Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p54460 Brassica napus HOM05D002718 ORTHO05D003269 2.4e-41 171.8 90 100.0
A08p23110 Brassica napus HOM05D002718 ORTHO05D003269 2.4e-41 171.8 90 100.0
A09p58030 Brassica napus HOM05D002718 ORTHO05D003269 1.6e-40 169.1 90 98.9
BraA03t14512Z Brassica rapa HOM05D002718 ORTHO05D003269 3.5e-40 167.9 88 100.0
BcaC09g50300 Brassica carinata HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
BcaNung00226 Brassica carinata HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
A01p21500 Brassica napus HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
C01p26840 Brassica napus HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
BolC1t02628H Brassica oleracea HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
BraA01t02056Z Brassica rapa HOM05D002718 ORTHO05D003269 7.8e-40 166.8 88 98.9
BolC5t31465H Brassica oleracea HOM05D002718 ORTHO05D003269 1.3e-39 166.0 90 96.7
Carub.0007s2548 Capsella rubella HOM05D002718 ORTHO05D003269 1.7e-39 165.6 88 97.7
AL7G39040 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 2.3e-39 165.2 88 97.7
AT4G16130 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 2.3e-39 165.2 88 97.7
Sp7g14590 Schrenkiella parvula HOM05D002718 ORTHO05D003269 3.9e-39 164.5 88 97.7
Thhalv10024313m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 1.1e-38 162.9 88 96.6
CARHR222420 Cardamine hirsuta HOM05D002718 ORTHO05D003269 2.5e-38 161.8 88 95.5
Aa31LG10G6050 Aethionema arabicum HOM05D002718 ORTHO05D003269 9.5e-38 159.8 88 95.5
THA.LOC104802597 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 1.2e-37 159.5 88 95.5
THA.LOC104820278 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 6.8e-36 153.7 88 92.0
QL12p025880 Quercus lobata HOM05D002718 ORTHO05D003269 2.0e-35 152.1 88 90.9
DCAR_000671 Daucus carota HOM05D002718 ORTHO05D003269 3.4e-35 151.4 88 89.8
FvH4_2g36460 Fragaria vesca HOM05D002718 ORTHO05D003269 3.4e-35 151.4 88 92.0
FAN15G0923 Fragaria x ananassa HOM05D002718 ORTHO05D003269 3.4e-35 151.4 88 92.0
FAN20G1933 Fragaria x ananassa HOM05D002718 ORTHO05D003269 3.4e-35 151.4 88 92.0
FAN27G0986 Fragaria x ananassa HOM05D002718 ORTHO05D003269 3.4e-35 151.4 88 92.0
RcHm_v2.0_Chr6g0305421 Rosa chinensis HOM05D002718 ORTHO05D003269 4.4e-35 151.0 88 90.9
CiPaw.08G021400 Carya illinoinensis HOM05D002718 ORTHO05D003269 7.5e-35 150.2 88 89.8
Dinv38809 Davidia involucrata HOM05D002718 ORTHO05D003269 7.5e-35 150.2 88 89.8
Peaxi162Scf00213g00943 Petunia axillaris HOM05D002718 ORTHO05D003269 7.5e-35 150.2 88 90.9
Haze_21795 Corylus avellana HOM05D002718 ORTHO05D003269 9.8e-35 149.8 89 89.9
Prupe.1G456000 Prunus persica HOM05D002718 ORTHO05D003269 9.8e-35 149.8 88 90.9
Sabra18G0016400 Salix brachista HOM05D002718 ORTHO05D003269 9.8e-35 149.8 90 88.9
Solyc08g069231.1 Solanum lycopersicum HOM05D002718 ORTHO05D003269 9.8e-35 149.8 88 89.8
Sopen08g022860 Solanum pennellii HOM05D002718 ORTHO05D003269 9.8e-35 149.8 88 89.8
GSVIVG01035565001 Vitis vinifera HOM05D002718 ORTHO05D003269 9.8e-35 149.8 88 88.6
CAN.G480.17 Capsicum annuum HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 88.6
