Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 3.6e-101 371.7 202 100.0
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 3.6e-101 371.7 202 100.0
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 7.2e-94 347.4 202 94.6
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 7.2e-94 347.4 202 94.6
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 5.3e-89 331.3 195 93.8
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 1.2e-88 330.1 204 92.6
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 6.5e-87 324.3 202 89.1
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 7.2e-86 320.9 202 88.6
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 1.2e-85 320.1 202 88.6
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 1.2e-85 320.1 202 88.6
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 4.7e-85 318.2 202 87.6
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 2.0e-83 312.8 204 86.8
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 2.6e-83 312.4 203 88.7
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 2.4e-81 305.8 204 86.8
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 3.0e-76 288.9 203 82.8
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 1.2e-75 287.0 204 82.4
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 3.4e-75 285.4 204 82.4
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 1.1e-73 280.4 204 80.9
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 4.1e-73 278.5 204 80.4
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 2.5e-70 269.2 204 79.4
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 5.6e-70 268.1 198 77.3
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 6.4e-66 254.6 202 74.3
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 8.9e-60 234.2 200 70.0
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 1.7e-58 229.9 203 69.0
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 2.1e-56 223.0 200 67.0
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 2.3e-55 219.5 200 66.0
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 3.2e-49 199.1 214 61.2
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 2.1e-48 196.4 209 61.2
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 3.5e-48 195.7 203 59.1
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 7.8e-48 194.5 214 60.7
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 1.0e-47 194.1 206 61.7
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.0e-47 194.1 206 61.7
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 2.3e-47 193.0 211 59.7
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 5.1e-47 191.8 216 58.8
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 5.1e-47 191.8 210 57.6
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 6.6e-47 191.4 218 58.7
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 8.6e-47 191.0 214 59.3
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 1.1e-46 190.7 214 58.9
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 4.3e-46 188.7 195 60.0
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 4.3e-46 188.7 216 58.3
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 5.6e-46 188.3 207 58.5
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.6e-46 188.3 206 61.2
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 5.6e-46 188.3 211 56.9
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 7.3e-46 188.0 208 57.7
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 7.3e-46 188.0 200 59.0
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 9.6e-46 187.6 210 61.0
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 9.6e-46 187.6 206 61.2
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 9.6e-46 187.6 208 60.6
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.2e-45 187.2 206 60.7
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.2e-45 187.2 206 60.7
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 1.2e-45 187.2 209 61.2
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 1.6e-45 186.8 211 55.9
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 2.1e-45 186.4 204 57.8
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 2.8e-45 186.0 214 57.5
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 3.6e-45 185.7 209 57.9
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 8.1e-45 184.5 214 57.5
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 8.1e-45 184.5 218 56.9
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 8.1e-45 184.5 213 56.8
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 1.1e-44 184.1 213 54.0
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 1.4e-44 183.7 212 55.2
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.4e-44 183.0 207 55.6
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 2.4e-44 183.0 209 59.8
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 3.1e-44 182.6 218 56.9
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 3.1e-44 182.6 218 56.9
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 3.1e-44 182.6 207 57.5
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 4.0e-44 182.2 204 55.9
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 5.2e-44 181.8 214 57.0
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 6.8e-44 181.4 208 57.7
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 6.8e-44 181.4 218 56.4
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 6.8e-44 181.4 214 56.1
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 8.9e-44 181.0 214 55.6
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 8.9e-44 181.0 219 57.5
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 1.2e-43 180.6 211 56.9
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.5e-43 180.3 210 55.7
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 1.5e-43 180.3 210 54.3
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.5e-43 180.3 205 58.5
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.5e-43 180.3 210 56.2
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 2.0e-43 179.9 209 56.5
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 2.0e-43 179.9 219 55.7
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 2.6e-43 179.5 214 56.1
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 7.6e-43 177.9 214 55.6
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 7.6e-43 177.9 208 57.7
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 7.6e-43 177.9 206 54.9
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 7.6e-43 177.9 218 56.4
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 9.9e-43 177.6 208 56.2
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 9.9e-43 177.6 210 55.7
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 9.9e-43 177.6 210 56.7
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 9.9e-43 177.6 213 56.3
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 9.9e-43 177.6 209 56.5
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 2.2e-42 176.4 211 56.4
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 2.9e-42 176.0 211 54.0
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 3.8e-42 175.6 209 57.4
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 3.8e-42 175.6 207 55.6
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.8e-42 175.6 207 56.5
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 3.8e-42 175.6 215 55.3
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 4.9e-42 175.3 214 55.1
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 4.9e-42 175.3 210 56.7
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.4e-42 174.9 206 56.3
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 6.4e-42 174.9 215 54.9
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 8.4e-42 174.5 209 58.4
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 1.1e-41 174.1 206 53.4
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 1.1e-41 174.1 208 58.2
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 1.4e-41 173.7 207 54.1
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 1.4e-41 173.7 202 57.4
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.9e-41 173.3 205 58.0
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 3.2e-41 172.6 208 54.3
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 3.2e-41 172.6 214 53.7
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 4.2e-41 172.2 205 53.7
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 4.2e-41 172.2 218 52.8
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 5.4e-41 171.8 206 54.4
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 5.4e-41 171.8 209 56.5
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 9.3e-41 171.0 211 56.9
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.2e-40 170.6 207 53.1
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 1.6e-40 170.2 216 56.0
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 2.7e-40 169.5 208 54.8
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 4.6e-40 168.7 216 52.8
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 4.6e-40 168.7 214 51.4
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 7.8e-40 167.9 201 56.7
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.7e-39 166.8 169 63.3
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 3.0e-39 166.0 201 54.7
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 5.1e-39 165.2 212 54.7
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 5.1e-39 165.2 211 55.9
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 8.7e-39 164.5 198 55.1
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 9.6e-38 161.0 216 51.9
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 9.6e-38 161.0 215 53.5
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 1.6e-37 160.2 215 53.0
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.1e-36 157.5 193 54.4
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 3.1e-36 156.0 211 52.6
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 3.1e-36 156.0 212 50.5
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 4.0e-36 155.6 208 52.9
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 6.9e-36 154.8 216 52.3
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 3.4e-35 152.5 120 68.3
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 1.9e-33 146.7 157 56.1
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 1.9e-30 136.7 211 46.4
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 4.3e-30 135.6 149 55.0
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 4.3e-30 135.6 176 52.3
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 9.0e-28 127.9 155 47.7
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 1.5e-27 127.1 182 51.1
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 5.8e-27 125.2 152 52.0
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 1.3e-26 124.0 184 50.5
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 4.9e-26 122.1 170 45.3
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 8.4e-26 121.3 155 47.7
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 3.2e-25 119.4 188 47.3
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 2.1e-21 106.7 190 41.6
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 8.1e-21 104.8 141 46.8
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 1.4e-20 104.0 201 41.3
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 3.1e-20 102.8 214 39.7
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.5e-19 100.5 144 50.0
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.6e-16 90.5 184 40.8
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 1.9e-14 83.6 85 56.5
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 7.4e-14 81.6 140 45.0
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.2e-13 78.6 110 50.9
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 1.1e-12 77.8 132 39.4
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.4e-12 77.4 124 48.4
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 4.1e-12 75.9 135 44.4
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 6.9e-12 75.1 70 58.6
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 9.0e-12 74.7 119 42.9
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.4e-11 72.8 64 59.4
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 3.2e-09 66.2 148 33.8
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 1.0e-07 61.2 151 35.8


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