Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p42920 Brassica napus HOM05D004187 ORTHO05D004890 1.5e-89 332.8 162 100.0
BraA03t13436Z Brassica rapa HOM05D004187 ORTHO05D004890 1.5e-89 332.8 162 100.0
BcaC01g03429 Brassica carinata HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
BcaC01g03430 Brassica carinata HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
C03p52670 Brassica napus HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
BolC3t17535H Brassica oleracea HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
Sp3g20440 Schrenkiella parvula HOM05D004187 ORTHO05D004890 1.0e-74 283.5 160 85.6
BcaB06g26379 Brassica carinata HOM05D004187 ORTHO05D004890 9.0e-71 270.4 162 80.2
BraA05t21487Z Brassica rapa HOM05D004187 ORTHO05D004890 1.9e-68 262.7 163 79.8
BcaC05g28028 Brassica carinata HOM05D004187 ORTHO05D004890 2.4e-68 262.3 162 78.4
C05p40440 Brassica napus HOM05D004187 ORTHO05D004890 2.4e-68 262.3 162 78.4
BolC5t32785H Brassica oleracea HOM05D004187 ORTHO05D004890 2.4e-68 262.3 162 78.4
A05p26020 Brassica napus HOM05D004187 ORTHO05D004890 3.5e-67 258.5 163 78.5
Carub.0003s2284 Capsella rubella HOM05D004187 ORTHO05D004890 7.9e-67 257.3 155 79.4
Thhalv10021679m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 7.9e-67 257.3 157 80.9
AL3G36980 Arabidopsis lyrata HOM05D004187 ORTHO05D004890 5.1e-66 254.6 163 75.5
AT3G22680 Arabidopsis thaliana HOM05D004187 ORTHO05D004890 8.7e-66 253.8 153 79.1
CARHR098560 Cardamine hirsuta HOM05D004187 ORTHO05D004890 9.0e-63 243.8 150 77.3
Thhalv10017318m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.8e-55 219.5 172 68.0
Aa31LG3G2350 Aethionema arabicum HOM05D004187 ORTHO05D004890 2.4e-55 219.2 160 68.8
Thhalv10029384m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 2.0e-54 216.1 162 71.0
THA.LOC104803042 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 8.4e-53 210.7 161 62.1
RcHm_v2.0_Chr4g0407591 Rosa chinensis HOM05D004187 ORTHO05D004890 2.3e-50 202.6 153 62.1
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 3.0e-50 202.2 161 60.2
FvH4_4g00760 Fragaria vesca HOM05D004187 ORTHO05D004890 3.9e-50 201.8 156 59.0
FAN12G2319 Fragaria x ananassa HOM05D004187 ORTHO05D004890 3.9e-50 201.8 156 59.0
MD16G1197500 Malus domestica HOM05D004187 ORTHO05D004890 5.1e-50 201.4 161 59.6
FAN22G0369 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.1e-49 200.3 156 59.0
Gohir.A10G118400 Gossypium hirsutum HOM05D004187 ORTHO05D004890 1.9e-49 199.5 149 59.7
Eucgr.H03428 Eucalyptus grandis HOM05D004187 ORTHO05D004890 5.7e-49 198.0 161 59.0
MBI11_g32998_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 5.7e-49 198.0 159 57.9
QL06p001566 Quercus lobata HOM05D004187 ORTHO05D004890 5.7e-49 198.0 165 56.4
Nn1g02390 Nelumbo nucifera HOM05D004187 ORTHO05D004890 7.4e-49 197.6 157 58.6
Rhsim04G0199500 Rhododendron simsii HOM05D004187 ORTHO05D004890 7.4e-49 197.6 157 60.5
CiPaw.02G122700 Carya illinoinensis HOM05D004187 ORTHO05D004890 1.3e-48 196.8 181 53.6