AUR62038736 Chenopodium quinoa HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 89.8
CsaV3_4G009070 Cucumis sativus L. HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 90.9
Eucgr.C02132 Eucalyptus grandis HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 88.6
MD08G1124400 Malus domestica HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 90.9
Sed0009215 Sechium edule HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 90.9
Sc06g0001240 Simmondsia chinensis HOM05D002718 ORTHO05D003269 1.3e-34 149.4 88 89.8
MELO3C018969.2 Cucumis melo HOM05D002718 ORTHO05D003269 1.7e-34 149.1 88 90.9
PGR084G0004 Punica granatum HOM05D002718 ORTHO05D003269 1.7e-34 149.1 88 90.9
PGR142G1783 Punica granatum HOM05D002718 ORTHO05D003269 1.7e-34 149.1 88 90.9
TAR383G0086 Trochodendron aralioides HOM05D002718 ORTHO05D003269 1.7e-34 149.1 88 88.6
EL10Ac2g03697 Beta vulgaris HOM05D002718 ORTHO05D003269 2.2e-34 148.7 88 88.6
Ciclev10007339m.g Citrus clementina HOM05D002718 ORTHO05D003269 2.2e-34 148.7 88 89.8
DCAR_004565 Daucus carota HOM05D002718 ORTHO05D003269 2.2e-34 148.7 88 87.5
CANSAT25G2302 Cannabis sativa HOM05D002718 ORTHO05D003269 2.9e-34 148.3 88 87.5
MBI16_g37213_MAGBIO Magnolia biondii HOM05D002718 ORTHO05D003269 2.9e-34 148.3 88 88.6
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 3.7e-34 147.9 88 88.6
ATR0626G149 Amborella trichopoda HOM05D002718 ORTHO05D003269 3.7e-34 147.9 88 88.6
Cpa.g.sc148.1 Carica papaya HOM05D002718 ORTHO05D003269 3.7e-34 147.9 88 87.5
Cfa013311 Carpinus fangiana HOM05D002718 ORTHO05D003269 3.7e-34 147.9 88 89.8
MSTRG.25768 Avicennia marina HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 87.5
Manes.16G137600 Manihot esculenta HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Potri.018G003100 Populus trichocarpa HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0002900 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0006300 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0006600 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0008300 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0008500 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
Sabra18G0009800 Salix brachista HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
SalBow4G0158 Salvia bowleyana HOM05D002718 ORTHO05D003269 4.9e-34 147.5 88 88.6
ECA246G1707 Erigeron canadensis HOM05D002718 ORTHO05D003269 6.4e-34 147.1 88 86.4
Nn8g41097 Nelumbo nucifera HOM05D002718 ORTHO05D003269 6.4e-34 147.1 88 87.5
Nitab4.5_0000970g0150 Nicotiana tabacum HOM05D002718 ORTHO05D003269 6.4e-34 147.1 88 88.6
Oeu028830.2 Olea europaea HOM05D002718 ORTHO05D003269 6.4e-34 147.1 88 87.5
PSO170G4524 Papaver somniferum HOM05D002718 ORTHO05D003269 6.4e-34 147.1 88 87.5
CiPaw.07G209700 Carya illinoinensis HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 88.6
ClCG05G026320 Citrullus lanatus HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 89.8
Cc11_g03230 Coffea canephora HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 87.5
Lj5g0024079 Lotus japonicus HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 88.6
Nitab4.5_0001942g0140 Nicotiana tabacum HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 88.6
