Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p28360 Brassica napus HOM05D001631 ORTHO05D098366 5.0e-76 287.7 150 100.0
BolC4t28066H Brassica oleracea HOM05D001631 ORTHO05D001591 1.7e-52 209.5 139 81.3
BcaB02g09304 Brassica carinata HOM05D001631 ORTHO05D001591 7.3e-43 177.6 118 82.2
C04p10870 Brassica napus HOM05D001631 ORTHO05D001591 4.8e-42 174.9 118 81.4
Thhalv10016877m.g Eutrema salsugineum HOM05D001631 ORTHO05D001591 6.2e-42 174.5 139 69.1
Sp4g19410 Schrenkiella parvula HOM05D001631 ORTHO05D001591 3.8e-39 165.2 118 77.1
A05p08750 Brassica napus HOM05D001631 ORTHO05D001591 1.4e-38 163.3 118 78.0
BraA05t19843Z Brassica rapa HOM05D001631 ORTHO05D001591 1.4e-38 163.3 118 78.0
BcaC02g11835 Brassica carinata HOM05D001631 ORTHO05D001591 3.5e-37 158.7 118 75.4
BolC4t22679H Brassica oleracea HOM05D001631 ORTHO05D001591 3.5e-37 158.7 118 75.4
CARHR131600 Cardamine hirsuta HOM05D001631 ORTHO05D001591 1.1e-35 153.7 121 68.6
Carub.0004s1885 Capsella rubella HOM05D001631 ORTHO05D001591 7.4e-35 151.0 122 68.9
Carub.0004s1898 Capsella rubella HOM05D001631 ORTHO05D001591 7.4e-35 151.0 122 68.9
AL4G33440 Arabidopsis lyrata HOM05D001631 ORTHO05D001591 1.6e-26 123.2 121 59.5
AT2G37090 Arabidopsis thaliana HOM05D001631 ORTHO05D001591 3.7e-26 122.1 121 58.7
THA.LOC104806494 Tarenaya hassleriana HOM05D001631 ORTHO05D001591 7.6e-24 114.4 122 55.7
Aa31LG5G22330 Aethionema arabicum HOM05D001631 ORTHO05D001591 8.7e-20 100.9 120 55.0
Haze_20635 Corylus avellana HOM05D001631 ORTHO05D001591 3.4e-16 89.0 118 45.8
Thecc.05G054900 Theobroma cacao HOM05D001631 ORTHO05D001591 5.9e-16 88.2 122 45.9
Sabra06G0102900 Salix brachista HOM05D001631 ORTHO05D001591 1.0e-15 87.4 147 42.2
Duzib093G1288 Durio zibethinus HOM05D001631 ORTHO05D001591 1.3e-15 87.0 122 42.6
Potri.016G086400 Populus trichocarpa HOM05D001631 ORTHO05D001591 1.3e-15 87.0 147 40.1
QL07p045192 Quercus lobata HOM05D001631 ORTHO05D001591 2.2e-15 86.3 142 40.8
Potri.006G131000 Populus trichocarpa HOM05D001631 ORTHO05D001591 5.0e-15 85.1 144 41.0
Manes.08G003900 Manihot esculenta HOM05D001631 ORTHO05D001591 8.5e-15 84.3 144 40.3
Manes.09G080547 Manihot esculenta HOM05D001631 ORTHO05D001591 8.5e-15 84.3 150 42.7
Dinv35715 Davidia involucrata HOM05D001631 ORTHO05D001591 1.9e-14 83.2 120 43.3
Duzib128G0089 Durio zibethinus HOM05D001631 ORTHO05D001591 3.2e-14 82.4 143 38.5
CiPaw.09G179500 Carya illinoinensis HOM05D001631 ORTHO05D001591 5.5e-14 81.6 124 43.5
Gohir.A09G151700 Gossypium hirsutum HOM05D001631 ORTHO05D001591 7.2e-14 81.3 124 45.2
Phvul.001G175200 Phaseolus vulgaris HOM05D001631 ORTHO05D001591 3.6e-13 79.0 123 43.9
Lj2A108G34 Lonicera japonica HOM05D001631 ORTHO05D001591 6.1e-13 78.2 123 43.9
VMungo1383G1466 Vigna mungo HOM05D001631 ORTHO05D001591 1.0e-12 77.4 118 44.1
Dinv37261 Davidia involucrata HOM05D001631 ORTHO05D001591 1.4e-12 77.0 120 41.7
Migut.J00420 Erythranthe guttata HOM05D001631 ORTHO05D001591 1.4e-12 77.0 120 43.3
MD04G1103300 Malus domestica HOM05D001631 ORTHO05D001591 1.4e-12 77.0 129 37.2
FAN05G0747 Fragaria x ananassa HOM05D001631 ORTHO05D001591 1.8e-12 76.6 127 41.7
MD12G1123400 Malus domestica HOM05D001631 ORTHO05D001591 1.8e-12 76.6 130 36.9
TPR.G36975 Trifolium pratense HOM05D001631 ORTHO05D001591 1.8e-12 76.6 119 44.5
