Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p29990 Brassica napus HOM05D006131 ORTHO05D021223 3.6e-64 248.1 122 100.0
A03p29960 Brassica napus HOM05D006131 ORTHO05D008649 3.2e-60 235.0 135 89.6
BraA03t12185Z Brassica rapa HOM05D006131 ORTHO05D008649 9.2e-60 233.4 135 88.9
BolC3t15934H Brassica oleracea HOM05D006131 ORTHO05D008649 5.9e-59 230.7 135 87.4
C03p36250 Brassica napus HOM05D006131 ORTHO05D008649 7.8e-59 230.3 135 86.7
Sp6g04490 Schrenkiella parvula HOM05D006131 ORTHO05D008649 1.3e-58 229.6 135 86.7
Thhalv10028396m.g Eutrema salsugineum HOM05D006131 ORTHO05D008649 3.9e-58 228.0 135 85.9
AT4G04350 Arabidopsis thaliana HOM05D006131 ORTHO05D008649 2.1e-56 222.2 135 84.4
CARHR253090 Cardamine hirsuta HOM05D006131 ORTHO05D008649 1.8e-55 219.2 134 82.1
AL6G47890 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 2.0e-54 215.7 135 82.2
AL6G47902 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 2.0e-54 215.7 135 82.2
Carub.0006s3219 Capsella rubella HOM05D006131 ORTHO05D008649 2.0e-54 215.7 135 82.2
Aa31LG9G9850 Aethionema arabicum HOM05D006131 ORTHO05D008649 5.8e-54 214.2 135 80.7
THA.LOC104806315 Tarenaya hassleriana HOM05D006131 ORTHO05D008649 3.5e-51 204.9 135 77.0
Cpa.g.sc152.47 Carica papaya HOM05D006131 ORTHO05D008649 1.4e-47 193.0 135 71.9
Ciclev10014171m.g Citrus clementina HOM05D006131 ORTHO05D008649 1.4e-47 193.0 135 68.9
VMungo1215G1261 Vigna mungo HOM05D006131 ORTHO05D008649 3.1e-47 191.8 131 72.5
GSVIVG01012668001 Vitis vinifera HOM05D006131 ORTHO05D008649 3.1e-47 191.8 135 71.9
Medtr4g132500 Medicago truncatula HOM05D006131 ORTHO05D008649 1.5e-46 189.5 131 69.5
Glyma.07G263100 Glycine max HOM05D006131 ORTHO05D008649 3.4e-46 188.3 131 70.2
TPR.G36994 Trifolium pratense HOM05D006131 ORTHO05D008649 3.4e-46 188.3 131 69.5
arahy.Tifrunner.gnm1.ann1.34DY78 Arachis hypogaea HOM05D006131 ORTHO05D008649 7.5e-46 187.2 135 69.6
arahy.Tifrunner.gnm1.ann1.EVIY4K Arachis hypogaea HOM05D006131 ORTHO05D008649 7.5e-46 187.2 135 69.6
Gohir.D06G156700 Gossypium hirsutum HOM05D006131 ORTHO05D008649 1.7e-45 186.0 130 70.0
Gorai.010G183100 Gossypium raimondii HOM05D006131 ORTHO05D008649 1.7e-45 186.0 130 70.0
MD10G1325600 Malus domestica HOM05D006131 ORTHO05D008649 2.2e-45 185.7 135 69.6
Duzib235G1477 Durio zibethinus HOM05D006131 ORTHO05D008649 2.9e-45 185.3 131 70.2
Lj1C1234T13 Lonicera japonica HOM05D006131 ORTHO05D008649 2.9e-45 185.3 131 68.7
Psat4g005600 Pisum sativum HOM05D006131 ORTHO05D008649 2.9e-45 185.3 130 69.2
QL05p072288 Quercus lobata HOM05D006131 ORTHO05D008649 2.9e-45 185.3 131 71.0
Ca_21065_v3 Cicer arietinum L. HOM05D006131 ORTHO05D008649 3.7e-45 184.9 131 67.9
COL.COLO4_31819 Corchorus olitorius HOM05D006131 ORTHO05D008649 3.7e-45 184.9 131 70.2
Eucgr.E03997 Eucalyptus grandis HOM05D006131 ORTHO05D008649 4.9e-45 184.5 131 69.5
CiPaw.09G096900 Carya illinoinensis HOM05D006131 ORTHO05D008649 6.4e-45 184.1 135 68.1
Nn7g38008 Nelumbo nucifera HOM05D006131 ORTHO05D008649 6.4e-45 184.1 135 69.6
Haze_06845 Corylus avellana HOM05D006131 ORTHO05D008649 8.3e-45 183.7 135 68.9
Gohir.A06G150500 Gossypium hirsutum HOM05D006131 ORTHO05D008649 8.3e-45 183.7 130 68.5
