D002595 1.7e-07 59.3 70 45.7
FvH4_6g31180 Fragaria vesca HOM05D001537 ORTHO05D002595 1.1e-06 56.6 69 43.5
FAN05G3427 Fragaria x ananassa HOM05D001537 ORTHO05D002595 1.1e-06 56.6 69 43.5
Aa31sc17G230 Aethionema arabicum HOM05D001537 ORTHO05D013980 1.5e-06 56.2 75 44.0
SHI10919 Sapria himalayana HOM05D001537 ORTHO05D013980 2.5e-06 55.5 62 45.2
Ah.01g021390 Amaranthus hybridus HOM05D001537 ORTHO05D002595 7.3e-06 53.9 59 47.5
Pp3c18_12550 Physcomitrium patens HOM05D001537 ORTHO05D002595 7.3e-06 53.9 77 36.4


User provided reference genes

Program Settings