Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p13350 Brassica napus HOM05D007973 ORTHO05D011363 1.5e-139 499.6 263 100.0
BraA05t20274Z Brassica rapa HOM05D007973 ORTHO05D011363 1.5e-139 499.6 263 100.0
A05p12940 Brassica napus HOM05D007973 ORTHO05D011363 1.1e-118 430.3 269 86.2
BraA05t20234Z Brassica rapa HOM05D007973 ORTHO05D011363 1.1e-118 430.3 269 86.2
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 1.4e-110 403.3 271 83.0
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 3.9e-108 395.2 274 78.8
BcaB02g10454 Brassica carinata HOM05D007973 ORTHO05D011363 1.8e-105 386.3 274 78.5
BcaC02g11347 Brassica carinata HOM05D007973 ORTHO05D011363 4.4e-91 338.6 272 72.4
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 2.7e-72 276.2 312 54.8
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 1.6e-69 266.9 318 53.8
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 1.0e-68 264.2 335 51.6
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 1.2e-67 260.8 323 52.6
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 1.2e-67 260.8 323 52.6
C04p17030 Brassica napus HOM05D007973 ORTHO05D011363 1.4e-65 253.8 264 60.2
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 5.4e-65 251.9 320 51.9
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 5.4e-65 251.9 320 51.9
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 3.8e-63 245.7 312 51.9
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 3.8e-63 245.7 312 51.9
BcaC02g11344 Brassica carinata HOM05D007973 ORTHO05D011363 9.2e-57 224.6 303 50.5
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 2.3e-52 209.9 372 40.6
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 5.0e-47 192.2 303 45.5
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 5.0e-47 192.2 303 45.5
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 9.5e-46 188.0 324 40.4
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.0e-43 180.3 345 41.2
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.4e-41 173.3 345 38.6
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.7e-40 169.9 345 38.8
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 2.1e-37 160.2 342 37.7
BolC8t48474H Brassica oleracea HOM05D007973 ORTHO05D011363 7.8e-32 141.7 242 45.5
BolC8t48477H Brassica oleracea HOM05D007973 ORTHO05D011363 1.7e-31 140.6 242 45.5
BcaC07g38070 Brassica carinata HOM05D007973 ORTHO05D011363 2.3e-31 140.2 263 43.0
THA.LOC104819096 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.7e-24 116.7 219 37.4
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 3.5e-24 116.3 223 36.8
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 3.5e-24 116.3 223 36.8
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.3e-23 113.6 346 33.8
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 3.1e-20 103.2 187 38.0
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 2.6e-19 100.1 108 52.8
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.6e-19 100.1 91 58.2
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.7e-18 97.4 87 58.6
BcaB01g03935 Brassica carinata HOM05D007973 ORTHO05D011027 6.4e-18 95.5 139 41.7
AL4G28640 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.4e-17 94.4 89 53.9
A03p18360 Brassica napus HOM05D007973 ORTHO05D011027 1.9e-17 94.0 138 43.5
