Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p46670 Brassica napus HOM05D005362 ORTHO05D006895 1.2e-74 283.1 144 100.0
BcaC06g33209 Brassica carinata HOM05D005362 ORTHO05D006895 4.5e-74 281.2 144 99.3
Thhalv10004006m.g Eutrema salsugineum HOM05D005362 ORTHO05D006895 6.5e-73 277.3 144 97.2
CARHR274640 Cardamine hirsuta HOM05D005362 ORTHO05D006895 6.1e-71 270.8 144 94.4
Sp2g24260 Schrenkiella parvula HOM05D005362 ORTHO05D006895 8.0e-71 270.4 144 93.8
AL8G37580 Arabidopsis lyrata HOM05D005362 ORTHO05D006895 3.4e-69 265.0 144 91.7
AT5G60960 Arabidopsis thaliana HOM05D005362 ORTHO05D006895 4.4e-69 264.6 144 91.0
Carub.0008s2165 Capsella rubella HOM05D005362 ORTHO05D006895 9.8e-69 263.5 144 92.4
Aa31LG11G2340 Aethionema arabicum HOM05D005362 ORTHO05D006895 1.2e-63 246.5 144 86.8
THA.LOC104804616 Tarenaya hassleriana HOM05D005362 ORTHO05D006895 4.9e-52 208.0 141 74.5
Potri.017G133400 Populus trichocarpa HOM05D005362 ORTHO05D006895 7.8e-50 200.7 144 72.9
TWI15G0078 Tripterygium wilfordii HOM05D005362 ORTHO05D006895 7.8e-50 200.7 144 72.2
Cpa.g.sc67.22 Carica papaya HOM05D005362 ORTHO05D006895 1.3e-49 199.9 135 75.6
CiPaw.11G055600 Carya illinoinensis HOM05D005362 ORTHO05D006895 8.6e-49 197.2 141 70.9
Oeu052452.1 Olea europaea HOM05D005362 ORTHO05D006895 8.6e-49 197.2 141 71.6
Sabra17G0110200 Salix brachista HOM05D005362 ORTHO05D006895 1.1e-48 196.8 144 72.2
Thecc.03G104700 Theobroma cacao HOM05D005362 ORTHO05D006895 1.9e-48 196.1 140 72.1
Cfa014169 Carpinus fangiana HOM05D005362 ORTHO05D006895 4.3e-48 194.9 141 70.9
COL.COLO4_24316 Corchorus olitorius HOM05D005362 ORTHO05D006895 4.3e-48 194.9 143 72.7
TWI81G0474 Tripterygium wilfordii HOM05D005362 ORTHO05D006895 4.3e-48 194.9 138 71.7
MELO3C017241.2 Cucumis melo HOM05D005362 ORTHO05D006895 5.6e-48 194.5 141 68.1
Gohir.D12G186500 Gossypium hirsutum HOM05D005362 ORTHO05D006895 2.1e-47 192.6 140 72.1
Gohir.A12G183600 Gossypium hirsutum HOM05D005362 ORTHO05D006895 2.8e-47 192.2 140 72.1
Duzib205G1468 Durio zibethinus HOM05D005362 ORTHO05D006895 3.6e-47 191.8 140 71.4
Gorai.008G199900 Gossypium raimondii HOM05D005362 ORTHO05D006895 3.6e-47 191.8 140 72.1
Cc11_g04710 Coffea canephora HOM05D005362 ORTHO05D006895 4.7e-47 191.4 141 69.5
Sed0019900 Sechium edule HOM05D005362 ORTHO05D006895 6.2e-47 191.0 141 68.8
Manes.06G082600 Manihot esculenta HOM05D005362 ORTHO05D006895 8.0e-47 190.7 140 70.0
Haze_22893 Corylus avellana HOM05D005362 ORTHO05D006895 6.8e-46 187.6 141 69.5
Lj5P134T43 Lonicera japonica HOM05D005362 ORTHO05D006895 8.9e-46 187.2 141 68.1
