Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p32110 Brassica napus HOM05D004285 ORTHO05D005176 6.6e-48 193.7 100 100.0
A06p05780 Brassica napus HOM05D004285 ORTHO05D005176 7.3e-47 190.3 100 98.0
A08p30650 Brassica napus HOM05D004285 ORTHO05D005176 1.7e-43 179.1 97 94.8
BcaB02g09769 Brassica carinata HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
BcaC01g02639 Brassica carinata HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
A06p30500 Brassica napus HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
C03p62560 Brassica napus HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
BolC3t18513H Brassica oleracea HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
BraA06t25999Z Brassica rapa HOM05D004285 ORTHO05D005176 1.4e-13 79.7 55 76.4
AT5G63880 Arabidopsis thaliana HOM05D004285 ORTHO05D005176 6.9e-13 77.4 56 73.2
Sp2g26940 Schrenkiella parvula HOM05D004285 ORTHO05D005176 9.0e-13 77.0 55 74.5
AL697U10010 Arabidopsis lyrata HOM05D004285 ORTHO05D005176 1.5e-12 76.3 57 71.9
BcaNung04632 Brassica carinata HOM05D004285 ORTHO05D005176 2.0e-12 75.9 55 72.7
BcaNung04637 Brassica carinata HOM05D004285 ORTHO05D005176 2.0e-12 75.9 55 72.7
Carub.0008s2465 Capsella rubella HOM05D004285 ORTHO05D005176 3.4e-12 75.1 55 72.7
CARHR277780 Cardamine hirsuta HOM05D004285 ORTHO05D005176 7.6e-12 73.9 55 70.9
Thhalv10004899m.g Eutrema salsugineum HOM05D004285 ORTHO05D005176 7.6e-12 73.9 55 70.9
Aa31LG1G18000 Aethionema arabicum HOM05D004285 ORTHO05D005176 1.0e-11 73.6 55 70.9
CARHR204160 Cardamine hirsuta HOM05D004285 ORTHO05D005176 1.0e-11 73.6 52 75.0
AL6G19650 Arabidopsis lyrata HOM05D004285 ORTHO05D005176 1.7e-11 72.8 55 69.1
AT5G09260 Arabidopsis thaliana HOM05D004285 ORTHO05D005176 1.7e-11 72.8 55 69.1
Cpa.g.sc37.8 Carica papaya HOM05D004285 ORTHO05D005176 1.1e-10 70.1 58 63.8
FAN12G2135 Fragaria x ananassa HOM05D004285 ORTHO05D005176 1.1e-10 70.1 53 71.7
FvH4_4g10490 Fragaria vesca HOM05D004285 ORTHO05D005176 3.2e-10 68.6 58 63.8
FAN12G0473 Fragaria x ananassa HOM05D004285 ORTHO05D005176 3.2e-10 68.6 58 63.8
FAN22G0010 Fragaria x ananassa HOM05D004285 ORTHO05D005176 3.2e-10 68.6 58 63.8
MD15G1135100 Malus domestica HOM05D004285 ORTHO05D005176 3.2e-10 68.6 58 63.8
Manes.06G003800 Manihot esculenta HOM05D004285 ORTHO05D005176 4.2e-10 68.2 58 60.3
PSO407G0164 Papaver somniferum HOM05D004285 ORTHO05D005176 4.2e-10 68.2 55 65.5
RcHm_v2.0_Chr4g0406031 Rosa chinensis HOM05D004285 ORTHO05D005176 4.2e-10 68.2 55 67.3
Sed0015518 Sechium edule HOM05D004285 ORTHO05D005176 4.2e-10 68.2 56 62.5
TWI79G0936 Tripterygium wilfordii HOM05D004285 ORTHO05D005176 4.2e-10 68.2 55 65.5
Duzib264G0533 Durio zibethinus HOM05D004285 ORTHO05D005176 5.5e-10 67.8 58 62.1
