Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p11260 Brassica napus HOM05D001835 ORTHO05D021849 2.3e-57 225.3 113 100.0
BraA01t01071Z Brassica rapa HOM05D001835 ORTHO05D021849 8.8e-57 223.4 113 99.1
A01p11290 Brassica napus HOM05D001835 ORTHO05D021849 8.2e-55 216.9 113 96.5
BcaC09g51420 Brassica carinata HOM05D001835 ORTHO05D021849 2.6e-48 195.3 113 86.7
C01p13290 Brassica napus HOM05D001835 ORTHO05D021849 1.3e-47 193.0 113 85.8
BolC1t01305H Brassica oleracea HOM05D001835 ORTHO05D021849 5.3e-46 187.6 113 85.0
CDE03G0007 Ceratophyllum demersum HOM05D001835 ORTHO05D001899 2.0e-08 62.8 111 36.0
Glyma.02G101700 Glycine max HOM05D001835 ORTHO05D001899 2.0e-08 62.8 93 38.7
Phvul.003G025700 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 2.0e-08 62.8 113 35.4
Cpa.g.sc13.66 Carica papaya HOM05D001835 ORTHO05D001899 2.6e-08 62.4 76 43.4
CDE04G0792 Ceratophyllum demersum HOM05D001835 ORTHO05D001899 2.6e-08 62.4 93 37.6
RcHm_v2.0_Chr2g0163281 Rosa chinensis HOM05D001835 ORTHO05D001899 3.4e-08 62.0 89 38.2
Duzib068G1023 Durio zibethinus HOM05D001835 ORTHO05D001899 4.4e-08 61.6 108 33.3
FAN14G0166 Fragaria x ananassa HOM05D001835 ORTHO05D001899 5.8e-08 61.2 87 37.9
Glyma.02G101500 Glycine max HOM05D001835 ORTHO05D001899 5.8e-08 61.2 93 37.6
Glyma.04G134900 Glycine max HOM05D001835 ORTHO05D001899 5.8e-08 61.2 93 37.6
Phvul.003G025600 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 9.9e-08 60.5 93 37.6
VMungo1215G2398 Vigna mungo HOM05D001835 ORTHO05D001899 9.9e-08 60.5 93 37.6
Glyma.01G089900 Glycine max HOM05D001835 ORTHO05D001899 1.3e-07 60.1 93 37.6
CSS0007567 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 1.7e-07 59.7 93 35.5
Duzib205G1377 Durio zibethinus HOM05D001835 ORTHO05D001899 1.7e-07 59.7 113 31.9
CBR_g36473 Chara braunii HOM05D001835 ORTHO05D001899 2.2e-07 59.3 109 34.9
Lalb_Chr10g0099641 Lupinus albus HOM05D001835 ORTHO05D001899 2.2e-07 59.3 93 35.5
Manes.06G073900 Manihot esculenta HOM05D001835 ORTHO05D001899 2.2e-07 59.3 93 36.6
Peaxi162Scf00367g00726 Petunia axillaris HOM05D001835 ORTHO05D001899 2.2e-07 59.3 93 36.6
TPR.G2658 Trifolium pratense HOM05D001835 ORTHO05D001899 2.2e-07 59.3 93 37.6
Actinidia13684 Actinidia chinensis HOM05D001835 ORTHO05D001899 2.9e-07 58.9 113 31.9
Lj2g0003751 Lotus japonicus HOM05D001835 ORTHO05D001899 2.9e-07 58.9 82 36.6
Lalb_Chr17g0341831 Lupinus albus HOM05D001835 ORTHO05D001899 2.9e-07 58.9 93 35.5
Potri.017G111500 Populus trichocarpa HOM05D001835 ORTHO05D001899 2.9e-07 58.9 93 34.4
FAN09G4354 Fragaria x ananassa HOM05D001835 ORTHO05D001899 3.7e-07 58.5 87 36.8
Nitab4.5_0009780g0010 Nicotiana tabacum HOM05D001835 ORTHO05D001899 3.7e-07 58.5 93 35.5
Rhsim09G0113800 Rhododendron simsii HOM05D001835 ORTHO05D001899 3.7e-07 58.5 93 34.4
TWI31G1161 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 3.7e-07 58.5 106 32.1
TWI75G0523 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 3.7e-07 58.5 106 32.1
GSVIVG01011971001 Vitis vinifera HOM05D001835 ORTHO05D001899 3.7e-07 58.5 93 34.4
Actinidia16606 Actinidia chinensis HOM05D001835 ORTHO05D001899 4.9e-07 58.2 93 34.4
