Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p17270 Brassica napus HOM05D005041 ORTHO05D006003 1.9e-225 785.4 380 100.0
BraA03t11001Z Brassica rapa HOM05D005041 ORTHO05D006003 4.3e-225 784.3 380 99.7
C03p20380 Brassica napus HOM05D005041 ORTHO05D006003 2.0e-222 775.4 380 97.9
BolC3t14416H Brassica oleracea HOM05D005041 ORTHO05D006003 2.0e-222 775.4 380 97.9
BcaB01g04071 Brassica carinata HOM05D005041 ORTHO05D006003 5.9e-222 773.9 380 98.2
BcaC02g11169 Brassica carinata HOM05D005041 ORTHO05D006003 1.2e-219 766.1 380 97.6
C04p19760 Brassica napus HOM05D005041 ORTHO05D006003 1.2e-219 766.1 380 97.6
BolC4t23509H Brassica oleracea HOM05D005041 ORTHO05D006003 1.2e-219 766.1 380 97.6
Sp4g13380 Schrenkiella parvula HOM05D005041 ORTHO05D006003 1.2e-219 766.1 380 97.1
A05p14760 Brassica napus HOM05D005041 ORTHO05D006003 3.0e-218 761.5 380 97.1
BcaB02g10347 Brassica carinata HOM05D005041 ORTHO05D006003 3.9e-218 761.1 380 96.8
BraA05t20405Z Brassica rapa HOM05D005041 ORTHO05D006003 4.1e-215 751.1 382 95.8
AL4G25850 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 4.4e-209 731.1 382 93.5
Carub.0004s1211 Capsella rubella HOM05D005041 ORTHO05D006003 1.3e-208 729.6 382 93.5
AL283U10030 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 1.7e-208 729.2 382 93.2
AT2G30910 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 8.2e-208 726.9 382 93.2
A04p23600 Brassica napus HOM05D005041 ORTHO05D006003 1.7e-197 692.6 391 87.7
Aa31LG5G6010 Aethionema arabicum HOM05D005041 ORTHO05D006003 6.5e-197 690.6 412 83.3
AT2G31300 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 6.8e-194 680.6 361 92.8
C04p60050 Brassica napus HOM05D005041 ORTHO05D006003 4.1e-191 671.4 366 92.1
BolC4t27508H Brassica oleracea HOM05D005041 ORTHO05D006003 3.8e-189 664.8 376 89.4
Thhalv10017625m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 7.5e-185 650.6 328 96.6
Ciclev10015615m.g Citrus clementina HOM05D005041 ORTHO05D006003 1.3e-184 649.8 380 78.9
TWI63G0392 Tripterygium wilfordii HOM05D005041 ORTHO05D006003 2.2e-184 649.0 373 79.9
Atru.chr6.3564 Acer truncatum HOM05D005041 ORTHO05D006003 5.4e-183 644.4 377 78.0
GSVIVG01020787001 Vitis vinifera HOM05D005041 ORTHO05D006003 9.2e-183 643.7 373 79.1
Eucgr.K01189 Eucalyptus grandis HOM05D005041 ORTHO05D006003 2.0e-182 642.5 375 79.2
Thecc.01G157600 Theobroma cacao HOM05D005041 ORTHO05D006003 1.3e-181 639.8 372 80.1
PGR142G0148 Punica granatum HOM05D005041 ORTHO05D006003 1.7e-181 639.4 373 78.8
COL.COLO4_33676 Corchorus olitorius HOM05D005041 ORTHO05D006003 2.3e-181 639.0 372 79.8
BcaB06g28392 Brassica carinata HOM05D005041 ORTHO05D006003 8.6e-181 637.1 335 92.8
Lalb_Chr20g0114161 Lupinus albus HOM05D005041 ORTHO05D006003 1.1e-180 636.7 375 78.7
MELO3C031066.2 Cucumis melo HOM05D005041 ORTHO05D006003 1.6e-179 632.9 373 77.5
BraA04t17886Z Brassica rapa HOM05D005041 ORTHO05D006003 3.0e-178 628.6 372 84.7
CsaV3_6G037940 Cucumis sativus L. HOM05D005041 ORTHO05D006003 4.0e-178 628.2 375 77.6
Actinidia11183 Actinidia chinensis HOM05D005041 ORTHO05D006003 5.2e-178 627.9 373 76.4
Manes.02G087100 Manihot esculenta HOM05D005041 ORTHO05D006003 5.2e-178 627.9 373 77.5