TWI73G1209 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 1.3e-48 196.8 166 56.0
Haze_11210 Corylus avellana HOM05D004187 ORTHO05D004890 1.6e-48 196.4 181 53.6
FAN13G2545 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.6e-48 196.4 156 58.3
Gorai.011G165600 Gossypium raimondii HOM05D004187 ORTHO05D004890 1.6e-48 196.4 149 59.1
Potri.008G155800 Populus trichocarpa HOM05D004187 ORTHO05D004890 1.6e-48 196.4 161 56.5
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 1.6e-48 196.4 133 64.7
Gohir.D10G148300 Gossypium hirsutum HOM05D004187 ORTHO05D004890 2.2e-48 196.1 149 59.7
Cfa008463 Carpinus fangiana HOM05D004187 ORTHO05D004890 2.8e-48 195.7 181 53.0
Sabra08G0118600 Salix brachista HOM05D004187 ORTHO05D004890 3.7e-48 195.3 161 56.5
FvH4_5g32450 Fragaria vesca HOM05D004187 ORTHO05D004890 4.8e-48 194.9 156 58.3
FAN18G3642 Fragaria x ananassa HOM05D004187 ORTHO05D004890 4.8e-48 194.9 156 58.3
TAR362G0393 Trochodendron aralioides HOM05D004187 ORTHO05D004890 8.2e-48 194.1 161 59.0
Dinv25939 Davidia involucrata HOM05D004187 ORTHO05D004890 1.4e-47 193.4 133 62.4
Lalb_Chr05g0211101 Lupinus albus HOM05D004187 ORTHO05D004890 5.3e-47 191.4 120 69.2
Sed0024336 Sechium edule HOM05D004187 ORTHO05D004890 5.3e-47 191.4 159 61.0
Rhsim02G0027200 Rhododendron simsii HOM05D004187 ORTHO05D004890 6.9e-47 191.0 155 55.5
Ciclev10005993m.g Citrus clementina HOM05D004187 ORTHO05D004890 9.0e-47 190.7 156 56.4
THA.LOC104808564 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 9.0e-47 190.7 150 58.0
Duzib212G0360 Durio zibethinus HOM05D004187 ORTHO05D004890 1.5e-46 189.9 143 58.7
TWI53G1349 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 2.6e-46 189.1 165 55.2
VMungo0251G0090 Vigna mungo HOM05D004187 ORTHO05D004890 2.6e-46 189.1 120 69.2
Actinidia40129 Actinidia chinensis HOM05D004187 ORTHO05D004890 4.5e-46 188.3 158 54.4
ClCG05G004990 Citrullus lanatus HOM05D004187 ORTHO05D004890 4.5e-46 188.3 160 58.8
CsaV3_3G013040 Cucumis sativus L. HOM05D004187 ORTHO05D004890 5.9e-46 188.0 160 60.6
Ca_24413_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 7.7e-46 187.6 123 68.3
MELO3C006513.2 Cucumis melo HOM05D004187 ORTHO05D004890 7.7e-46 187.6 160 60.0
Atru.chr4.2417 Acer truncatum HOM05D004187 ORTHO05D004890 1.3e-45 186.8 162 54.9
Atru.chr4.2392 Acer truncatum HOM05D004187 ORTHO05D004890 2.2e-45 186.0 149 58.4
Phvul.002G043400 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 2.2e-45 186.0 121 68.6
CANSAT78G1519 Cannabis sativa HOM05D004187 ORTHO05D004890 2.9e-45 185.7 153 56.2
Sed0012407 Sechium edule HOM05D004187 ORTHO05D004890 2.9e-45 185.7 160 58.8
TPR.G37887 Trifolium pratense HOM05D004187 ORTHO05D004890 2.9e-45 185.7 120 67.5
Medtr5g006610 Medicago truncatula HOM05D004187 ORTHO05D004890 5.0e-45 184.9 161 57.8
SalBow2G2347 Salvia bowleyana HOM05D004187 ORTHO05D004890 5.0e-45 184.9 153 57.5
arahy.Tifrunner.gnm1.ann1.Q4QH0F Arachis hypogaea HOM05D004187 ORTHO05D004890 6.5e-45 184.5 155 57.4