CiPaw.12G055600 Carya illinoinensis HOM05D001835 ORTHO05D001899 4.9e-07 58.2 85 37.6
Oeu046771.1 Olea europaea HOM05D001835 ORTHO05D001899 4.9e-07 58.2 89 37.1
Pp3c8_3020 Physcomitrium patens HOM05D001835 ORTHO05D001899 6.4e-07 57.8 71 42.3
Pp3c8_3026 Physcomitrium patens HOM05D001835 ORTHO05D001899 6.4e-07 57.8 71 42.3
PGSC0003DMG400000802 Solanum tuberosum HOM05D001835 ORTHO05D001899 6.4e-07 57.8 93 35.5
Ca_05095_v3 Cicer arietinum L. HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 35.5
Cc11_g10750 Coffea canephora HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 34.4
Thhalv10007133m.g Eutrema salsugineum HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 35.5
Lj2g0004801 Lotus japonicus HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 35.5
Manes.14G096300 Manihot esculenta HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 35.5
Nitab4.5_0004705g0070 Nicotiana tabacum HOM05D001835 ORTHO05D001899 8.3e-07 57.4 91 35.2
Thecc.03G320500 Theobroma cacao HOM05D001835 ORTHO05D001899 8.3e-07 57.4 93 34.4
MSTRG.13499 Avicennia marina HOM05D001835 ORTHO05D001899 1.1e-06 57.0 111 35.1
Lalb_Chr21g0313381 Lupinus albus HOM05D001835 ORTHO05D001899 1.1e-06 57.0 115 32.2
Pp3c3_32510 Physcomitrium patens HOM05D001835 ORTHO05D001899 1.1e-06 57.0 71 42.3
Pp3c8_3120 Physcomitrium patens HOM05D001835 ORTHO05D001899 1.1e-06 57.0 71 42.3
Potri.004G104000 Populus trichocarpa HOM05D001835 ORTHO05D001899 1.1e-06 57.0 93 33.3
A09p21650 Brassica napus HOM05D001835 ORTHO05D001899 1.4e-06 56.6 88 37.5
COL.COLO4_16746 Corchorus olitorius HOM05D001835 ORTHO05D001899 1.4e-06 56.6 93 33.3
DCAR_026268 Daucus carota HOM05D001835 ORTHO05D001899 1.4e-06 56.6 78 39.7
MD13G1048400 Malus domestica HOM05D001835 ORTHO05D001899 1.4e-06 56.6 93 34.4
MD16G1049700 Malus domestica HOM05D001835 ORTHO05D001899 1.4e-06 56.6 93 34.4
RcHm_v2.0_Chr4g0436041 Rosa chinensis HOM05D001835 ORTHO05D001899 1.4e-06 56.6 93 34.4
TAR629G1157 Trochodendron aralioides HOM05D001835 ORTHO05D001899 1.4e-06 56.6 93 33.3
Atru.chr8.2612 Acer truncatum HOM05D001835 ORTHO05D001899 1.9e-06 56.2 113 34.5
arahy.Tifrunner.gnm1.ann1.CA2BVZ Arachis hypogaea HOM05D001835 ORTHO05D001899 1.9e-06 56.2 111 34.2
arahy.Tifrunner.gnm1.ann1.E2PDKD Arachis hypogaea HOM05D001835 ORTHO05D001899 1.9e-06 56.2 111 34.2
BraA09t37767Z Brassica rapa HOM05D001835 ORTHO05D001899 1.9e-06 56.2 88 37.5
COL.COLO4_16202 Corchorus olitorius HOM05D001835 ORTHO05D001899 1.9e-06 56.2 93 34.4
MBI16_g23747_MAGBIO Magnolia biondii HOM05D001835 ORTHO05D001899 1.9e-06 56.2 89 37.1
Potri.010G131400 Populus trichocarpa HOM05D001835 ORTHO05D001899 1.9e-06 56.2 93 35.5
GSVIVG01036888001 Vitis vinifera HOM05D001835 ORTHO05D001899 1.9e-06 56.2 86 36.0
Atru.chr8.801 Acer truncatum HOM05D001835 ORTHO05D001899 2.4e-06 55.8 91 36.3
CSS0008982 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 2.4e-06 55.8 110 30.0
Cfa018648 Carpinus fangiana HOM05D001835 ORTHO05D001899 2.4e-06 55.8 89 32.6
CiPaw.15G002300 Carya illinoinensis HOM05D001835 ORTHO05D001899 2.4e-06 55.8 93 33.3