Nn3g21016 Nelumbo nucifera HOM05D005041 ORTHO05D006003 5.2e-178 627.9 373 78.6
Sed0005186 Sechium edule HOM05D005041 ORTHO05D006003 5.2e-178 627.9 373 77.2
CSS0038733 Camellia sinensis var. sinensis HOM05D005041 ORTHO05D006003 1.5e-177 626.3 373 76.1
Dinv26517 Davidia involucrata HOM05D005041 ORTHO05D006003 2.0e-177 625.9 372 76.6
THA.LOC104826236 Tarenaya hassleriana HOM05D005041 ORTHO05D006003 1.1e-175 620.2 375 80.0
Gorai.011G123100 Gossypium raimondii HOM05D005041 ORTHO05D006003 2.4e-175 619.0 373 77.2
Gohir.D10G111500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 1.2e-174 616.7 373 76.9
Ah.01g004760 Amaranthus hybridus HOM05D005041 ORTHO05D006003 7.8e-174 614.0 372 75.8
Peaxi162Scf00828g00019 Petunia axillaris HOM05D005041 ORTHO05D006003 1.0e-173 613.6 377 75.1
MD09G1156800 Malus domestica HOM05D005041 ORTHO05D006003 2.3e-173 612.5 382 75.4
Cc05_g09060 Coffea canephora HOM05D005041 ORTHO05D006003 3.9e-173 611.7 378 74.1
Gohir.A10G154500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 3.9e-173 611.7 373 76.1
Hma1.2p1_0178F.1_g078240 Hydrangea macrophylla HOM05D005041 ORTHO05D006003 1.5e-172 609.8 369 76.2
EL10Ac9g21025 Beta vulgaris HOM05D005041 ORTHO05D006003 8.0e-171 604.0 372 75.8
Lsat_1_v5_gn_4_52360 Lactuca sativa HOM05D005041 ORTHO05D006003 1.8e-170 602.8 379 74.1
ECA234G0116 Erigeron canadensis HOM05D005041 ORTHO05D006003 2.3e-170 602.4 377 72.7
Migut.D00514 Erythranthe guttata HOM05D005041 ORTHO05D006003 3.1e-170 602.1 379 76.0
Solyc05g006470.4 Solanum lycopersicum HOM05D005041 ORTHO05D006003 5.2e-170 601.3 378 73.8
PSO541G3312 Papaver somniferum HOM05D005041 ORTHO05D006003 8.9e-170 600.5 372 73.7
DCAR_013571 Daucus carota HOM05D005041 ORTHO05D006003 1.2e-169 600.1 370 73.8
PSO675G8631 Papaver somniferum HOM05D005041 ORTHO05D006003 2.6e-169 599.0 372 73.7
HanXRQChr16g0518211 Helianthus annuus HOM05D005041 ORTHO05D006003 3.4e-169 598.6 377 74.3
Manes.01G129200 Manihot esculenta HOM05D005041 ORTHO05D006003 1.1e-167 593.6 373 72.9
ClCG09G022250 Citrullus lanatus HOM05D005041 ORTHO05D006003 3.2e-167 592.0 382 73.0
Sed0006581 Sechium edule HOM05D005041 ORTHO05D006003 5.4e-167 591.3 341 79.8
Aqoxy1G01950 Aquilegia oxysepala HOM05D005041 ORTHO05D006003 7.0e-167 590.9 373 74.8
MSTRG.15060 Avicennia marina HOM05D005041 ORTHO05D006003 1.2e-166 590.1 369 74.8
MBI06_g08528_MAGBIO Magnolia biondii HOM05D005041 ORTHO05D006003 2.7e-166 589.0 380 73.2
Os02g0817200 Oryza sativa ssp. japonica HOM05D005041 ORTHO05D006003 6.0e-166 587.8 370 73.0
Nitab4.5_0004310g0020 Nicotiana tabacum HOM05D005041 ORTHO05D006003 7.8e-166 587.4 414 67.4
TPR.G13543 Trifolium pratense HOM05D005041 ORTHO05D006003 1.7e-165 586.3 393 72.0
Zm00001eb258930 Zea mays HOM05D005041 ORTHO05D006003 2.8e-163 578.9 370 70.8
SGA_v2.0_scaffold1G00710 Striga asiatica HOM05D005041 ORTHO05D006003 1.4e-162 576.6 375 72.0
CDE10G0970 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 4.0e-162 575.1 369 72.6
SGA_v2.0_scaffold8G04656 Striga asiatica HOM05D005041 ORTHO05D006003 8.3e-160 567.4 375 70.7
vmacro12428 Vaccinium macrocarpon HOM05D005041 ORTHO05D006003 5.4e-159 564.7 378 71.4
FAN14G1924 Fragaria x ananassa HOM05D000054 ORTHO05D006003 9.2e-159 563.9 350 75.4