Prupe.4G274300 Prunus persica HOM05D004285 ORTHO05D005176 5.5e-10 67.8 58 62.1
Haze_25379 Corylus avellana HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Glyma.04G210200 Glycine max HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Glyma.06G155800 Glycine max HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
HanXRQChr09g0241311 Helianthus annuus HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 58.6
Lalb_Chr08g0238191 Lupinus albus HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Lalb_Chr11g0068611 Lupinus albus HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Oeu022909.3 Olea europaea HOM05D004285 ORTHO05D005176 7.1e-10 67.4 64 56.2
PSO170G3147 Papaver somniferum HOM05D004285 ORTHO05D005176 7.1e-10 67.4 55 65.5
PSO675G1889 Papaver somniferum HOM05D004285 ORTHO05D005176 7.1e-10 67.4 55 65.5
Phvul.009G154500 Phaseolus vulgaris HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Psat5g059640 Pisum sativum HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Potri.005G067700 Populus trichocarpa HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
PGR102G2430 Punica granatum HOM05D004285 ORTHO05D005176 7.1e-10 67.4 55 63.6
Sabra05G0055600 Salix brachista HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
TPR.G24222 Trifolium pratense HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
TPR.G33552 Trifolium pratense HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
TWI75G0304 Tripterygium wilfordii HOM05D004285 ORTHO05D005176 7.1e-10 67.4 55 63.6
VMungo1309G0657 Vigna mungo HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
VMungo1309G3080 Vigna mungo HOM05D004285 ORTHO05D005176 7.1e-10 67.4 58 60.3
Ca_16982_v3 Cicer arietinum L. HOM05D004285 ORTHO05D005176 9.3e-10 67.0 58 58.6
MBI04_g38139_MAGBIO Magnolia biondii HOM05D004285 ORTHO05D005176 9.3e-10 67.0 58 60.3
Atru.chr4.994 Acer truncatum HOM05D004285 ORTHO05D005176 1.2e-09 66.6 58 58.6
Medtr3g096680 Medicago truncatula HOM05D004285 ORTHO05D005176 1.2e-09 66.6 52 67.3
GSVIVG01029745001 Vitis vinifera HOM05D004285 ORTHO05D005176 1.2e-09 66.6 58 60.3
Cc03_g16000 Coffea canephora HOM05D004285 ORTHO05D005176 1.6e-09 66.2 58 58.6
CsaV3_4G030940 Cucumis sativus L. HOM05D004285 ORTHO05D005176 1.6e-09 66.2 56 60.7
Gohir.A05G382800 Gossypium hirsutum HOM05D004285 ORTHO05D005176 1.6e-09 66.2 55 63.6
Gohir.D04G032400 Gossypium hirsutum HOM05D004285 ORTHO05D005176 1.6e-09 66.2 55 63.6
Gorai.012G036800 Gossypium raimondii HOM05D004285 ORTHO05D005176 1.6e-09 66.2 55 63.6
Potri.007G101500 Populus trichocarpa HOM05D004285 ORTHO05D005176 1.6e-09 66.2 58 60.3
Sabra07G0083700 Salix brachista HOM05D004285 ORTHO05D005176 1.6e-09 66.2 69 55.1
Thecc.01G137100 Theobroma cacao HOM05D004285 ORTHO05D005176 1.6e-09 66.2 55 63.6