Rhsim04G0184400 Rhododendron simsii HOM05D002718 ORTHO05D003269 8.3e-34 146.7 88 86.4
Glyma.17G194400 Glycine max HOM05D002718 ORTHO05D003269 1.1e-33 146.4 88 87.5
Lsat_1_v5_gn_3_26460 Lactuca sativa HOM05D002718 ORTHO05D003269 1.1e-33 146.4 88 85.2
Lj7C753T13 Lonicera japonica HOM05D002718 ORTHO05D003269 1.1e-33 146.4 88 87.5
TWI32G0829 Tripterygium wilfordii HOM05D002718 ORTHO05D003269 1.1e-33 146.4 88 87.5
Glyma.14G138300 Glycine max HOM05D002718 ORTHO05D003269 1.4e-33 146.0 88 86.4
MD15G1103100 Malus domestica HOM05D002718 ORTHO05D003269 1.4e-33 146.0 88 88.6
Medtr1g009190 Medicago truncatula HOM05D002718 ORTHO05D003269 1.4e-33 146.0 88 87.5
HanXRQChr17g0539291 Helianthus annuus HOM05D002718 ORTHO05D003269 1.9e-33 145.6 88 85.2
Hma1.2p1_0331F.1_g127520 Hydrangea macrophylla HOM05D002718 ORTHO05D003269 1.9e-33 145.6 86 89.5
Lalb_Chr22g0361171 Lupinus albus HOM05D002718 ORTHO05D003269 1.9e-33 145.6 88 87.5
Ca_12844_v3 Cicer arietinum L. HOM05D002718 ORTHO05D003269 2.4e-33 145.2 88 87.5
CANSAT35G0611 Cannabis sativa HOM05D002718 ORTHO05D003269 3.2e-33 144.8 88 85.2
TPR.G12004 Trifolium pratense HOM05D002718 ORTHO05D003269 3.2e-33 144.8 88 87.5
Zm00001eb208110 Zea mays HOM05D002718 ORTHO05D003269 4.1e-33 144.4 88 86.4
Actinidia25741 Actinidia chinensis HOM05D002718 ORTHO05D003269 5.4e-33 144.1 88 85.2
SGA_v2.0_scaffold27G11655 Striga asiatica HOM05D002718 ORTHO05D003269 5.4e-33 144.1 88 87.5
Cc00_g00350 Coffea canephora HOM05D002718 ORTHO05D003269 7.0e-33 143.7 86 89.5
Haze_19055 Corylus avellana HOM05D002718 ORTHO05D003269 7.0e-33 143.7 89 85.4
Hund03264 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.0e-33 143.7 95 84.2
HPP92_010414 Vanilla planifolia HOM05D002718 ORTHO05D003269 7.0e-33 143.7 88 85.2
arahy.Tifrunner.gnm1.ann1.YWBJ1A Arachis hypogaea HOM05D002718 ORTHO05D003269 9.2e-33 143.3 88 86.4
CSS0012006 Camellia sinensis var. sinensis HOM05D002718 ORTHO05D003269 9.2e-33 143.3 88 85.2
ClCG10G008570 Citrullus lanatus HOM05D002718 ORTHO05D003269 9.2e-33 143.3 93 86.0
Nitab4.5_0000899g0120 Nicotiana tabacum HOM05D002718 ORTHO05D003269 9.2e-33 143.3 88 83.0
Os02g0141300 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 9.2e-33 143.3 88 84.1
Oeu059291.2 Olea europaea HOM05D002718 ORTHO05D003269 1.2e-32 142.9 88 85.2
Gohir.A06G107500 Gossypium hirsutum HOM05D002718 ORTHO05D003269 2.1e-32 142.1 88 85.2
Manes.03G001300 Manihot esculenta HOM05D002718 ORTHO05D003269 2.1e-32 142.1 88 85.2
Nitab4.5_0001535g0050 Nicotiana tabacum HOM05D002718 ORTHO05D003269 2.1e-32 142.1 88 84.1
VMungo0647G1266 Vigna mungo HOM05D002718 ORTHO05D003269 2.1e-32 142.1 88 86.4
Gohir.D06G109800 Gossypium hirsutum HOM05D002718 ORTHO05D003269 2.7e-32 141.7 88 84.1
Gorai.010G124600 Gossypium raimondii HOM05D002718 ORTHO05D003269 2.7e-32 141.7 88 84.1
Peaxi162Scf00320g00216 Petunia axillaris HOM05D002718 ORTHO05D003269 2.7e-32 141.7 88 83.0
Aqoxy4G00376 Aquilegia oxysepala HOM05D002718 ORTHO05D003269 3.5e-32 141.4 88 85.2
BcaC05g26867 Brassica carinata HOM05D002718 ORTHO05D003269 3.5e-32 141.4 78 94.9
Lj3C988G10 Lonicera japonica HOM05D002718 ORTHO05D003269 3.5e-32 141.4 88 83.0