Psat2g190440 Pisum sativum HOM05D004187 ORTHO05D004890 6.5e-45 184.5 120 68.3
SalBow2G0844 Salvia bowleyana HOM05D004187 ORTHO05D004890 8.5e-45 184.1 153 57.5
Aqoxy2G03437 Aquilegia oxysepala HOM05D004187 ORTHO05D004890 1.4e-44 183.3 131 61.1
arahy.Tifrunner.gnm1.ann1.8FXP11 Arachis hypogaea HOM05D004187 ORTHO05D004890 1.4e-44 183.3 160 56.2
Glyma.01G235900 Glycine max HOM05D004187 ORTHO05D004890 1.4e-44 183.3 125 63.2
COL.COLO4_21526 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.9e-44 183.0 113 71.7
LjContig00408g0013113 Lotus japonicus HOM05D004187 ORTHO05D004890 1.9e-44 183.0 142 60.6
vmacro15360 Vaccinium macrocarpon HOM05D004187 ORTHO05D004890 1.9e-44 183.0 155 55.5
arahy.Tifrunner.gnm1.ann1.Q6C7EF Arachis hypogaea HOM05D004187 ORTHO05D004890 4.2e-44 181.8 153 57.5
Medtr5g006600 Medicago truncatula HOM05D004187 ORTHO05D004890 4.2e-44 181.8 120 64.2
arahy.Tifrunner.gnm1.ann1.LSRC2Y Arachis hypogaea HOM05D004187 ORTHO05D004890 7.2e-44 181.0 155 56.8
TPR.G37866 Trifolium pratense HOM05D004187 ORTHO05D004890 9.4e-44 180.6 157 54.8
CSS0045006 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 1.6e-43 179.9 135 60.0
Ca_24412_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.6e-43 179.9 134 60.4
Ca_30960_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.6e-43 179.9 134 60.4
AUR62001090 Chenopodium quinoa HOM05D004187 ORTHO05D004890 2.1e-43 179.5 152 56.6
Manes.15G031200 Manihot esculenta HOM05D004187 ORTHO05D004890 2.1e-43 179.5 161 54.0
FAN08G0419 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.7e-43 179.1 119 64.7
Manes.03G175300 Manihot esculenta HOM05D004187 ORTHO05D004890 2.7e-43 179.1 158 55.1
Nitab4.5_0000050g0260 Nicotiana tabacum HOM05D004187 ORTHO05D004890 2.7e-43 179.1 166 54.2
Lj3A731T58 Lonicera japonica HOM05D004187 ORTHO05D004890 1.0e-42 177.2 153 54.2
Nitab4.5_0001792g0010 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.4e-42 176.8 117 66.7
Psat2g190480 Pisum sativum HOM05D004187 ORTHO05D004890 1.8e-42 176.4 120 64.2
GSVIVG01018017001 Vitis vinifera HOM05D004187 ORTHO05D004890 1.8e-42 176.4 160 52.5
TAR633G0827 Trochodendron aralioides HOM05D004187 ORTHO05D004890 2.3e-42 176.0 127 59.8
Hma1.2p1_0207F.1_g088010 Hydrangea macrophylla HOM05D004187 ORTHO05D004890 3.0e-42 175.6 157 52.2
PGR129G0008 Punica granatum HOM05D004187 ORTHO05D004890 3.0e-42 175.6 159 54.7
PGR142G1722 Punica granatum HOM05D004187 ORTHO05D004890 3.0e-42 175.6 159 54.7
MSTRG.4047 Avicennia marina HOM05D004187 ORTHO05D004890 5.1e-42 174.9 153 55.6
CSS0034976 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 1.1e-41 173.7 152 52.0
Sopen10g014270 Solanum pennellii HOM05D004187 ORTHO05D004890 1.5e-41 173.3 161 54.7
Glyma.11G007300 Glycine max HOM05D004187 ORTHO05D004890 2.5e-41 172.6 114 64.9
Sc19g0004030 Simmondsia chinensis HOM05D004187 ORTHO05D004890 2.5e-41 172.6 162 52.5