CiPaw.03G117900 Carya illinoinensis HOM05D004285 ORTHO05D005176 2.1e-09 65.9 55 61.8
MBI18_g28836_MAGBIO Magnolia biondii HOM05D004285 ORTHO05D005176 2.1e-09 65.9 75 50.7
QL10p041258 Quercus lobata HOM05D004285 ORTHO05D005176 2.1e-09 65.9 55 61.8
QL10p041526 Quercus lobata HOM05D004285 ORTHO05D005176 2.1e-09 65.9 55 61.8
TAR376G0205 Trochodendron aralioides HOM05D004285 ORTHO05D005176 2.1e-09 65.9 58 58.6
Cfa002202 Carpinus fangiana HOM05D004285 ORTHO05D005176 2.7e-09 65.5 55 63.6
Peaxi162Scf01205g00036 Petunia axillaris HOM05D004285 ORTHO05D005176 2.7e-09 65.5 54 63.0
CANSAT80G1716 Cannabis sativa HOM05D004285 ORTHO05D005176 3.5e-09 65.1 58 56.9
ClCG04G001580 Citrullus lanatus HOM05D004285 ORTHO05D005176 3.5e-09 65.1 52 65.4
Ciclev10002389m.g Citrus clementina HOM05D004285 ORTHO05D005176 3.5e-09 65.1 58 58.6
TAR628G0040 Trochodendron aralioides HOM05D004285 ORTHO05D005176 3.5e-09 65.1 58 56.9
Aqoxy6G00309 Aquilegia oxysepala HOM05D004285 ORTHO05D005176 4.6e-09 64.7 55 61.8
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 4.6e-09 64.7 54 61.1
Dinv12984 Davidia involucrata HOM05D004285 ORTHO05D005176 4.6e-09 64.7 58 56.9
Lj1g0004585 Lotus japonicus HOM05D004285 ORTHO05D005176 4.6e-09 64.7 58 56.9
Lj4g0011662 Lotus japonicus HOM05D004285 ORTHO05D005176 4.6e-09 64.7 58 56.9
Sopen12g032480 Solanum pennellii HOM05D004285 ORTHO05D005176 4.6e-09 64.7 58 56.9
ATR0706G129 Amborella trichopoda HOM05D004285 ORTHO05D005176 6.0e-09 64.3 58 56.9
MELO3C008970.2 Cucumis melo HOM05D004285 ORTHO05D005176 6.0e-09 64.3 56 58.9
Eucgr.H05139 Eucalyptus grandis HOM05D004285 ORTHO05D005176 6.0e-09 64.3 55 60.0
Nitab4.5_0000668g0170 Nicotiana tabacum HOM05D004285 ORTHO05D005176 6.0e-09 64.3 58 56.9
Nitab4.5_0009744g0020 Nicotiana tabacum HOM05D004285 ORTHO05D005176 6.0e-09 64.3 58 56.9
Peaxi162Scf00169g00092 Petunia axillaris HOM05D004285 ORTHO05D005176 6.0e-09 64.3 58 56.9
Sc03g0010160 Simmondsia chinensis HOM05D004285 ORTHO05D005176 6.0e-09 64.3 55 60.0
AL8G41110 Arabidopsis lyrata HOM05D004285 ORTHO05D005176 7.9e-09 63.9 58 60.3
ECA234G4310 Erigeron canadensis HOM05D004285 ORTHO05D005176 7.9e-09 63.9 58 53.4
Lj2A489T51 Lonicera japonica HOM05D004285 ORTHO05D005176 7.9e-09 63.9 52 61.5
CDE08G1470 Ceratophyllum demersum HOM05D004285 ORTHO05D005176 1.0e-08 63.5 55 58.2
Nitab4.5_0000013g0100 Nicotiana tabacum HOM05D004285 ORTHO05D005176 1.0e-08 63.5 52 63.5
Oeu050306.1 Olea europaea HOM05D004285 ORTHO05D005176 1.0e-08 63.5 55 58.2
SGA_v2.0_scaffold12G06217 Striga asiatica HOM05D004285 ORTHO05D005176 1.0e-08 63.5 58 55.2
AUR62012692 Chenopodium quinoa HOM05D004285 ORTHO05D005176 1.3e-08 63.2 55 60.0
AUR62021963 Chenopodium quinoa HOM05D004285 ORTHO05D005176 1.3e-08 63.2 55 60.0
