Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p43000 Brassica napus HOM05D000278 ORTHO05D018740 7.9e-39 163.3 83 100.0
A03p55410 Brassica napus HOM05D000278 ORTHO05D018740 6.7e-38 160.2 82 97.6
A04p31600 Brassica napus HOM05D000278 ORTHO05D018740 6.7e-38 160.2 82 97.6
BraA08t32545Z Brassica rapa HOM05D000278 ORTHO05D018740 6.7e-38 160.2 82 97.6
BraA04t18617Z Brassica rapa HOM05D000278 ORTHO05D018740 5.9e-34 147.1 85 90.6
BolC3t20149H Brassica oleracea HOM05D000278 ORTHO05D018740 2.6e-21 105.1 60 88.3
BcaB07g32161 Brassica carinata HOM05D000142 ORTHO05D018740 1.8e-11 72.4 66 63.6
Sp4g19540 Schrenkiella parvula HOM05D000142 ORTHO05D001253 2.4e-11 72.0 66 63.6
Thhalv10017023m.g Eutrema salsugineum HOM05D000142 ORTHO05D001253 3.5e-10 68.2 66 60.6
Aa31LG5G22550 Aethionema arabicum HOM05D000142 ORTHO05D001253 7.7e-10 67.0 66 57.6
BraA04t18322Z Brassica rapa HOM05D000142 ORTHO05D001253 8.5e-09 63.5 49 69.4
A03p20540 Brassica napus HOM05D000142 ORTHO05D001253 1.9e-08 62.4 45 71.1
BraA03t11297Z Brassica rapa HOM05D000142 ORTHO05D001253 1.9e-08 62.4 45 71.1
Carub.0004s1912 Capsella rubella HOM05D000142 ORTHO05D001253 3.2e-08 61.6 66 56.1
AL4G33590 Arabidopsis lyrata HOM05D000142 ORTHO05D001253 7.2e-08 60.5 43 72.1
A04p28430 Brassica napus HOM05D000142 ORTHO05D001253 7.2e-08 60.5 41 75.6
BolC4t28076H Brassica oleracea HOM05D000142 ORTHO05D001253 9.4e-08 60.1 49 63.3
CARHR132370 Cardamine hirsuta HOM05D000142 ORTHO05D001253 9.4e-08 60.1 43 72.1
C04p65740 Brassica napus HOM05D000142 ORTHO05D001253 1.2e-07 59.7 41 75.6
C03p24140 Brassica napus HOM05D000142 ORTHO05D001253 2.7e-07 58.5 66 56.1
BolC3t14807H Brassica oleracea HOM05D000142 ORTHO05D001253 2.7e-07 58.5 66 56.1
AT2G37220 Arabidopsis thaliana HOM05D000142 ORTHO05D001253 4.7e-07 57.8 43 69.8
BcaNung06608 Brassica carinata HOM05D000142 ORTHO05D001253 6.1e-07 57.4 66 53.0
Aa31LG10G8640 Aethionema arabicum HOM05D000142 ORTHO05D001253 4.0e-06 54.7 35 71.4
Carub.0005s2003 Capsella rubella HOM05D000142 ORTHO05D001253 5.2e-06 54.3 33 78.8


User provided reference genes

Program Settings