HanXRQChr16g0516961 Helianthus annuus HOM05D006131 ORTHO05D008649 8.3e-45 183.7 135 66.7
Potri.011G009600 Populus trichocarpa HOM05D006131 ORTHO05D008649 8.3e-45 183.7 135 68.1
Lalb_Chr07g0177101 Lupinus albus HOM05D006131 ORTHO05D008649 1.4e-44 183.0 131 67.9
Thecc.06G226400 Theobroma cacao HOM05D006131 ORTHO05D008649 2.4e-44 182.2 131 68.7
Cfa000174 Carpinus fangiana HOM05D006131 ORTHO05D008649 4.1e-44 181.4 135 68.1
Aqoxy1G03037 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 9.2e-44 180.3 135 68.1
Sed0009561 Sechium edule HOM05D006131 ORTHO05D008649 9.2e-44 180.3 131 70.2
TWI38G1228 Tripterygium wilfordii HOM05D006131 ORTHO05D008649 1.2e-43 179.9 135 66.7
CANSAT56G3890 Cannabis sativa HOM05D006131 ORTHO05D008649 1.6e-43 179.5 131 70.2
Cc09_g01330 Coffea canephora HOM05D006131 ORTHO05D008649 1.6e-43 179.5 131 68.7
Manes.17G028300 Manihot esculenta HOM05D006131 ORTHO05D008649 1.6e-43 179.5 135 67.4
TAR627G0028 Trochodendron aralioides HOM05D006131 ORTHO05D008649 1.6e-43 179.5 130 69.2
Lj4g0011530 Lotus japonicus HOM05D006131 ORTHO05D008649 2.7e-43 178.7 135 65.2
Sabra11G0007600 Salix brachista HOM05D006131 ORTHO05D008649 2.7e-43 178.7 125 69.6
Aqoxy1G02886 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 3.5e-43 178.3 135 67.4
Oeu051199.1 Olea europaea HOM05D006131 ORTHO05D008649 6.0e-43 177.6 131 67.9
PGR042G2674 Punica granatum HOM05D006131 ORTHO05D008649 6.0e-43 177.6 135 65.2
Ah.09g234600 Amaranthus hybridus HOM05D006131 ORTHO05D008649 7.8e-43 177.2 131 67.9
Lsat_1_v5_gn_4_61541 Lactuca sativa HOM05D006131 ORTHO05D008649 1.3e-42 176.4 135 65.2
vmacro03670 Vaccinium macrocarpon HOM05D006131 ORTHO05D008649 1.3e-42 176.4 135 65.2
AUR62012745 Chenopodium quinoa HOM05D006131 ORTHO05D008649 2.3e-42 175.6 131 67.2
AUR62021912 Chenopodium quinoa HOM05D006131 ORTHO05D008649 2.3e-42 175.6 131 67.2
Prupe.4G016400 Prunus persica HOM05D006131 ORTHO05D008649 2.3e-42 175.6 135 67.4
EL10Ac8g20116 Beta vulgaris HOM05D006131 ORTHO05D008649 3.9e-42 174.9 131 67.2
FvH4_3g01570 Fragaria vesca HOM05D006131 ORTHO05D008649 8.6e-42 173.7 135 63.7
CSS0011000 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 1.1e-41 173.3 124 68.5
RcHm_v2.0_Chr5g0002381 Rosa chinensis HOM05D006131 ORTHO05D008649 1.1e-41 173.3 135 65.2
Actinidia02346 Actinidia chinensis HOM05D006131 ORTHO05D008649 1.5e-41 172.9 131 65.6
FAN25G2733 Fragaria x ananassa HOM05D006131 ORTHO05D008649 1.5e-41 172.9 135 63.0
ClCG01G021720 Citrullus lanatus HOM05D006131 ORTHO05D008649 2.5e-41 172.2 126 65.9
MBI07_g07142_MAGBIO Magnolia biondii HOM05D006131 ORTHO05D008649 3.3e-41 171.8 129 66.7
CAN.G1014.35 Capsicum annuum HOM05D006131 ORTHO05D008649 1.2e-40 169.9 125 68.8
CsaV3_6G048760 Cucumis sativus L. HOM05D006131 ORTHO05D008649 1.6e-40 169.5 131 65.6
Hma1.2p1_0298F.1_g117540 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.6e-40 169.5 130 65.4
Hma1.2p1_0298F.1_g117550 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.6e-40 169.5 130 65.4
Hund21429 Selenicereus undatus HOM05D006131 ORTHO05D008649 2.8e-40 168.7 131 63.4
SalBow8G4181 Salvia bowleyana HOM05D006131 ORTHO05D008649 4.7e-40 167.9 135 60.7