PGSC0003DMG401028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.7e-40 169.9 161 54.0
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 4.8e-40 168.3 128 57.0
HPP92_009615 Vanilla planifolia HOM05D004187 ORTHO05D004890 4.8e-40 168.3 150 55.3
AUR62008916 Chenopodium quinoa HOM05D004187 ORTHO05D004890 6.3e-40 167.9 158 52.5
CDE07G0031 Ceratophyllum demersum HOM05D004187 ORTHO05D004890 4.1e-39 165.2 152 52.6
ECA233G0410 Erigeron canadensis HOM05D004187 ORTHO05D004890 5.3e-39 164.9 128 57.0
DCAR_031726 Daucus carota HOM05D004187 ORTHO05D004890 9.1e-39 164.1 153 51.0
PGSC0003DMG402028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 9.1e-39 164.1 117 65.0
ECA247G1582 Erigeron canadensis HOM05D004187 ORTHO05D004890 1.2e-38 163.7 128 55.5
Solyc10g045190.3 Solanum lycopersicum HOM05D004187 ORTHO05D004890 4.5e-38 161.8 117 65.0
PGSC0003DMG400039476 Solanum tuberosum HOM05D004187 ORTHO05D004890 5.9e-38 161.4 117 61.5
HanXRQChr08g0219391 Helianthus annuus HOM05D004187 ORTHO05D004890 1.0e-37 160.6 126 56.3
Rhsim03G0003800 Rhododendron simsii HOM05D004187 ORTHO05D004890 1.3e-37 160.2 162 49.4
PSO210G5857 Papaver somniferum HOM05D004187 ORTHO05D004890 1.7e-37 159.8 159 47.8
PSO170G4884 Papaver somniferum HOM05D004187 ORTHO05D004890 2.9e-37 159.1 159 47.8
Cc10_g08560 Coffea canephora HOM05D004187 ORTHO05D004890 3.8e-37 158.7 172 47.1
Migut.G00365 Erythranthe guttata HOM05D004187 ORTHO05D004890 8.5e-37 157.5 134 54.5
Nitab4.5_0000085g0360 Nicotiana tabacum HOM05D004187 ORTHO05D004890 8.5e-37 157.5 158 48.7
Dinv03045 Davidia involucrata HOM05D004187 ORTHO05D004890 1.1e-36 157.1 124 54.8
ATR0665G390 Amborella trichopoda HOM05D004187 ORTHO05D004890 1.9e-36 156.4 152 50.0
Nitab4.5_0001547g0030 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.9e-36 156.4 158 48.7
SGA_v2.0_scaffold191G40487 Striga asiatica HOM05D004187 ORTHO05D004890 2.5e-36 156.0 123 57.7
Actinidia32414 Actinidia chinensis HOM05D004187 ORTHO05D004890 5.5e-36 154.8 122 55.7
Peaxi162Scf00092g00016 Petunia axillaris HOM05D004187 ORTHO05D004890 2.7e-35 152.5 120 55.8
Solyc09g082480.2 Solanum lycopersicum HOM05D004187 ORTHO05D004890 6.1e-35 151.4 125 52.8
Sopen09g031340 Solanum pennellii HOM05D004187 ORTHO05D004890 7.9e-35 151.0 125 52.8
Lsat_1_v5_gn_8_21341 Lactuca sativa HOM05D004187 ORTHO05D004890 1.8e-34 149.8 123 52.8
Peaxi162Scf00245g00106 Petunia axillaris HOM05D004187 ORTHO05D004890 3.0e-34 149.1 120 55.8
PGSC0003DMG400040737 Solanum tuberosum HOM05D004187 ORTHO05D004890 8.8e-34 147.5 112 59.8
CAN.G1402.3 Capsicum annuum HOM05D004187 ORTHO05D004890 3.3e-33 145.6 123 52.0
unitig_22.g6822 Utricularia gibba HOM05D004187 ORTHO05D004890 8.2e-32 141.0 152 44.7
AUR62001087 Chenopodium quinoa HOM05D004187 ORTHO05D004890 7.0e-31 137.9 92 63.0
Cfa001472 Carpinus fangiana HOM05D004187 ORTHO05D004890 1.2e-30 137.1 127 52.0
Prupe.2G235500 Prunus persica HOM05D004187 ORTHO05D004890 2.6e-30 136.0 114 50.9
PGSC0003DMG400039782 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.6e-30 136.0 103 59.2
