Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 1.2e-172 609.8 317 100.0
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 8.5e-142 507.3 290 92.8
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 2.8e-132 475.7 321 80.7
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 2.0e-130 469.5 321 80.4
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 4.4e-130 468.4 320 80.6
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 4.4e-130 468.4 320 80.6
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 2.9e-129 465.7 320 80.0
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 4.6e-127 458.4 320 79.7
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 1.1e-125 453.8 315 78.7
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 1.1e-125 453.8 315 78.7
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 1.0e-123 447.2 313 77.6
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 1.0e-123 447.2 313 77.6
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 1.8e-123 446.4 315 79.4
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 6.8e-123 444.5 315 77.8
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 2.0e-122 443.0 333 75.7
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 2.2e-121 439.5 315 76.8
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 1.2e-111 407.1 327 71.6
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 3.0e-110 402.5 320 71.2
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 1.9e-109 399.8 316 70.6
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 4.7e-108 395.2 326 69.6
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 6.2e-108 394.8 317 70.0
BcaC02g11942 Brassica carinata HOM05D004156 ORTHO05D005259 5.8e-106 388.3 240 87.5
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 1.1e-99 367.5 310 68.1
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 1.5e-98 363.6 315 64.4
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 2.1e-95 353.2 313 63.6
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 2.1e-92 343.2 267 72.3
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.1e-92 343.2 321 62.0
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 1.1e-91 340.9 321 61.7
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.1e-91 339.3 321 61.4
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 4.5e-90 335.5 320 60.9
BcaB02g09228 Brassica carinata HOM05D004156 ORTHO05D005259 6.4e-89 331.6 223 83.0
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.1e-88 330.9 315 61.3
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 1.4e-88 330.5 316 60.4
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 1.4e-88 330.5 322 59.6
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 1.9e-88 330.1 321 60.1
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 3.3e-85 319.3 313 58.8
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 7.4e-85 318.2 295 61.4
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 2.8e-84 316.2 307 59.9
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 3.6e-84 315.8 320 58.8
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 6.2e-84 315.1 310 59.0
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 1.8e-83 313.5 324 57.1
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 2.4e-83 313.2 309 59.9
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 2.4e-83 313.2 325 57.2
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 2.4e-83 313.2 311 58.8
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 3.1e-83 312.8 314 58.3
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 4.0e-83 312.4 325 57.8
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 1.2e-82 310.8 325 57.5
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 1.5e-82 310.5 314 58.0
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 4.5e-82 308.9 312 56.7
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 4.5e-82 308.9 325 56.9
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 7.6e-82 308.1 317 56.5
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 9.9e-82 307.8 312 58.0
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 9.9e-82 307.8 318 56.6
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 9.9e-82 307.8 313 57.5
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 1.3e-81 307.4 305 58.0
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 8.4e-81 304.7 318 56.3
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 1.9e-80 303.5 323 54.5
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 2.4e-80 303.1 295 57.6
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.4e-80 303.1 315 55.2
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 4.2e-80 302.4 315 55.2
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 4.2e-80 302.4 315 55.2
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 4.2e-80 302.4 309 57.6
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 7.1e-80 301.6 298 57.7
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 7.1e-80 301.6 318 55.3
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 7.1e-80 301.6 313 55.6
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 7.1e-80 301.6 290 58.6
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 9.3e-80 301.2 325 55.4
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 9.3e-80 301.2 311 57.9
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 9.3e-80 301.2 304 56.6
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 1.2e-79 300.8 311 56.6
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 1.2e-79 300.8 324 57.1
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 1.6e-79 300.4 310 57.1
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 1.6e-79 300.4 309 57.3
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 1.6e-79 300.4 301 55.8
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 1.6e-79 300.4 315 54.3
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.1e-79 300.1 315 54.9
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 2.1e-79 300.1 303 57.1
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 2.7e-79 299.7 316 56.0
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 2.3e-78 296.6 307 55.4
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 2.3e-78 296.6 328 54.3
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 2.3e-78 296.6 312 54.5
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 3.0e-78 296.2 315 57.1