Hund21406 Selenicereus undatus HOM05D004285 ORTHO05D005176 1.3e-08 63.2 56 57.1
EL10Ac8g20044 Beta vulgaris HOM05D004285 ORTHO05D005176 1.8e-08 62.8 55 60.0
Duzib187G0355 Durio zibethinus HOM05D004285 ORTHO05D005176 1.8e-08 62.8 58 56.9
HPP92_022156 Vanilla planifolia HOM05D004285 ORTHO05D005176 1.8e-08 62.8 55 60.0
Aa31LG3G17740 Aethionema arabicum HOM05D004285 ORTHO05D005176 2.3e-08 62.4 55 61.8
MSTRG.22052 Avicennia marina HOM05D004285 ORTHO05D005176 3.9e-08 61.6 58 53.4
Migut.G00927 Erythranthe guttata HOM05D004285 ORTHO05D005176 3.9e-08 61.6 54 59.3
SMO232G0091 Selaginella moellendorffii HOM05D004285 ORTHO05D005176 3.9e-08 61.6 58 55.2
CSS0033426 Camellia sinensis var. sinensis HOM05D004285 ORTHO05D005176 6.7e-08 60.8 55 58.2
CDE02G0727 Ceratophyllum demersum HOM05D004285 ORTHO05D005176 6.7e-08 60.8 55 54.5
Actinidia20030 Actinidia chinensis HOM05D004285 ORTHO05D005176 8.7e-08 60.5 55 58.2
Carub.0006s0781 Capsella rubella HOM05D004285 ORTHO05D005176 1.1e-07 60.1 55 60.0
Thhalv10014638m.g Eutrema salsugineum HOM05D004285 ORTHO05D005176 1.1e-07 60.1 55 60.0
Sp6g34050 Schrenkiella parvula HOM05D004285 ORTHO05D005176 1.1e-07 60.1 55 60.0
unitig_736.g22477 Utricularia gibba HOM05D004285 ORTHO05D005176 1.5e-07 59.7 58 53.4
BcaB08g37222 Brassica carinata HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
BraA10t44845Z Brassica rapa HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
THA.LOC104818421 Tarenaya hassleriana HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
THA.LOC104819347 Tarenaya hassleriana HOM05D004285 ORTHO05D005176 4.3e-07 58.2 55 58.2
arahy.Tifrunner.gnm1.ann1.054DCV Arachis hypogaea HOM05D004285 ORTHO05D005176 7.4e-07 57.4 58 53.4
arahy.Tifrunner.gnm1.ann1.GQS5IM Arachis hypogaea HOM05D004285 ORTHO05D005176 7.4e-07 57.4 58 53.4
DCAR_001476 Daucus carota HOM05D004285 ORTHO05D005176 9.6e-07 57.0 58 51.7
Zm00001eb246180 Zea mays HOM05D004285 ORTHO05D005176 9.6e-07 57.0 59 50.8
AagrBONN_evm.TU.Sc2ySwM_228.3779 Anthoceros agrestis HOM05D004285 ORTHO05D005176 2.8e-06 55.5 59 49.2
COL.COLO4_35812 Corchorus olitorius HOM05D003519 ORTHO05D004443 2.8e-06 55.5 63 49.2
MBI04_g07580_MAGBIO Magnolia biondii HOM05D004285 ORTHO05D005176 2.8e-06 55.5 58 53.4
AagrBONN_evm.TU.Sc2ySwM_117.2591 Anthoceros agrestis HOM05D004285 ORTHO05D005176 3.7e-06 55.1 59 49.2
Mapoly0073s0065 Marchantia polymorpha HOM05D004285 ORTHO05D005176 3.7e-06 55.1 56 48.2
CAN.G607.7 Capsicum annuum HOM05D004285 ORTHO05D005176 4.8e-06 54.7 47 57.4
Zm00001eb183830 Zea mays HOM05D004285 ORTHO05D005176 4.8e-06 54.7 58 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1024 Anthoceros agrestis HOM05D004285 ORTHO05D005176 8.2e-06 53.9 61 47.5


User provided reference genes

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