MSTRG.11818 Avicennia marina HOM05D002718 ORTHO05D003269 4.6e-32 141.0 88 84.1
Phvul.001G077700 Phaseolus vulgaris HOM05D002718 ORTHO05D003269 4.6e-32 141.0 88 84.1
SEGI_20112 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 6.0e-32 140.6 88 84.1
arahy.Tifrunner.gnm1.ann1.NA6C8E Arachis hypogaea HOM05D002718 ORTHO05D003269 7.8e-32 140.2 88 84.1
MELO3C003601.2 Cucumis melo HOM05D002718 ORTHO05D003269 7.8e-32 140.2 88 86.4
vmacro08496 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 7.8e-32 140.2 89 85.4
vmacro23159 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 7.8e-32 140.2 89 85.4
CsaV3_3G047280 Cucumis sativus L. HOM05D002718 ORTHO05D003269 1.0e-31 139.8 88 86.4
Lsat_1_v5_gn_5_56521 Lactuca sativa HOM05D002718 ORTHO05D003269 1.0e-31 139.8 88 81.8
Thecc.09G002800 Theobroma cacao HOM05D002718 ORTHO05D003269 1.3e-31 139.4 88 83.0
COL.COLO4_18626 Corchorus olitorius HOM05D002718 ORTHO05D003269 1.7e-31 139.0 88 81.8
unitig_32.g11648 Utricularia gibba HOM05D002718 ORTHO05D003269 2.3e-31 138.7 88 83.0
QL11p009227 Quercus lobata HOM05D002718 ORTHO05D003269 3.0e-31 138.3 88 78.4
QL11p011549 Quercus lobata HOM05D002718 ORTHO05D003269 3.0e-31 138.3 88 78.4
HPP92_017382 Vanilla planifolia HOM05D002718 ORTHO05D003269 3.0e-31 138.3 88 84.1
Duzib168G0110 Durio zibethinus HOM05D002718 ORTHO05D003269 3.9e-31 137.9 88 81.8
Nn5g27632 Nelumbo nucifera HOM05D002718 ORTHO05D003269 3.9e-31 137.9 88 81.8
Potri.018G138204 Populus trichocarpa HOM05D002718 ORTHO05D003269 3.9e-31 137.9 88 81.8
Potri.018G145700 Populus trichocarpa HOM05D002718 ORTHO05D003269 3.9e-31 137.9 88 81.8
Sabra18G0120000 Salix brachista HOM05D002718 ORTHO05D003269 5.1e-31 137.5 88 81.8
Sabra18G0127600 Salix brachista HOM05D002718 ORTHO05D003269 5.1e-31 137.5 88 81.8
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 5.1e-31 137.5 88 80.7
Lalb_Chr08g0243461 Lupinus albus HOM05D002718 ORTHO05D003269 6.6e-31 137.1 87 81.6
Zm00001eb315700 Zea mays HOM05D002718 ORTHO05D003269 1.1e-30 136.3 90 81.1
Solyc07g016170.4 Solanum lycopersicum HOM05D002718 ORTHO05D003269 1.5e-30 136.0 87 81.6
MSTRG.10465 Avicennia marina HOM05D002718 ORTHO05D003269 3.3e-30 134.8 88 77.3
PSO675G7617 Papaver somniferum HOM05D002718 ORTHO05D003269 4.3e-30 134.4 88 80.7
Zm00001eb347750 Zea mays HOM05D002718 ORTHO05D003269 7.3e-30 133.7 90 80.0
GSVIVG01032250001 Vitis vinifera HOM05D002718 ORTHO05D003269 9.5e-30 133.3 88 80.7
CAN.G600.6 Capsicum annuum HOM05D002718 ORTHO05D003269 1.6e-29 132.5 88 77.3
PSO675G2426 Papaver somniferum HOM05D002718 ORTHO05D003269 2.1e-29 132.1 88 79.5
SHI02366 Sapria himalayana HOM05D002718 ORTHO05D003269 2.8e-29 131.7 104 72.1
AL5G21150 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 3.6e-29 131.3 87 80.5
HanXRQChr12g0384051 Helianthus annuus HOM05D002718 ORTHO05D003269 3.6e-29 131.3 88 79.5
Hund19395 Selenicereus undatus HOM05D002718 ORTHO05D003269 3.6e-29 131.3 88 76.1
SalBow5G2825 Salvia bowleyana HOM05D002718 ORTHO05D003269 6.2e-29 130.6 88 77.3
Actinidia03340 Actinidia chinensis HOM05D002718 ORTHO05D003269 8.1e-29 130.2 85 81.2
THA.LOC104810997 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 1.4e-28 129.4 87 80.5