MSTRG.11331 Avicennia marina HOM05D005362 ORTHO05D006895 1.2e-45 186.8 141 68.1
Prupe.5G207600 Prunus persica HOM05D005362 ORTHO05D006895 1.2e-45 186.8 141 67.4
unitig_26.g9670 Utricularia gibba HOM05D005362 ORTHO05D006895 1.5e-45 186.4 141 67.4
TAR371G1139 Trochodendron aralioides HOM05D005362 ORTHO05D006895 2.0e-45 186.0 141 66.0
SGA_v2.0_scaffold28G11735 Striga asiatica HOM05D005362 ORTHO05D006895 2.6e-45 185.7 141 67.4
Actinidia35047 Actinidia chinensis HOM05D005362 ORTHO05D006895 1.3e-44 183.3 140 66.4
Migut.B00504 Erythranthe guttata HOM05D005362 ORTHO05D006895 1.3e-44 183.3 141 67.4
FAN08G0864 Fragaria x ananassa HOM05D005362 ORTHO05D006895 2.2e-44 182.6 141 65.2
Dinv17441 Davidia involucrata HOM05D005362 ORTHO05D006895 4.9e-44 181.4 141 65.2
FAN13G2767 Fragaria x ananassa HOM05D005362 ORTHO05D006895 4.9e-44 181.4 141 64.5
Lalb_Chr07g0178371 Lupinus albus HOM05D005362 ORTHO05D006895 4.9e-44 181.4 143 65.0
CSS0010906 Camellia sinensis var. sinensis HOM05D005362 ORTHO05D006895 1.1e-43 180.3 144 65.3
CSS0049665 Camellia sinensis var. sinensis HOM05D005362 ORTHO05D006895 1.1e-43 180.3 144 65.3
CAN.G1228.5 Capsicum annuum HOM05D005362 ORTHO05D006895 1.4e-43 179.9 141 66.0
Lj2g0009795 Lotus japonicus HOM05D005362 ORTHO05D006895 1.4e-43 179.9 144 66.7
Psat7g043680 Pisum sativum HOM05D005362 ORTHO05D006895 1.9e-43 179.5 139 65.5
Lj1g0020401 Lotus japonicus HOM05D005362 ORTHO05D006895 2.4e-43 179.1 144 67.4
Solyc03g114920.1 Solanum lycopersicum HOM05D005362 ORTHO05D006895 2.4e-43 179.1 141 63.8
ClCG06G015530 Citrullus lanatus HOM05D005362 ORTHO05D006895 3.2e-43 178.7 132 70.5
Hma1.2p1_0384F.1_g140800 Hydrangea macrophylla HOM05D005362 ORTHO05D006895 4.1e-43 178.3 140 64.3
MBI06_g05054_MAGBIO Magnolia biondii HOM05D005362 ORTHO05D006895 4.1e-43 178.3 142 63.4
CsaV3_1G003420 Cucumis sativus L. HOM05D005362 ORTHO05D006895 5.4e-43 177.9 142 64.8
Phvul.007G187600 Phaseolus vulgaris HOM05D005362 ORTHO05D006895 5.4e-43 177.9 141 66.0
Nitab4.5_0000939g0040 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.2e-42 176.8 141 65.2
Ca_17613_v3 Cicer arietinum L. HOM05D005362 ORTHO05D006895 1.6e-42 176.4 144 64.6
FvH4_5g29994 Fragaria vesca HOM05D005362 ORTHO05D006895 1.6e-42 176.4 141 63.8
Nitab4.5_0012631g0030 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.6e-42 176.4 141 64.5
RcHm_v2.0_Chr7g0224161 Rosa chinensis HOM05D005362 ORTHO05D006895 1.6e-42 176.4 141 63.1
Sopen03g034000 Solanum pennellii HOM05D005362 ORTHO05D006895 1.6e-42 176.4 141 64.5
FAN18G1237 Fragaria x ananassa HOM05D005362 ORTHO05D006895 2.1e-42 176.0 141 63.8
