Gene: AT2G37090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G37090
  • Transcript Identifier AT2G37090.1
  • Gene Type Coding gene
  • Location Chr2 : 15587671-15589223 : negative

Gene Family Information

  • ID HOM05D001631
  • #Genes/#Species 395/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G37090.1
  • symbol IRX9
  • full_name IRREGULAR XYLEM 9
  • uniprot Q9ZQC6

Descriptions

  • Description Nucleotide-diphospho-sugar transferases superfamily protein
  • Computational description IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 43 (InterPro:IPR005027); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits to 584 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009834
IMP
IBA
Gene Ontologyplant-type secondary cell wall biogenesis1 2
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process Os05g0123100
GO:0071555
IEA
GOA Databasecell wall organization
GO:0010417
IGI
IBA
Gene Ontologyglucuronoxylan biosynthetic process2 3
GO:0005975
IBA
Gene Ontologycarbohydrate metabolic process2
GO:0010413
IMP
Gene Ontologyglucuronoxylan metabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015018
IEA
Gene Ontologygalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015018
IEA
InterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016757
ISS
Gene Ontologyglycosyltransferase activity
GO:0042285
IMP
IBA
Gene Ontologyxylosyltransferase activity2 5
GO:0047517
IEA
Gene Ontology1,4-beta-D-xylan synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
ISM
Gene OntologyGolgi apparatus4
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000139
IBA
Gene OntologyGolgi membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029044 Nucleotide-diphospho-sugar transferases
IPR005027 Glycosyl transferase, family 43
Mapman id Description
21.2.2.1.3.1 Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX9)