Ciclev10011410m.g Citrus clementina HOM05D001835 ORTHO05D001899 2.4e-06 55.8 86 37.2
Migut.L01105 Erythranthe guttata HOM05D001835 ORTHO05D001899 2.4e-06 55.8 89 36.0
FAN02G1426 Fragaria x ananassa HOM05D001835 ORTHO05D001899 2.4e-06 55.8 87 35.6
Gohir.A03G097200 Gossypium hirsutum HOM05D001835 ORTHO05D001899 2.4e-06 55.8 92 37.0
Lalb_Chr06g0170271 Lupinus albus HOM05D001835 ORTHO05D001899 2.4e-06 55.8 93 34.4
Potri.008G114900 Populus trichocarpa HOM05D001835 ORTHO05D001899 2.4e-06 55.8 92 38.0
Prupe.1G303800 Prunus persica HOM05D001835 ORTHO05D001899 2.4e-06 55.8 92 33.7
Sopen08g023900 Solanum pennellii HOM05D001835 ORTHO05D001899 2.4e-06 55.8 116 31.0
Aqoxy3G03876 Aquilegia oxysepala HOM05D001835 ORTHO05D001899 3.2e-06 55.5 89 36.0
A02p29040 Brassica napus HOM05D001835 ORTHO05D001899 3.2e-06 55.5 78 37.2
BraA02t07936Z Brassica rapa HOM05D001835 ORTHO05D001899 3.2e-06 55.5 78 37.2
CAN.G998.8 Capsicum annuum HOM05D001835 ORTHO05D001899 3.2e-06 55.5 78 39.7
Haze_17420 Corylus avellana HOM05D001835 ORTHO05D001899 3.2e-06 55.5 89 32.6
Dinv16522 Davidia involucrata HOM05D001835 ORTHO05D001899 3.2e-06 55.5 93 33.3
FAN05G5321 Fragaria x ananassa HOM05D001835 ORTHO05D001899 3.2e-06 55.5 87 35.6
Gohir.A12G172300 Gossypium hirsutum HOM05D001835 ORTHO05D001899 3.2e-06 55.5 93 34.4
Gohir.D12G174700 Gossypium hirsutum HOM05D001835 ORTHO05D001899 3.2e-06 55.5 93 34.4
Gorai.008G187400 Gossypium raimondii HOM05D001835 ORTHO05D001899 3.2e-06 55.5 93 34.4
Nn3g17682 Nelumbo nucifera HOM05D001835 ORTHO05D001899 3.2e-06 55.5 89 34.8
PGR102G0475 Punica granatum HOM05D001835 ORTHO05D001899 3.2e-06 55.5 93 36.6
Solyc05g009980.4 Solanum lycopersicum HOM05D001835 ORTHO05D001899 3.2e-06 55.5 89 36.0
Sopen05g005790 Solanum pennellii HOM05D001835 ORTHO05D001899 3.2e-06 55.5 89 36.0
TWI79G0885 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 3.2e-06 55.5 106 31.1
ATR0568G041 Amborella trichopoda HOM05D001835 ORTHO05D001899 4.1e-06 55.1 78 38.5
ATR0598G050 Amborella trichopoda HOM05D001835 ORTHO05D001899 4.1e-06 55.1 97 36.1
AL1G39670 Arabidopsis lyrata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 92 33.7
MSTRG.2268 Avicennia marina HOM05D001835 ORTHO05D001899 4.1e-06 55.1 89 34.8
BcaB07g30460 Brassica carinata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 78 38.5
BcaC03g16741 Brassica carinata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 78 38.5
C03p72720 Brassica napus HOM05D001835 ORTHO05D001899 4.1e-06 55.1 96 34.4
BolC3t19570H Brassica oleracea HOM05D001835 ORTHO05D001899 4.1e-06 55.1 96 34.4
CANSAT64G2298 Cannabis sativa HOM05D001835 ORTHO05D001899 4.1e-06 55.1 90 35.6
Carub.0001s2486 Capsella rubella HOM05D001835 ORTHO05D001899 4.1e-06 55.1 92 33.7
CiPaw.04G039800 Carya illinoinensis HOM05D001835 ORTHO05D001899 4.1e-06 55.1 78 37.2
Gorai.005G137500 Gossypium raimondii HOM05D001835 ORTHO05D001899 4.1e-06 55.1 89 36.0
QL01p000964 Quercus lobata HOM05D001835 ORTHO05D001899 4.1e-06 55.1 93 33.3
Sed0014405 Sechium edule HOM05D001835 ORTHO05D001899 4.1e-06 55.1 93 32.3
SMO174G0068 Selaginella moellendorffii HOM05D001835 ORTHO05D001899 4.1e-06 55.1 71 36.6