BraA03t11099Z Brassica rapa HOM05D007973 ORTHO05D011027 2.4e-17 93.6 138 43.5
BcaC01g05861 Brassica carinata HOM05D007973 ORTHO05D011027 3.2e-17 93.2 88 54.5
C03p21640 Brassica napus HOM05D007973 ORTHO05D011027 3.2e-17 93.2 88 54.5
BolC3t14548H Brassica oleracea HOM05D007973 ORTHO05D011027 3.2e-17 93.2 88 54.5
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 4.2e-17 92.8 90 48.9
BcaB01g03937 Brassica carinata HOM05D007973 ORTHO05D011027 5.4e-17 92.4 88 54.5
BcaB01g03938 Brassica carinata HOM05D007973 ORTHO05D011027 5.4e-17 92.4 88 54.5
BcaC01g05887 Brassica carinata HOM05D007973 ORTHO05D011027 5.4e-17 92.4 88 54.5
C03p21430 Brassica napus HOM05D007973 ORTHO05D011027 5.4e-17 92.4 88 54.5
BolC3t14526H Brassica oleracea HOM05D007973 ORTHO05D011027 5.4e-17 92.4 88 54.5
AT2G33090 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 7.1e-17 92.0 89 50.6
Aa31LG10G13500 Aethionema arabicum HOM05D007973 ORTHO05D011027 9.3e-17 91.7 127 44.1
CARHR120790 Cardamine hirsuta HOM05D007973 ORTHO05D011027 4.6e-16 89.4 137 41.6
THA.LOC104798702 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.0e-15 88.2 93 52.7
THA.LOC104813254 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.8e-15 87.4 119 44.5
Aa31LG10G13910 Aethionema arabicum HOM05D007973 ORTHO05D011027 6.7e-15 85.5 79 55.7
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 8.7e-15 85.1 106 46.2
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-14 84.7 105 46.7
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 1.1e-14 84.7 105 46.7
CARHR123860 Cardamine hirsuta HOM05D007973 ORTHO05D011363 2.8e-13 80.1 130 42.3
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-12 78.2 83 51.8
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-12 78.2 83 51.8
Thhalv10024105m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.4e-12 77.0 105 45.7
Cpa.g.sc17.131 Carica papaya HOM05D002276 ORTHO05D002381 6.9e-12 75.5 103 45.6
Sp4g14560 Schrenkiella parvula HOM05D007973 ORTHO05D011363 1.2e-11 74.7 75 49.3
Cpa.g.sc17.122 Carica papaya HOM05D002276 ORTHO05D002381 1.7e-10 70.9 94 43.6
Thhalv10023971m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.7e-10 70.9 73 50.7
Cpa.g.c31254 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-10 70.5 83 44.6
Cpa.g.c34878 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-10 70.5 83 44.6
Cpa.g.sc17.144 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-10 70.5 83 44.6
Cpa.g.c30173.2 Carica papaya HOM05D002276 ORTHO05D002381 4.9e-10 69.3 83 43.4
Cpa.g.c40325 Carica papaya HOM05D002276 ORTHO05D002381 4.9e-10 69.3 83 43.4
Cpa.g.sc17.145 Carica papaya HOM05D002276 ORTHO05D002381 8.4e-10 68.6 83 43.4
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 1.1e-09 68.2 83 42.2
Cpa.g.sc17.136 Carica papaya HOM05D002276 ORTHO05D002381 2.4e-09 67.0 86 45.3
PGR031G2695 Punica granatum HOM05D002276 ORTHO05D002381 2.4e-09 67.0 90 43.3
Cpa.g.c27218.2 Carica papaya HOM05D002276 ORTHO05D002381 3.2e-09 66.6 83 42.2
Sp4g15420 Schrenkiella parvula HOM05D007973 ORTHO05D011027 2.1e-08 63.9 100 40.0
Cpa.g.sc17.143 Carica papaya HOM05D007973 ORTHO05D011027 4.6e-08 62.8 79 44.3
Cpa.g.sc736.3 Carica papaya HOM05D002276 ORTHO05D002381 4.6e-08 62.8 88 38.6
Cpa.g.c41267 Carica papaya HOM05D002276 ORTHO05D002381 6.0e-08 62.4 77 45.5
TAR623G1532 Trochodendron aralioides HOM05D002276 ORTHO05D002381 6.0e-08 62.4 90 40.0