Lsat_1_v5_gn_5_23641 Lactuca sativa HOM05D005362 ORTHO05D006895 2.1e-42 176.0 137 65.7
PGSC0003DMG400024629 Solanum tuberosum HOM05D005362 ORTHO05D006895 2.1e-42 176.0 141 64.5
VMungo0720G1218 Vigna mungo HOM05D005362 ORTHO05D006895 2.1e-42 176.0 138 65.2
MD14G1214300 Malus domestica HOM05D005362 ORTHO05D006895 4.6e-42 174.9 147 63.9
Glyma.10G162500 Glycine max HOM05D005362 ORTHO05D006895 6.0e-42 174.5 141 64.5
Rhsim12G0149500 Rhododendron simsii HOM05D005362 ORTHO05D006895 6.0e-42 174.5 141 65.2
Rhsim12G0149700 Rhododendron simsii HOM05D005362 ORTHO05D006895 6.0e-42 174.5 141 65.2
Nitab4.5_0003441g0070 Nicotiana tabacum HOM05D005362 ORTHO05D006895 7.8e-42 174.1 141 64.5
QL07p000780 Quercus lobata HOM05D005362 ORTHO05D006895 1.7e-41 172.9 142 64.8
SHI17437 Sapria himalayana HOM05D005362 ORTHO05D006895 1.7e-41 172.9 141 65.2
TPR.G37431 Trifolium pratense HOM05D005362 ORTHO05D006895 2.3e-41 172.6 140 63.6
Medtr8g094650 Medicago truncatula HOM05D005362 ORTHO05D006895 3.0e-41 172.2 135 65.2
GSVIVG01008125001 Vitis vinifera HOM05D005362 ORTHO05D006895 3.0e-41 172.2 141 63.8
Glyma.20G225100 Glycine max HOM05D005362 ORTHO05D006895 8.6e-41 170.6 141 63.8
PSO170G2279 Papaver somniferum HOM05D005362 ORTHO05D006895 8.6e-41 170.6 141 62.4
PSO017G2639 Papaver somniferum HOM05D005362 ORTHO05D006895 1.1e-40 170.2 141 62.4
Aqoxy3G03650 Aquilegia oxysepala HOM05D005362 ORTHO05D006895 3.3e-40 168.7 141 59.6
HanXRQChr05g0154331 Helianthus annuus HOM05D005362 ORTHO05D006895 4.3e-40 168.3 141 61.7
AUR62029951 Chenopodium quinoa HOM05D005362 ORTHO05D006895 7.3e-40 167.5 141 60.3
Hund02565 Selenicereus undatus HOM05D005362 ORTHO05D006895 7.3e-40 167.5 140 60.7
AUR62033752 Chenopodium quinoa HOM05D005362 ORTHO05D006895 9.5e-40 167.2 141 61.0
Peaxi162Scf00201g00422 Petunia axillaris HOM05D005362 ORTHO05D006895 9.5e-40 167.2 133 63.2
EL10Ac5g12946 Beta vulgaris HOM05D005362 ORTHO05D006895 1.6e-39 166.4 141 61.0
Sc10g0009660 Simmondsia chinensis HOM05D005362 ORTHO05D006895 1.6e-39 166.4 141 59.6
Ah.11g048060 Amaranthus hybridus HOM05D005362 ORTHO05D006895 2.1e-39 166.0 136 61.8
PSO017G2138 Papaver somniferum HOM05D005362 ORTHO05D006895 2.1e-39 166.0 141 61.0
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 2.8e-39 165.6 131 63.4
DCAR_022335 Daucus carota HOM05D005362 ORTHO05D006895 1.2e-37 160.2 142 60.6
HPP92_008260 Vanilla planifolia HOM05D005362 ORTHO05D006895 1.2e-37 160.2 135 60.0
PSO478G3079 Papaver somniferum HOM05D005362 ORTHO05D006895 1.5e-37 159.8 137 60.6
HPP92_008265 Vanilla planifolia HOM05D005362 ORTHO05D006895 2.6e-37 159.1 135 60.0