Carub.0005s0889 Capsella rubella HOM05D002718 ORTHO05D003269 1.8e-28 129.0 87 79.3
AT3G42850 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 3.1e-28 128.3 87 78.2
Migut.A00453 Erythranthe guttata HOM05D002718 ORTHO05D003269 5.2e-28 127.5 80 83.8
Sp6g17930 Schrenkiella parvula HOM05D002718 ORTHO05D003269 1.5e-27 125.9 87 78.2
BcaB08g35974 Brassica carinata HOM05D002718 ORTHO05D003269 2.6e-27 125.2 88 76.1
BcaC04g20159 Brassica carinata HOM05D002718 ORTHO05D003269 2.6e-27 125.2 88 76.1
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 2.6e-27 125.2 88 76.1
BolC9t57573H Brassica oleracea HOM05D002718 ORTHO05D003269 2.6e-27 125.2 88 76.1
Cpa.g.sc115.31 Carica papaya HOM05D002718 ORTHO05D003269 2.6e-27 125.2 82 80.5
Thhalv10012582m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 2.6e-27 125.2 87 77.0
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 7.5e-27 123.6 88 75.0
BraA10t43426Z Brassica rapa HOM05D002718 ORTHO05D003269 7.5e-27 123.6 88 75.0
Zm00001eb227090 Zea mays HOM05D002718 ORTHO05D003269 9.9e-27 123.2 88 67.0
Mapoly0043s0024 Marchantia polymorpha HOM05D002718 ORTHO05D003269 1.3e-26 122.9 87 72.4
SMO146G0086 Selaginella moellendorffii HOM05D002718 ORTHO05D003269 1.7e-26 122.5 87 71.3
Os06g0702500 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 1.0e-23 113.2 81 72.8
Psat6g034400 Pisum sativum HOM05D002718 ORTHO05D003269 1.3e-23 112.8 69 87.0
A02p20940 Brassica napus HOM05D002718 ORTHO05D003269 2.3e-23 112.1 90 71.1
Pp3c6_8620 Physcomitrium patens HOM05D002718 ORTHO05D003269 8.6e-23 110.2 87 63.2
AagrBONN_evm.TU.Sc2ySwM_117.407 Anthoceros agrestis HOM05D002718 ORTHO05D003269 1.5e-22 109.4 87 65.5
A04p21730 Brassica napus HOM05D002718 ORTHO05D003269 3.3e-22 108.2 90 68.9
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 2.1e-21 105.5 88 69.3
Pp3c16_4920 Physcomitrium patens HOM05D002718 ORTHO05D003269 2.1e-21 105.5 87 64.4
Sopen07g005900 Solanum pennellii HOM05D002718 ORTHO05D003269 4.4e-19 97.8 68 76.5
AUR62020642 Chenopodium quinoa HOM05D002718 ORTHO05D003269 4.9e-18 94.4 88 63.6
CBR_g29486 Chara braunii HOM05D002718 ORTHO05D003269 1.1e-17 93.2 79 62.0
Sabra18G0008800 Salix brachista HOM05D003482 ORTHO05D004194 3.5e-16 88.2 54 83.3
Sabra18G0002400 Salix brachista HOM05D002718 ORTHO05D003269 5.1e-15 84.3 53 81.1
SEGI_12182 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 6.6e-15 84.0 58 75.9
Haze_18803 Corylus avellana HOM05D002718 ORTHO05D003269 1.5e-14 82.8 61 70.5
PRCOL_00002758 Prasinoderma coloniale HOM05D002718 ORTHO05D003269 2.4e-12 75.5 82 48.8
BcaB04g18358 Brassica carinata HOM05D002718 ORTHO05D003269 9.9e-11 70.1 41 87.8
Hma1.2p1_0307F.1_g119990 Hydrangea macrophylla HOM05D002718 ORTHO05D003269 3.2e-09 65.1 43 79.1
Lsat_1_v5_gn_6_79020 Lactuca sativa HOM05D000331 ORTHO05D016639 1.6e-08 62.8 67 50.7
Lsat_1_v5_gn_5_45060 Lactuca sativa HOM05D002718 ORTHO05D003269 2.3e-07 58.9 64 50.0
SEGI_40544 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 6.6e-07 57.4 44 65.9
CDE04G1758 Ceratophyllum demersum HOM05D002718 ORTHO05D003269 1.5e-06 56.2 69 59.4


User provided reference genes

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