Potri.008G076500 Populus trichocarpa HOM05D004187 ORTHO05D004890 3.5e-30 135.6 124 52.4
QL08p059729 Quercus lobata HOM05D004187 ORTHO05D004890 5.9e-30 134.8 123 45.5
RcHm_v2.0_Chr1g0367131 Rosa chinensis HOM05D004187 ORTHO05D004890 5.0e-29 131.7 122 49.2
Sopen09g031300 Solanum pennellii HOM05D004187 ORTHO05D004890 6.5e-29 131.3 114 50.9
Haze_17068 Corylus avellana HOM05D004187 ORTHO05D004890 1.1e-28 130.6 166 41.6
Atru.chr1.2916 Acer truncatum HOM05D004187 ORTHO05D004890 4.0e-26 122.1 113 47.8
COL.COLO4_15044 Corchorus olitorius HOM05D004187 ORTHO05D004890 5.7e-25 118.2 123 46.3
Manes.12G002301 Manihot esculenta HOM05D004187 ORTHO05D004890 7.5e-25 117.9 110 51.8
Nn6g35138 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.7e-24 116.7 109 50.5
Atru.chr7.913 Acer truncatum HOM05D004187 ORTHO05D004890 2.8e-24 115.9 114 45.6
Sopen09g031290 Solanum pennellii HOM05D004187 ORTHO05D004890 4.8e-24 115.2 100 50.0
Atru.chr1.2920 Acer truncatum HOM05D004187 ORTHO05D004890 1.8e-23 113.2 114 46.5
Lj1g0009372 Lotus japonicus HOM05D004187 ORTHO05D004890 3.1e-23 112.5 123 43.9
Duzib114G0324 Durio zibethinus HOM05D004187 ORTHO05D004890 9.1e-23 110.9 112 46.4
VMungo1383G1788 Vigna mungo HOM05D004187 ORTHO05D004890 9.1e-23 110.9 121 43.0
Lj1g0019332 Lotus japonicus HOM05D004187 ORTHO05D004890 1.2e-22 110.5 150 38.7
Lalb_Chr10g0091621 Lupinus albus HOM05D004187 ORTHO05D004890 1.6e-22 110.2 118 43.2
Solyc09g082420.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.7e-22 109.4 89 53.9
BcaB03g14654 Brassica carinata HOM05D004187 ORTHO05D004890 4.5e-22 108.6 76 69.7
Solyc09g082430.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 5.9e-22 108.2 96 52.1
Phvul.008G010500 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 1.7e-21 106.7 119 42.0
PGSC0003DMG400032269 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.9e-21 105.9 84 54.8
Ca_12246_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 6.5e-21 104.8 107 44.9
Lj1g0011366 Lotus japonicus HOM05D004187 ORTHO05D004890 3.2e-20 102.4 123 39.0
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 3.6e-19 99.0 121 43.8
PGSC0003DMG400013771 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.2e-17 94.0 77 54.5
Solyc09g082440.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.7e-16 90.1 73 53.4
Lalb_Chr16g0376451 Lupinus albus HOM05D004187 ORTHO05D004890 1.4e-15 87.0 74 58.1
PGSC0003DMG400032265 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.9e-13 79.3 68 50.0
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 1.1e-12 77.4 125 33.6
Sabra10G0059200 Salix brachista HOM05D004187 ORTHO05D004890 4.2e-12 75.5 65 50.8
Zm00001eb275620 Zea mays HOM05D004187 ORTHO05D004890 7.5e-09 64.7 57 56.1
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 9.8e-09 64.3 120 31.7
Potri.010G083751 Populus trichocarpa HOM05D004187 ORTHO05D004890 2.8e-08 62.8 42 57.1


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