Atru.chr8.94 Acer truncatum HOM05D002276 ORTHO05D002381 1.0e-07 61.6 89 42.7
Aa31LG5G23370 Aethionema arabicum HOM05D002276 ORTHO05D002381 1.0e-07 61.6 129 31.0
Ciclev10011982m.g Citrus clementina HOM05D002276 ORTHO05D002381 1.3e-07 61.2 90 41.1
Thecc.04G150200 Theobroma cacao HOM05D002276 ORTHO05D002381 1.3e-07 61.2 90 40.0
Cpa.g.sc956.1 Carica papaya HOM05D002276 ORTHO05D002381 2.3e-07 60.5 121 36.4
Sp4g20900 Schrenkiella parvula HOM05D002276 ORTHO05D002381 3.0e-07 60.1 123 33.3
TAR369G0520 Trochodendron aralioides HOM05D002276 ORTHO05D002381 3.0e-07 60.1 90 37.8
AT2G38560 Arabidopsis thaliana HOM05D002276 ORTHO05D002381 3.9e-07 59.7 123 30.9
Duzib151G1136 Durio zibethinus HOM05D002276 ORTHO05D002381 5.1e-07 59.3 89 40.4
Nn2g10273 Nelumbo nucifera HOM05D002276 ORTHO05D002381 6.7e-07 58.9 89 39.3
PSO384G2188 Papaver somniferum HOM05D002276 ORTHO05D002381 6.7e-07 58.9 90 36.7
Sp4g15210 Schrenkiella parvula HOM05D007973 ORTHO05D011027 6.7e-07 58.9 100 39.0
Gohir.D09G215100 Gossypium hirsutum HOM05D002276 ORTHO05D002381 8.7e-07 58.5 90 37.8
Gorai.006G235600 Gossypium raimondii HOM05D002276 ORTHO05D002381 8.7e-07 58.5 90 37.8
Aqoxy4G03275 Aquilegia oxysepala HOM05D002276 ORTHO05D002381 1.1e-06 58.2 87 42.5
CARHR133240 Cardamine hirsuta HOM05D002276 ORTHO05D002381 1.1e-06 58.2 93 34.4
COL.COLO4_03929 Corchorus olitorius HOM05D002276 ORTHO05D002381 1.1e-06 58.2 90 41.1
Thhalv10016682m.g Eutrema salsugineum HOM05D002276 ORTHO05D002381 1.5e-06 57.8 90 35.6
Manes.09G123400 Manihot esculenta HOM05D002276 ORTHO05D002381 1.5e-06 57.8 89 39.3
PSO339G3554 Papaver somniferum HOM05D002276 ORTHO05D002381 1.5e-06 57.8 90 35.6
THA.LOC104806195 Tarenaya hassleriana HOM05D002276 ORTHO05D002381 1.5e-06 57.8 89 37.1
Carub.0004s2055 Capsella rubella HOM05D002276 ORTHO05D002381 1.9e-06 57.4 128 29.7
Cpa.g.sc17.139 Carica papaya HOM05D007973 ORTHO05D011027 1.9e-06 57.4 82 40.2
Eucgr.A00774 Eucalyptus grandis HOM05D002276 ORTHO05D002381 1.9e-06 57.4 136 33.1
Gohir.A09G213664 Gossypium hirsutum HOM05D002276 ORTHO05D002381 1.9e-06 57.4 90 36.7
Manes.08G170400 Manihot esculenta HOM05D002276 ORTHO05D002381 1.9e-06 57.4 89 38.2
GSVIVG01030171001 Vitis vinifera HOM05D002276 ORTHO05D002381 1.9e-06 57.4 86 38.4
Cpa.g.sc6.370 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-06 56.6 102 32.4
Gohir.D10G112700 Gossypium hirsutum HOM05D002276 ORTHO05D002381 3.3e-06 56.6 90 41.1
Gorai.011G124500 Gossypium raimondii HOM05D002276 ORTHO05D002381 3.3e-06 56.6 90 41.1
MELO3C020014.2 Cucumis melo HOM05D002276 ORTHO05D002381 4.3e-06 56.2 89 40.4
CsaV3_6G002370 Cucumis sativus L. HOM05D002276 ORTHO05D002381 4.3e-06 56.2 89 40.4
DCAR_020154 Daucus carota HOM05D002276 ORTHO05D002381 4.3e-06 56.2 97 33.0
MBI15_g39393_MAGBIO Magnolia biondii HOM05D002276 ORTHO05D002381 5.6e-06 55.8 115 35.7
Cpa.g.sc86.75 Carica papaya HOM05D002276 ORTHO05D002381 7.4e-06 55.5 89 37.1
ClCG11G005630 Citrullus lanatus HOM05D002276 ORTHO05D002381 7.4e-06 55.5 89 40.4
Gohir.A10G153500 Gossypium hirsutum HOM05D002276 ORTHO05D002381 7.4e-06 55.5 89 40.4
THA.LOC104823349 Tarenaya hassleriana HOM05D002276 ORTHO05D002381 7.4e-06 55.5 90 36.7
BcaB02g09184 Brassica carinata HOM05D002276 ORTHO05D002381 9.6e-06 55.1 89 37.1


User provided reference genes

Program Settings