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 5.1e-78 295.4 310 55.2
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 6.7e-78 295.0 313 53.7
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 6.7e-78 295.0 305 55.4
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 8.7e-78 294.7 322 55.0
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 1.1e-77 294.3 294 56.1
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 9.6e-77 291.2 212 77.8
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 1.3e-76 290.8 309 55.0
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 1.6e-76 290.4 315 55.9
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 2.1e-76 290.0 314 53.8
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 2.8e-76 289.7 303 55.8
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 3.7e-76 289.3 310 54.2
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 4.8e-76 288.9 312 54.2
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 6.2e-76 288.5 315 53.0
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 6.2e-76 288.5 318 54.1
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 1.1e-75 287.7 290 57.2
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 1.4e-75 287.3 323 52.0
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 4.0e-75 285.8 350 49.7
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 5.3e-75 285.4 313 54.6
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 1.2e-74 284.3 293 54.3
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 1.5e-74 283.9 295 54.6
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 1.5e-74 283.9 321 52.3
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.6e-74 283.1 260 61.5
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 4.5e-74 282.3 305 51.8
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 4.5e-74 282.3 312 53.5
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 5.8e-74 282.0 310 52.9
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 5.8e-74 282.0 312 52.9
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 1.3e-73 280.8 292 54.5
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 1.1e-72 277.7 290 54.5
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 1.1e-72 277.7 296 53.4
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 2.5e-72 276.6 289 57.4
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 2.5e-72 276.6 287 55.7
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 3.2e-72 276.2 315 52.1
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 3.2e-72 276.2 305 52.8
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.2e-72 276.2 349 49.9
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 5.5e-72 275.4 288 54.2
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 1.6e-71 273.9 341 51.0
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 4.6e-71 272.3 375 46.9
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 1.0e-70 271.2 291 56.7
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 3.0e-70 269.6 315 51.7
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 6.7e-70 268.5 329 50.8
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 1.1e-69 267.7 316 51.3
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 2.5e-69 266.5 308 51.6
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 4.8e-68 262.3 302 51.7
BcaC02g11940 Brassica carinata HOM05D004156 ORTHO05D005259 6.3e-68 261.9 177 81.9
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 6.3e-68 261.9 310 51.6
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 9.0e-67 258.1 309 50.2
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 3.4e-66 256.1 395 43.3
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.1e-64 251.1 376 46.3
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 1.2e-63 247.7 285 51.9
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 8.7e-62 241.5 295 49.2
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 1.9e-61 240.4 300 47.0
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 5.7e-61 238.8 154 81.8
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 1.3e-60 237.7 319 45.5
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 1.6e-60 237.3 301 51.8
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 4.1e-59 232.6 334 45.2
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 8.5e-57 224.9 293 49.1
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 1.5e-53 214.2 307 44.3
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.7e-52 210.7 174 66.1
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 3.7e-52 209.5 247 47.8
CBR_g18768 Chara braunii HOM05D004156 ORTHO05D005259 1.5e-50 204.1 282 44.3
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 2.9e-49 199.9 312 43.3
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 2.9e-49 199.9 301 42.2
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 1.4e-48 197.6 331 44.4
HanXRQChr06g0181331 Helianthus annuus HOM05D004156 ORTHO05D005259 5.9e-42 175.6 166 59.0
BcaC09g49789 Brassica carinata HOM05D004156 ORTHO05D005259 1.6e-39 167.5 139 69.8
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.4e-35 154.5 161 60.2
Cre01.g020950 Chlamydomonas reinhardtii HOM05D004156 ORTHO05D005259 2.4e-35 153.7 302 36.8
Gohir.A08G014600 Gossypium hirsutum HOM05D004156 ORTHO05D005259 5.9e-34 149.1 118 70.3
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 1.0e-25 121.7 323 34.4
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 1.9e-24 117.5 170 43.5
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 2.0e-21 107.5 175 44.0
MCO03G226 Micromonas commoda HOM05D004156 ORTHO05D005259 2.2e-20 104.0 146 46.6
C01p32910 Brassica napus HOM05D004156 ORTHO05D005259 2.8e-20 103.6 86 66.3
BcaNung06017 Brassica carinata HOM05D004156 ORTHO05D005259 3.1e-19 100.1 84 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5043 Anthoceros agrestis HOM05D004156 ORTHO05D005259 1.1e-16 91.7 79 54.4
Os06g0142050 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 3.3e-16 90.1 162 43.8
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 2.9e-12 77.0 105 52.4
Nn8g39426 Nelumbo nucifera HOM05D004156 ORTHO05D005259 4.3e-08 63.2 82 47.6
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 7.3e-08 62.4 43 67.4
Psat0s2088g0120 Pisum sativum HOM05D001944 ORTHO05D002405 4.7e-07 59.7 38 81.6


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