Cc06_g03600 Coffea canephora HOM05D001631 ORTHO05D001591 3.0e-12 75.9 126 42.9
Glyma.03G178300 Glycine max HOM05D001631 ORTHO05D001591 5.1e-12 75.1 119 41.2
Oeu016501.1 Olea europaea HOM05D001631 ORTHO05D001591 5.1e-12 75.1 118 43.2
Glyma.19G179100 Glycine max HOM05D001631 ORTHO05D001591 1.1e-11 73.9 118 39.0
Nn2g13011 Nelumbo nucifera HOM05D001631 ORTHO05D001591 1.1e-11 73.9 119 42.0
Gohir.D09G147400 Gossypium hirsutum HOM05D001631 ORTHO05D001591 1.9e-11 73.2 123 42.3
COL.COLO4_27071 Corchorus olitorius HOM05D001631 ORTHO05D001591 2.5e-11 72.8 63 54.0
Gorai.006G168500 Gossypium raimondii HOM05D001631 ORTHO05D001591 2.5e-11 72.8 125 40.8
vmacro20052 Vaccinium macrocarpon HOM05D001631 ORTHO05D001591 2.5e-11 72.8 118 39.8
PSO063G4101 Papaver somniferum HOM05D001631 ORTHO05D001591 3.3e-11 72.4 125 34.4
arahy.Tifrunner.gnm1.ann1.B10GYL Arachis hypogaea HOM05D001631 ORTHO05D001591 5.7e-11 71.6 140 35.0
Eucgr.A01172 Eucalyptus grandis HOM05D001631 ORTHO05D001591 5.7e-11 71.6 133 41.4
Prupe.6G239800 Prunus persica HOM05D001631 ORTHO05D001591 5.7e-11 71.6 156 35.9
EL10Ac7g16505 Beta vulgaris HOM05D001631 ORTHO05D001591 7.4e-11 71.2 124 37.9
Lalb_Chr01g0018991 Lupinus albus HOM05D001631 ORTHO05D001591 7.4e-11 71.2 118 43.2
PSO339G6705 Papaver somniferum HOM05D001631 ORTHO05D001591 7.4e-11 71.2 125 34.4
PGR142G0054 Punica granatum HOM05D001631 ORTHO05D001591 7.4e-11 71.2 124 37.9
arahy.Tifrunner.gnm1.ann1.FDEL0C Arachis hypogaea HOM05D001631 ORTHO05D001591 9.7e-11 70.9 141 34.0
Nitab4.5_0000669g0220 Nicotiana tabacum HOM05D001631 ORTHO05D001591 9.7e-11 70.9 66 57.6
CANSAT80G1904 Cannabis sativa HOM05D001631 ORTHO05D001591 1.3e-10 70.5 117 35.0
Cpa.g.sc286.11 Carica papaya HOM05D001631 ORTHO05D001591 1.3e-10 70.5 119 37.8
Sabra16G0092700 Salix brachista HOM05D001631 ORTHO05D001591 1.3e-10 70.5 113 42.5
Glyma.10G050100 Glycine max HOM05D001631 ORTHO05D001591 1.7e-10 70.1 130 36.2
Hma1.2p1_0111F.1_g053940 Hydrangea macrophylla HOM05D001631 ORTHO05D001591 1.7e-10 70.1 132 36.4
Hund28549 Selenicereus undatus HOM05D001631 ORTHO05D001591 1.7e-10 70.1 124 37.1
Hund28550 Selenicereus undatus HOM05D001631 ORTHO05D001591 1.7e-10 70.1 124 37.1
Aqoxy4G03216 Aquilegia oxysepala HOM05D001631 ORTHO05D001591 2.2e-10 69.7 120 39.2
FvH4_6g15450 Fragaria vesca HOM05D001631 ORTHO05D001591 2.2e-10 69.7 127 38.6
PGSC0003DMG400001769 Solanum tuberosum HOM05D001631 ORTHO05D001591 2.2e-10 69.7 80 52.5
FAN14G4416 Fragaria x ananassa HOM05D000156 ORTHO05D001430 2.8e-10 69.3 127 38.6
GSVIVG01025636001 Vitis vinifera HOM05D001631 ORTHO05D001591 2.8e-10 69.3 42 76.2
Peaxi162Scf00005g04210 Petunia axillaris HOM05D001631 ORTHO05D001591 3.7e-10 68.9 81 46.9
Psat3g044360 Pisum sativum HOM05D001631 ORTHO05D001591 3.7e-10 68.9 123 40.7
TAR623G0354 Trochodendron aralioides HOM05D001631 ORTHO05D001591 3.7e-10 68.9 119 37.0
CSS0009292 Camellia sinensis var. sinensis HOM05D001631 ORTHO05D001591 4.8e-10 68.6 118 38.1
CAN.G1676.7 Capsicum annuum HOM05D001631 ORTHO05D001591 4.8e-10 68.6 75 50.7
AUR62041779 Chenopodium quinoa HOM05D001631 ORTHO05D001591 6.3e-10 68.2 124 39.5
MSTRG.26724 Avicennia marina HOM05D001631 ORTHO05D001591 8.2e-10 67.8 122 40.2