CiPaw.04G135200 Carya illinoinensis HOM05D005041 ORTHO05D006003 3.5e-158 562.0 373 70.8
Glyma.10G216300 Glycine max HOM05D005041 ORTHO05D006003 3.5e-158 562.0 335 77.9
TAR626G0242 Trochodendron aralioides HOM05D005041 ORTHO05D006003 7.3e-156 554.3 370 70.5
CDE10G1309 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 1.2e-155 553.5 369 72.1
unitig_37.g12857 Utricularia gibba HOM05D005041 ORTHO05D006003 1.2e-155 553.5 368 69.8
VMungo0540G2345 Vigna mungo HOM05D005041 ORTHO05D006003 8.1e-155 550.8 335 76.1
Cfa022568 Carpinus fangiana HOM05D005041 ORTHO05D006003 4.0e-154 548.5 374 69.5
FAN02G2360 Fragaria x ananassa HOM05D000054 ORTHO05D006003 4.4e-153 545.0 377 69.2
Dinv06276 Davidia involucrata HOM05D005041 ORTHO05D006003 3.8e-152 542.0 321 77.9
Prupe.3G170000 Prunus persica HOM05D005041 ORTHO05D006003 1.4e-151 540.0 373 68.6
Haze_13460 Corylus avellana HOM05D005041 ORTHO05D006003 4.1e-151 538.5 382 67.5
Potri.014G141700 Populus trichocarpa HOM05D005041 ORTHO05D006003 2.1e-150 536.2 377 67.6
QL08p043305 Quercus lobata HOM05D005041 ORTHO05D006003 6.0e-150 534.6 373 67.8
FAN09G1464 Fragaria x ananassa HOM05D000054 ORTHO05D006003 5.1e-149 531.6 373 67.6
MD17G1143300 Malus domestica HOM05D005041 ORTHO05D006003 4.3e-148 528.5 373 67.3
Medtr3g049070 Medicago truncatula HOM05D005041 ORTHO05D006003 4.7e-147 525.0 375 67.2
RcHm_v2.0_Chr2g0150441 Rosa chinensis HOM05D005041 ORTHO05D006003 1.1e-146 523.9 373 66.2
Ca_14633_v3 Cicer arietinum L. HOM05D005041 ORTHO05D006003 1.8e-146 523.1 375 67.2
Lju124A34T49 Lonicera japonica HOM05D005041 ORTHO05D006003 1.5e-145 520.0 281 83.6
HPP92_025809 Vanilla planifolia HOM05D005041 ORTHO05D006003 4.4e-145 518.5 370 66.2
Hund00824 Selenicereus undatus HOM05D005041 ORTHO05D006003 2.2e-144 516.2 368 66.0
CANSAT11G1484 Cannabis sativa HOM05D005041 ORTHO05D006003 4.2e-143 511.9 374 65.5
Glyma.08G311700 Glycine max HOM05D005041 ORTHO05D006003 1.2e-142 510.4 375 65.9
Glyma.18G103800 Glycine max HOM05D005041 ORTHO05D006003 3.5e-142 508.8 375 65.1
Lj6g0019726 Lotus japonicus HOM05D005041 ORTHO05D006003 3.5e-142 508.8 375 65.6
Psat5g186840 Pisum sativum HOM05D005041 ORTHO05D006003 3.5e-142 508.8 375 65.3
arahy.Tifrunner.gnm1.ann1.5LHA9P Arachis hypogaea HOM05D005041 ORTHO05D006003 1.9e-140 503.1 375 65.3
arahy.Tifrunner.gnm1.ann1.RC242R Arachis hypogaea HOM05D005041 ORTHO05D006003 1.9e-140 503.1 375 65.3
Phvul.005G127400 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 2.5e-140 502.7 375 64.5
VMungo1080G0034 Vigna mungo HOM05D005041 ORTHO05D006003 2.1e-139 499.6 375 64.0
Nitab4.5_0002312g0010 Nicotiana tabacum HOM05D005041 ORTHO05D006003 1.2e-137 493.8 375 62.7
Cpa.g.sc50.61 Carica papaya HOM05D005041 ORTHO05D006003 9.9e-137 490.7 253 88.1
SMO364G0091 Selaginella moellendorffii HOM05D005041 ORTHO05D006003 3.8e-136 488.8 379 60.2
Lj2A374G38 Lonicera japonica HOM05D005041 ORTHO05D006003 1.9e-135 486.5 349 69.3
Thhalv10017010m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 4.2e-135 485.3 383 68.1
Sc12g0003800 Simmondsia chinensis HOM05D005041 ORTHO05D006003 3.5e-134 482.3 377 61.5
Phvul.006G036500 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 1.4e-130 470.3 375 61.3
