Gene: COL.COLO4_27071

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27071
  • Transcript Identifier COL.rna25798
  • Gene Type Coding gene
  • Location AWUE01019427.1 : 46370-48526 : positive

Gene Family Information

  • ID HOM05D001631
  • #Genes/#Species 395/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25798
  • GenBank OMO73487.1
  • id gene27043
  • gene_name COLO4_27071
  • uniprot A0A1R3HSX4

Descriptions

  • Description Glycosyl transferase, family 43
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071555
IEA
GOA Databasecell wall organization
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process Os05g0123100
GO:0010417
ISO
PLAZA Integrative Orthologyglucuronoxylan biosynthetic process AT2G37090
GO:0010413
ISO
PLAZA Integrative Orthologyglucuronoxylan metabolic process AT2G37090
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT2G37090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0015018
IEA
GOA Databasegalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015018
IEA
InterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0042285
ISO
PLAZA Integrative Orthologyxylosyltransferase activity AT2G37090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029044 Nucleotide-diphospho-sugar transferases
IPR005027 Glycosyl transferase, family 43
Mapman id Description
21.2.2.1.3.1 Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX9)