Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p11290 Brassica napus HOM05D001835 ORTHO05D021849 6.7e-57 223.8 113 100.0
A01p11260 Brassica napus HOM05D001835 ORTHO05D021849 1.4e-54 216.1 113 96.5
BraA01t01071Z Brassica rapa HOM05D001835 ORTHO05D021849 5.3e-54 214.2 113 95.6
BcaC09g51420 Brassica carinata HOM05D001835 ORTHO05D021849 3.3e-48 194.9 113 85.8
C01p13290 Brassica napus HOM05D001835 ORTHO05D021849 1.7e-47 192.6 113 85.0
BolC1t01305H Brassica oleracea HOM05D001835 ORTHO05D021849 7.0e-46 187.2 113 84.1
Cpa.g.sc13.66 Carica papaya HOM05D001835 ORTHO05D001899 3.4e-08 62.0 76 43.4
RcHm_v2.0_Chr2g0163281 Rosa chinensis HOM05D001835 ORTHO05D001899 7.5e-08 60.8 82 37.8
CDE03G0007 Ceratophyllum demersum HOM05D001835 ORTHO05D001899 1.7e-07 59.7 110 35.5
CBR_g36473 Chara braunii HOM05D001835 ORTHO05D001899 2.9e-07 58.9 109 34.9
Glyma.02G101700 Glycine max HOM05D001835 ORTHO05D001899 2.9e-07 58.9 92 37.0
Phvul.003G025700 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 2.9e-07 58.9 112 33.9
CDE04G0792 Ceratophyllum demersum HOM05D001835 ORTHO05D001899 3.7e-07 58.5 92 35.9
Duzib068G1023 Durio zibethinus HOM05D001835 ORTHO05D001899 3.7e-07 58.5 106 32.1
FAN09G4354 Fragaria x ananassa HOM05D001835 ORTHO05D001899 6.4e-07 57.8 80 36.2
Glyma.02G101500 Glycine max HOM05D001835 ORTHO05D001899 8.3e-07 57.4 92 35.9
Glyma.04G134900 Glycine max HOM05D001835 ORTHO05D001899 8.3e-07 57.4 92 35.9
Pp3c8_3020 Physcomitrium patens HOM05D001835 ORTHO05D001899 8.3e-07 57.4 71 42.3
Pp3c8_3026 Physcomitrium patens HOM05D001835 ORTHO05D001899 8.3e-07 57.4 71 42.3
CiPaw.12G055600 Carya illinoinensis HOM05D001835 ORTHO05D001899 1.1e-06 57.0 78 37.2
A09p21650 Brassica napus HOM05D001835 ORTHO05D001899 1.4e-06 56.6 81 37.0
Duzib205G1377 Durio zibethinus HOM05D001835 ORTHO05D001899 1.4e-06 56.6 111 30.6
FAN14G0166 Fragaria x ananassa HOM05D001835 ORTHO05D001899 1.4e-06 56.6 52 48.1
Oeu046771.1 Olea europaea HOM05D001835 ORTHO05D001899 1.4e-06 56.6 82 36.6
Phvul.003G025600 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 1.4e-06 56.6 92 35.9
Pp3c3_32510 Physcomitrium patens HOM05D001835 ORTHO05D001899 1.4e-06 56.6 71 42.3
Pp3c8_3120 Physcomitrium patens HOM05D001835 ORTHO05D001899 1.4e-06 56.6 71 42.3
VMungo1215G2398 Vigna mungo HOM05D001835 ORTHO05D001899 1.4e-06 56.6 92 35.9
BraA09t37767Z Brassica rapa HOM05D001835 ORTHO05D001899 1.9e-06 56.2 81 37.0
CSS0007567 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 1.9e-06 56.2 91 34.1
Glyma.01G089900 Glycine max HOM05D001835 ORTHO05D001899 1.9e-06 56.2 92 35.9
Lj2g0003751 Lotus japonicus HOM05D001835 ORTHO05D001899 1.9e-06 56.2 52 44.2
Atru.chr8.2612 Acer truncatum HOM05D001835 ORTHO05D001899 2.4e-06 55.8 106 34.0
MSTRG.13499 Avicennia marina HOM05D001835 ORTHO05D001899 2.4e-06 55.8 104 34.6
Lalb_Chr10g0099641 Lupinus albus HOM05D001835 ORTHO05D001899 2.4e-06 55.8 91 34.1