Sopen05g002420 Solanum pennellii HOM05D005041 ORTHO05D006003 4.9e-128 461.8 257 81.7
AagrBONN_evm.TU.Sc2ySwM_228.2899 Anthoceros agrestis HOM05D005041 ORTHO05D006003 1.2e-126 457.2 366 60.1
Mapoly0116s0052 Marchantia polymorpha HOM05D005041 ORTHO05D006003 1.5e-124 450.3 387 55.6
Duzib187G1062 Durio zibethinus HOM05D005041 ORTHO05D006003 9.6e-124 447.6 373 60.9
Zm00001eb191400 Zea mays HOM05D005041 ORTHO05D006003 2.4e-122 443.0 253 77.9
FvH4_6g37551 Fragaria vesca HOM05D005041 ORTHO05D006003 2.9e-120 436.0 281 72.6
Mapoly0090s0056 Marchantia polymorpha HOM05D005041 ORTHO05D006003 6.5e-120 434.9 387 53.7
Pp3c19_12930 Physcomitrium patens HOM05D005041 ORTHO05D006003 8.4e-120 434.5 386 54.4
Pp3c18_4810 Physcomitrium patens HOM05D005041 ORTHO05D006003 5.1e-117 425.2 382 53.7
AUR62031794 Chenopodium quinoa HOM05D005041 ORTHO05D006003 4.1e-106 389.0 306 64.4
ATR0787G051 Amborella trichopoda HOM05D005041 ORTHO05D006003 1.2e-102 377.5 224 76.8
AUR62024003 Chenopodium quinoa HOM05D005041 ORTHO05D006003 1.6e-94 350.5 309 56.3
CBR_g18699 Chara braunii HOM05D005041 ORTHO05D006003 2.8e-83 313.2 532 37.0
CARHR124910 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.3e-80 304.3 147 95.9
CARHR124390 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.2e-78 297.7 144 95.1
Nn6g34435 Nelumbo nucifera HOM05D005041 ORTHO05D006003 1.2e-70 271.2 218 61.9
Sabra14G0106900 Salix brachista HOM05D005041 ORTHO05D006003 1.8e-69 267.3 218 62.4
SalBow4G0308 Salvia bowleyana HOM05D005041 ORTHO05D006003 1.8e-69 267.3 213 63.4
Sopen05g002410 Solanum pennellii HOM05D005041 ORTHO05D006003 3.4e-68 263.1 271 50.2
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 3.9e-64 249.6 370 36.8
SHI23137 Sapria himalayana HOM05D005041 ORTHO05D006003 1.5e-55 221.1 134 73.9
Oeu032123.1 Olea europaea HOM05D005041 ORTHO05D006003 2.1e-54 217.2 146 70.5
Actinidia12824 Actinidia chinensis HOM05D005041 ORTHO05D006003 5.2e-53 212.6 144 68.8
TAR383G0169 Trochodendron aralioides HOM05D005041 ORTHO05D006003 7.5e-44 182.2 112 71.4
Cre16.g648100 Chlamydomonas reinhardtii HOM05D005041 ORTHO05D006003 1.2e-41 174.9 297 32.7
SEGI_31471 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 1.7e-40 171.0 139 58.3
SEGI_36522 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 3.8e-35 153.3 92 73.9
Haze_27289 Corylus avellana HOM05D005041 ORTHO05D006003 9.6e-31 138.7 281 29.9
Duzib147G0812 Durio zibethinus HOM05D005041 ORTHO05D006003 4.6e-25 119.8 146 47.3
BolC2t10705H Brassica oleracea HOM05D005041 ORTHO05D006003 2.3e-24 117.5 57 89.5
CARHR285180 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.6e-22 111.3 52 94.2
Duzib147G0224 Durio zibethinus HOM05D005041 ORTHO05D006003 6.2e-22 109.4 59 83.1
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 8.1e-22 109.0 66 72.7
CARHR059870 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.9e-15 87.8 57 77.2
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 6.2e-14 82.8 78 53.8
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 4.5e-12 76.6 48 77.1
Glyma.02G162651 Glycine max HOM05D005041 ORTHO05D006003 2.1e-06 57.8 37 64.9


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