Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p20700 Brassica napus HOM05D005846 ORTHO05D007369 1.4e-69 266.5 170 100.0
C09p68450 Brassica napus HOM05D005846 ORTHO05D007369 3.5e-33 145.6 82 93.9
BolC9t59592H Brassica oleracea HOM05D022734 ORTHO05D024517 8.1e-22 107.8 53 98.1
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 2.3e-16 89.7 86 58.1
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 5.1e-16 88.6 86 57.0
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 2.5e-15 86.3 52 80.8
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 2.5e-15 86.3 52 80.8
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 2.5e-15 86.3 52 80.8
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 2.5e-15 86.3 52 80.8
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 2.5e-15 86.3 52 80.8
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 5.6e-15 85.1 52 78.8
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 5.6e-15 85.1 52 78.8
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 5.6e-15 85.1 52 75.0
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 5.6e-15 85.1 52 78.8
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 9.6e-15 84.3 52 76.9
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 9.6e-15 84.3 52 76.9
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 1.6e-14 83.6 52 76.9
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 1.6e-14 83.6 52 76.9
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 2.1e-14 83.2 52 76.9
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 2.1e-14 83.2 70 64.3
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 2.1e-14 83.2 69 60.9
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 2.1e-14 83.2 52 75.0
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 2.8e-14 82.8 52 75.0
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 2.8e-14 82.8 52 75.0
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 2.8e-14 82.8 69 60.9
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 2.8e-14 82.8 70 64.3
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 2.8e-14 82.8 52 76.9
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 2.8e-14 82.8 52 75.0
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 3.6e-14 82.4 52 75.0
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 3.6e-14 82.4 52 75.0
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 4.8e-14 82.0 52 75.0
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 75.0
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 75.0
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 75.0
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 75.0
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 75.0
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 6.2e-14 81.6 52 73.1
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 8.1e-14 81.3 52 71.2
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 8.1e-14 81.3 52 73.1
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 8.1e-14 81.3 52 75.0
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 8.1e-14 81.3 52 75.0
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 1.1e-13 80.9 67 62.7
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 1.4e-13 80.5 52 73.1
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 1.8e-13 80.1 52 73.1
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 1.8e-13 80.1 51 74.5
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.8e-13 80.1 51 74.5
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.8e-13 80.1 51 74.5
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.8e-13 80.1 51 74.5
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 1.8e-13 80.1 51 74.5
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.4e-13 79.7 48 77.1
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 2.4e-13 79.7 52 73.1
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 2.4e-13 79.7 52 73.1
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 3.1e-13 79.3 52 71.2
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 3.1e-13 79.3 49 75.5
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 3.1e-13 79.3 127 53.5
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 4.0e-13 79.0 52 73.1
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 5.3e-13 78.6 48 72.9
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 5.3e-13 78.6 77 58.4
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.3e-13 78.6 51 72.5
HanXRQChr12g0364311 Helianthus annuus HOM05D005846 ORTHO05D007369 5.3e-13 78.6 48 77.1
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 5.3e-13 78.6 52 73.1
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 5.3e-13 78.6 51 72.5
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 6.9e-13 78.2 52 73.1
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 9.0e-13 77.8 52 71.2
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 9.0e-13 77.8 52 71.2
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 1.2e-12 77.4 47 76.6
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.5e-12 77.0 51 70.6
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 1.5e-12 77.0 52 69.2
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 2.0e-12 76.6 52 71.2
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.0e-12 76.6 77 57.1
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 2.0e-12 76.6 52 69.2
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 2.0e-12 76.6 52 69.2
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 2.6e-12 76.3 127 50.4
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 2.6e-12 76.3 59 64.4
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 2.6e-12 76.3 52 71.2
Cpa.g.sc22.5 Carica papaya HOM05D005846 ORTHO05D007369 3.4e-12 75.9 49 73.5
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 3.4e-12 75.9 45 80.0
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 3.4e-12 75.9 52 71.2
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 3.4e-12 75.9 69 59.4
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 3.4e-12 75.9 52 67.3
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 7.6e-12 74.7 52 67.3
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 7.6e-12 74.7 54 66.7
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 7.6e-12 74.7 52 67.3
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 1.3e-11 73.9 52 63.5
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 2.2e-11 73.2 55 67.3
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 2.9e-11 72.8 52 67.3
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 2.9e-11 72.8 52 67.3
QL05p084337 Quercus lobata HOM05D005846 ORTHO05D007369 2.9e-11 72.8 45 73.3
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 4.9e-11 72.0 130 50.8
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 8.4e-11 71.2 52 63.5
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 8.4e-11 71.2 131 52.7
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 8.4e-11 71.2 120 56.7
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 1.4e-10 70.5 64 59.4
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 1.9e-10 70.1 126 42.1
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 2.4e-10 69.7 52 61.5
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 3.2e-10 69.3 127 52.0
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 7.1e-10 68.2 127 50.4
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 1.6e-09 67.0 114 53.5
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 4.6e-09 65.5 52 55.8
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 1.0e-08 64.3 135 35.6
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 1.3e-08 63.9 52 59.6
HPP92_002751 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.3e-08 63.9 44 65.9
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.3e-08 63.9 64 53.1
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 1.1e-07 60.8 52 53.8
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 1.9e-07 60.1 36 77.8
SalBow5G1215 Salvia bowleyana HOM05D005846 ORTHO05D007369 3.3e-07 59.3 33 81.8


User provided reference genes

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