Manes.06G073900 Manihot esculenta HOM05D001835 ORTHO05D001899 2.4e-06 55.8 91 35.2
Potri.017G111500 Populus trichocarpa HOM05D001835 ORTHO05D001899 2.4e-06 55.8 82 34.1
Actinidia13684 Actinidia chinensis HOM05D001835 ORTHO05D001899 3.2e-06 55.5 111 30.6
A02p29040 Brassica napus HOM05D001835 ORTHO05D001899 3.2e-06 55.5 71 36.6
BraA02t07936Z Brassica rapa HOM05D001835 ORTHO05D001899 3.2e-06 55.5 71 36.6
Ciclev10011410m.g Citrus clementina HOM05D001835 ORTHO05D001899 3.2e-06 55.5 79 36.7
DCAR_026268 Daucus carota HOM05D001835 ORTHO05D001899 3.2e-06 55.5 52 48.1
Lalb_Chr17g0341831 Lupinus albus HOM05D001835 ORTHO05D001899 3.2e-06 55.5 91 34.1
MCO04G472 Micromonas commoda HOM05D001835 ORTHO05D001899 3.2e-06 55.5 80 38.8
Peaxi162Scf00367g00726 Petunia axillaris HOM05D001835 ORTHO05D001899 3.2e-06 55.5 92 34.8
Rhsim09G0113800 Rhododendron simsii HOM05D001835 ORTHO05D001899 3.2e-06 55.5 91 33.0
TPR.G2658 Trifolium pratense HOM05D001835 ORTHO05D001899 3.2e-06 55.5 92 35.9
TWI75G0523 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 3.2e-06 55.5 104 30.8
GSVIVG01036888001 Vitis vinifera HOM05D001835 ORTHO05D001899 3.2e-06 55.5 79 35.4
BcaB07g30460 Brassica carinata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 71 38.0
BcaC03g16741 Brassica carinata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 71 38.0
FAN02G1426 Fragaria x ananassa HOM05D001835 ORTHO05D001899 4.1e-06 55.1 80 35.0
Gohir.A03G097200 Gossypium hirsutum HOM05D001835 ORTHO05D001899 4.1e-06 55.1 85 36.5
MBI16_g23747_MAGBIO Magnolia biondii HOM05D001835 ORTHO05D001899 4.1e-06 55.1 82 36.6
Potri.008G114900 Populus trichocarpa HOM05D001835 ORTHO05D001899 4.1e-06 55.1 85 37.6
GSVIVG01011971001 Vitis vinifera HOM05D001835 ORTHO05D001899 4.1e-06 55.1 91 33.0
Atru.chr8.801 Acer truncatum HOM05D001835 ORTHO05D001899 5.4e-06 54.7 84 35.7
Actinidia16606 Actinidia chinensis HOM05D001835 ORTHO05D001899 5.4e-06 54.7 91 33.0
arahy.Tifrunner.gnm1.ann1.CA2BVZ Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 52 48.1
arahy.Tifrunner.gnm1.ann1.E2PDKD Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 52 48.1
C03p72720 Brassica napus HOM05D001835 ORTHO05D001899 5.4e-06 54.7 89 33.7
BolC3t19570H Brassica oleracea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 89 33.7
Nitab4.5_0009780g0010 Nicotiana tabacum HOM05D001835 ORTHO05D001899 5.4e-06 54.7 92 33.7
Prupe.1G303800 Prunus persica HOM05D001835 ORTHO05D001899 5.4e-06 54.7 85 32.9
PGR102G0475 Punica granatum HOM05D001835 ORTHO05D001899 5.4e-06 54.7 86 36.0
Sabra01G0179800 Salix brachista HOM05D001835 ORTHO05D001899 5.4e-06 54.7 71 39.4
SMO174G0068 Selaginella moellendorffii HOM05D001835 ORTHO05D001899 5.4e-06 54.7 71 36.6
Solyc05g009980.4 Solanum lycopersicum HOM05D001835 ORTHO05D001899 5.4e-06 54.7 82 35.4