ECA246G1962 Erigeron canadensis HOM05D005362 ORTHO05D006895 3.4e-37 158.7 138 60.1
FAN10G2687 Fragaria x ananassa HOM05D005362 ORTHO05D006895 7.5e-37 157.5 140 58.6
FAN10G2726 Fragaria x ananassa HOM05D005362 ORTHO05D006895 7.5e-37 157.5 140 58.6
FAN06G4934 Fragaria x ananassa HOM05D005362 ORTHO05D006895 1.3e-36 156.8 123 62.6
SHI19627 Sapria himalayana HOM05D005362 ORTHO05D006895 1.3e-36 156.8 143 60.1
Nitab4.5_0010968g0030 Nicotiana tabacum HOM05D005362 ORTHO05D006895 2.4e-35 152.5 142 59.9
HPP92_008264 Vanilla planifolia HOM05D005362 ORTHO05D006895 3.2e-35 152.1 135 57.8
vmacro16484 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 1.1e-32 143.7 115 60.0
Zm00001eb108830 Zea mays HOM05D005362 ORTHO05D006895 2.8e-31 139.0 141 53.2
Os07g0603900 Oryza sativa ssp. japonica HOM05D005362 ORTHO05D006895 1.1e-30 137.1 141 51.8
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 3.1e-30 135.6 98 63.3
CDE10G0094 Ceratophyllum demersum HOM05D005362 ORTHO05D006895 1.2e-29 133.7 141 50.4
MD06G1203500 Malus domestica HOM05D005362 ORTHO05D006895 8.4e-28 127.5 97 63.9
Medtr0265s0020 Medicago truncatula HOM05D005362 ORTHO05D006895 3.9e-25 118.6 102 56.9
Medtr1g058940 Medicago truncatula HOM05D005362 ORTHO05D006895 3.9e-25 118.6 102 56.9
vmacro08819 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 1.5e-24 116.7 139 49.6
Nitab4.5_0003441g0090 Nicotiana tabacum HOM05D005362 ORTHO05D006895 5.8e-21 104.8 66 72.7
Atru.chr9.504 Acer truncatum HOM05D005362 ORTHO05D006895 3.2e-19 99.0 89 62.9
RcHm_v2.0_Chr7g0224181 Rosa chinensis HOM05D005362 ORTHO05D006895 5.6e-16 88.2 64 62.5
unitig_749.g13427 Utricularia gibba HOM05D005362 ORTHO05D006895 9.6e-16 87.4 75 53.3
Eucgr.K02538 Eucalyptus grandis HOM05D005362 ORTHO05D006895 7.6e-13 77.8 65 69.2
PGR044G2646 Punica granatum HOM05D005362 ORTHO05D006895 2.9e-12 75.9 68 63.2
Ciclev10019809m.g Citrus clementina HOM05D005362 ORTHO05D006895 3.8e-12 75.5 66 68.2
TPR.G31001 Trifolium pratense HOM05D005362 ORTHO05D006895 8.4e-12 74.3 75 52.0
Sabra12G0047300 Salix brachista HOM05D007937 ORTHO05D010000 1.9e-08 63.2 135 31.1
ATR0782G126 Amborella trichopoda HOM05D005362 ORTHO05D006895 5.6e-08 61.6 81 45.7
Potri.012G068400 Populus trichocarpa HOM05D007937 ORTHO05D010000 9.6e-08 60.8 135 30.4
CDE07G0962 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 3.7e-07 58.9 129 28.7
ATR0618G438 Amborella trichopoda HOM05D005362 ORTHO05D006895 9.0e-06 54.3 69 49.3


User provided reference genes

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