TAR369G1044 Trochodendron aralioides HOM05D001631 ORTHO05D001591 1.4e-09 67.0 147 34.0
AUR62040038 Chenopodium quinoa HOM05D001631 ORTHO05D001591 1.8e-09 66.6 128 35.9
Solyc09g007420.4 Solanum lycopersicum HOM05D001631 ORTHO05D001591 1.8e-09 66.6 84 46.4
Ah.15g092150 Amaranthus hybridus HOM05D001631 ORTHO05D001591 3.1e-09 65.9 126 34.1
Ciclev10012036m.g Citrus clementina HOM05D001631 ORTHO05D001591 4.1e-09 65.5 75 45.3
FAN02G0016 Fragaria x ananassa HOM05D000156 ORTHO05D001430 4.1e-09 65.5 129 34.9
Nitab4.5_0007806g0020 Nicotiana tabacum HOM05D001631 ORTHO05D001591 4.1e-09 65.5 115 41.7
Glyma.13G137600 Glycine max HOM05D001631 ORTHO05D001591 5.3e-09 65.1 118 42.4
Lsat_1_v5_gn_1_53961 Lactuca sativa HOM05D001631 ORTHO05D001591 6.9e-09 64.7 132 36.4
Ah.08g211900 Amaranthus hybridus HOM05D001631 ORTHO05D001591 9.1e-09 64.3 123 35.8
HanXRQChr01g0027461 Helianthus annuus HOM05D001631 ORTHO05D001591 1.2e-08 63.9 130 36.9
Nn2g10685 Nelumbo nucifera HOM05D001631 ORTHO05D001591 1.5e-08 63.5 143 33.6
CSS0005895 Camellia sinensis var. sinensis HOM05D001631 ORTHO05D001591 2.0e-08 63.2 153 35.3
Migut.L01662 Erythranthe guttata HOM05D001631 ORTHO05D001591 2.0e-08 63.2 78 44.9
RhsimUnG0115900 Rhododendron simsii HOM05D001631 ORTHO05D001591 2.0e-08 63.2 121 38.0
ECA248G3702 Erigeron canadensis HOM05D001631 ORTHO05D001591 2.6e-08 62.8 131 35.1
Lj1g0000395 Lotus japonicus HOM05D001631 ORTHO05D001591 2.6e-08 62.8 118 37.3
DCAR_009285 Daucus carota HOM05D001631 ORTHO05D001591 3.4e-08 62.4 118 38.1
RcHm_v2.0_Chr3g0468931 Rosa chinensis HOM05D001631 ORTHO05D001591 4.5e-08 62.0 129 34.1
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 5.9e-08 61.6 125 40.0
DCAR_014967 Daucus carota HOM05D001631 ORTHO05D001591 7.7e-08 61.2 117 36.8
Atru.chr8.2565 Acer truncatum HOM05D001631 ORTHO05D001591 1.0e-07 60.8 99 38.4
TWI77G0410 Tripterygium wilfordii HOM05D001631 ORTHO05D001591 1.3e-07 60.5 89 43.8
Sed0018508 Sechium edule HOM05D001631 ORTHO05D001591 2.9e-07 59.3 49 59.2
Sc02g0001950 Simmondsia chinensis HOM05D001631 ORTHO05D001591 2.9e-07 59.3 127 34.6
SalBow4G1579 Salvia bowleyana HOM05D001631 ORTHO05D001591 3.8e-07 58.9 39 61.5
SalBow4G2324 Salvia bowleyana HOM05D001631 ORTHO05D001591 3.8e-07 58.9 39 61.5
CsaV3_3G035620 Cucumis sativus L. HOM05D001631 ORTHO05D001591 5.0e-07 58.5 118 35.6
CSS0022980 Camellia sinensis var. sinensis HOM05D001631 ORTHO05D001591 6.5e-07 58.2 131 35.9
MELO3C009322.2 Cucumis melo HOM05D001631 ORTHO05D001591 8.5e-07 57.8 54 53.7
HPP92_001040 Vanilla planifolia HOM05D001631 ORTHO05D001591 8.5e-07 57.8 42 61.9
PGR004G0751 Punica granatum HOM05D001631 ORTHO05D001591 1.9e-06 56.6 136 35.3
SalBow3G0546 Salvia bowleyana HOM05D001631 ORTHO05D000003 1.9e-06 56.6 118 37.3
Actinidia19709 Actinidia chinensis HOM05D000156 ORTHO05D001430 2.5e-06 56.2 124 37.1
Phvul.007G164400 Phaseolus vulgaris HOM05D001631 ORTHO05D001591 2.5e-06 56.2 146 34.9
SalBow3G0591 Salvia bowleyana HOM05D001631 ORTHO05D001591 2.5e-06 56.2 118 37.3
MBI05_g31761_MAGBIO Magnolia biondii HOM05D001631 ORTHO05D001591 3.2e-06 55.8 123 34.1
unitig_22.g5084 Utricularia gibba HOM05D001631 ORTHO05D001591 4.2e-06 55.5 118 33.1


User provided reference genes

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