Sopen05g005790 Solanum pennellii HOM05D001835 ORTHO05D001899 5.4e-06 54.7 82 35.4
PGSC0003DMG400000802 Solanum tuberosum HOM05D001835 ORTHO05D001899 5.4e-06 54.7 91 34.1
TWI31G1161 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 5.4e-06 54.7 105 30.5
Aqoxy3G03876 Aquilegia oxysepala HOM05D001835 ORTHO05D001899 7.1e-06 54.3 82 35.4
AL1G39670 Arabidopsis lyrata HOM05D001835 ORTHO05D001899 7.1e-06 54.3 85 32.9
CSS0008982 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 7.1e-06 54.3 108 29.6
CANSAT64G2298 Cannabis sativa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 83 34.9
Carub.0001s2486 Capsella rubella HOM05D001835 ORTHO05D001899 7.1e-06 54.3 85 32.9
Carub.0008s0280 Capsella rubella HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 35.9
Migut.L01105 Erythranthe guttata HOM05D001835 ORTHO05D001899 7.1e-06 54.3 82 35.4
FAN05G5321 Fragaria x ananassa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 80 35.0
Nn3g17682 Nelumbo nucifera HOM05D001835 ORTHO05D001899 7.1e-06 54.3 82 34.1
Thecc.03G026900 Theobroma cacao HOM05D001835 ORTHO05D001899 7.1e-06 54.3 72 37.5
Thecc.03G320500 Theobroma cacao HOM05D001835 ORTHO05D001899 7.1e-06 54.3 91 33.0
AagrBONN_evm.TU.Sc2ySwM_362.1790 Anthoceros agrestis HOM05D001835 ORTHO05D001899 9.2e-06 53.9 52 50.0
BcaB03g12085 Brassica carinata HOM05D001835 ORTHO05D001899 9.2e-06 53.9 77 37.7
BcaB07g30895 Brassica carinata HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 36.6
BcaC05g26648 Brassica carinata HOM05D001835 ORTHO05D001899 9.2e-06 53.9 77 37.7
A08p27140 Brassica napus HOM05D001835 ORTHO05D001899 9.2e-06 53.9 82 34.1
C02p46140 Brassica napus HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 38.0
BolC2t10671H Brassica oleracea HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 38.0
BraA07t29046Z Brassica rapa HOM05D001835 ORTHO05D001899 9.2e-06 53.9 82 34.1
BraA08t34659Z Brassica rapa HOM05D001835 ORTHO05D001899 9.2e-06 53.9 82 34.1
CAN.G587.75 Capsicum annuum HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 38.5
CAN.G998.8 Capsicum annuum HOM05D001835 ORTHO05D001899 9.2e-06 53.9 52 48.1
Ca_05095_v3 Cicer arietinum L. HOM05D001835 ORTHO05D001899 9.2e-06 53.9 91 34.1
Thhalv10000836m.g Eutrema salsugineum HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 38.0
Gorai.005G137500 Gossypium raimondii HOM05D001835 ORTHO05D001899 9.2e-06 53.9 82 35.4
Nn1g09336 Nelumbo nucifera HOM05D001835 ORTHO05D001899 9.2e-06 53.9 105 34.3
Peaxi162Scf00550g00444 Petunia axillaris HOM05D001835 ORTHO05D001899 9.2e-06 53.9 93 33.3
Prupe.5G013500 Prunus persica HOM05D001835 ORTHO05D001899 9.2e-06 53.9 79 35.4
Thecc.04G139200 Theobroma cacao HOM05D001835 ORTHO05D001899 9.2e-06 53.9 82 34.1
TWI60G1275 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 9.2e-06 53.9 107 30.8


User provided reference genes

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