Nitab4.5_0001409g0150 Nicotiana tabacum HOM05D006131 ORTHO05D008649 8.1e-40 167.2 136 64.0
Nitab4.5_0004743g0170 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.1e-39 166.8 132 65.2
Solyc02g080990.2 Solanum lycopersicum HOM05D006131 ORTHO05D008649 1.1e-39 166.8 125 66.4
Sopen02g025670 Solanum pennellii HOM05D006131 ORTHO05D008649 1.1e-39 166.8 125 66.4
Migut.M01378 Erythranthe guttata HOM05D006131 ORTHO05D008649 1.8e-39 166.0 136 61.8
Peaxi162Scf00178g00056 Petunia axillaris HOM05D006131 ORTHO05D008649 2.3e-39 165.6 125 65.6
Aqoxy1G02667 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 2.0e-38 162.5 127 65.4
DCAR_028357 Daucus carota HOM05D006131 ORTHO05D008649 2.0e-38 162.5 135 63.0
unitig_748.g7594 Utricularia gibba HOM05D006131 ORTHO05D008649 2.0e-38 162.5 133 60.9
PSO541G3086 Papaver somniferum HOM05D006131 ORTHO05D008649 1.3e-37 159.8 126 62.7
Zm00001eb334790 Zea mays HOM05D006131 ORTHO05D008649 1.3e-37 159.8 126 60.3
Os01g0120300 Oryza sativa ssp. japonica HOM05D006131 ORTHO05D008649 4.9e-37 157.9 123 61.8
BcaB01g02598 Brassica carinata HOM05D006131 ORTHO05D008649 1.1e-36 156.8 92 84.8
SGA_v2.0_scaffold7G03775 Striga asiatica HOM05D006131 ORTHO05D008649 1.0e-34 150.2 122 63.9
MD05G1351000 Malus domestica HOM05D006131 ORTHO05D021223 1.3e-34 149.8 117 67.5
Nitab4.5_0004743g0060 Nicotiana tabacum HOM05D006131 ORTHO05D008649 8.6e-34 147.1 159 51.6
ECA234G4389 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.3e-33 145.2 106 67.9
ATR0317G090 Amborella trichopoda HOM05D006131 ORTHO05D021223 9.6e-33 143.7 124 56.5
ATR0317G053 Amborella trichopoda HOM05D006131 ORTHO05D008649 3.6e-32 141.7 124 55.6
Mapoly0024s0038 Marchantia polymorpha HOM05D006131 ORTHO05D008649 8.9e-31 137.1 124 54.0
Pp3c7_13710 Physcomitrium patens HOM05D006131 ORTHO05D008649 2.2e-29 132.5 124 51.6
CSS0007614 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 2.9e-29 132.1 117 59.8
Rhsim13G0150700 Rhododendron simsii HOM05D006131 ORTHO05D008649 3.9e-26 121.7 273 32.2
Cre13.g578451 Chlamydomonas reinhardtii HOM05D006131 ORTHO05D008649 1.1e-25 120.2 125 51.2
PRCOL_00006602 Prasinoderma coloniale HOM05D006131 ORTHO05D008649 2.1e-24 115.9 130 49.2
CDE04G0704 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 3.6e-24 115.2 103 58.3
Oeu051886.1 Olea europaea HOM05D006131 ORTHO05D021223 8.1e-24 114.0 129 48.1
CBR_g51980 Chara braunii HOM05D006131 ORTHO05D008649 9.0e-23 110.5 124 45.2
MCO01G222 Micromonas commoda HOM05D006131 ORTHO05D008649 1.3e-21 106.7 124 42.7
AagrBONN_evm.TU.Sc2ySwM_362.2691 Anthoceros agrestis HOM05D006131 ORTHO05D008649 1.7e-21 106.3 100 54.0
Glyma.17G010750 Glycine max HOM05D006131 ORTHO05D008649 1.6e-19 99.8 74 66.2
SEGI_08904 Sequoiadendron giganteum HOM05D006131 ORTHO05D021223 3.3e-17 92.0 74 59.5
HPP92_003825 Vanilla planifolia HOM05D006131 ORTHO05D008649 5.4e-12 74.7 39 79.5
MELO3C007414.2 Cucumis melo HOM05D006131 ORTHO05D008649 1.9e-09 66.2 37 75.7
SEGI_22271 Sequoiadendron giganteum HOM05D006131 ORTHO05D021223 4.3e-09 65.1 37 73.0


User provided reference genes

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