Thecc.04G139200 Theobroma cacao HOM05D001835 ORTHO05D001899 4.1e-06 55.1 89 34.8
TAR629G2673 Trochodendron aralioides HOM05D001835 ORTHO05D001899 4.1e-06 55.1 93 35.5
arahy.Tifrunner.gnm1.ann1.3FFR1F Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 34.4
arahy.Tifrunner.gnm1.ann1.7L3EKI Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 34.4
arahy.Tifrunner.gnm1.ann1.AG49XH Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 34.4
arahy.Tifrunner.gnm1.ann1.L2NYG1 Arachis hypogaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 34.4
BcaNung01787 Brassica carinata HOM05D001835 ORTHO05D091903 5.4e-06 54.7 40 70.0
Carub.0008s0280 Capsella rubella HOM05D001835 ORTHO05D001899 5.4e-06 54.7 85 36.5
Ciclev10011356m.g Citrus clementina HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 32.3
Dinv05806 Davidia involucrata HOM05D001835 ORTHO05D001899 5.4e-06 54.7 78 38.5
Migut.E00289 Erythranthe guttata HOM05D001835 ORTHO05D001899 5.4e-06 54.7 78 38.5
FAN17G0213 Fragaria x ananassa HOM05D001835 ORTHO05D001899 5.4e-06 54.7 108 33.3
Hma1.2p1_1207F.1_g267025 Hydrangea macrophylla HOM05D001835 ORTHO05D001899 5.4e-06 54.7 78 38.5
MCO04G472 Micromonas commoda HOM05D001835 ORTHO05D001899 5.4e-06 54.7 80 37.5
Nn1g09336 Nelumbo nucifera HOM05D001835 ORTHO05D001899 5.4e-06 54.7 112 34.8
Oeu018295.1 Olea europaea HOM05D001835 ORTHO05D001899 5.4e-06 54.7 78 38.5
Sabra01G0179800 Salix brachista HOM05D001835 ORTHO05D001899 5.4e-06 54.7 71 39.4
THA.LOC104821968 Tarenaya hassleriana HOM05D001835 ORTHO05D001899 5.4e-06 54.7 93 35.5
Thecc.03G026900 Theobroma cacao HOM05D001835 ORTHO05D001899 5.4e-06 54.7 72 37.5
TWI60G1275 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 5.4e-06 54.7 114 31.6
TAR374G1308 Trochodendron aralioides HOM05D001835 ORTHO05D001899 5.4e-06 54.7 78 38.5
MSTRG.811 Avicennia marina HOM05D001835 ORTHO05D001899 7.1e-06 54.3 92 34.8
BcaB03g12085 Brassica carinata HOM05D001835 ORTHO05D001899 7.1e-06 54.3 84 38.1
BcaC05g26648 Brassica carinata HOM05D001835 ORTHO05D001899 7.1e-06 54.3 84 38.1
BcaC06g35186 Brassica carinata HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
A07p12690 Brassica napus HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
A08p27140 Brassica napus HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
C07p18880 Brassica napus HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
BolC7t42399H Brassica oleracea HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
BraA07t29046Z Brassica rapa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
BraA08t34659Z Brassica rapa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
Cpa.g.sc1.234 Carica papaya HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
ClCG01G005760 Citrullus lanatus HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
ClCG05G023110 Citrullus lanatus HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
MELO3C012206.2 Cucumis melo HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
CsaV3_5G033880 Cucumis sativus L. HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
Eucgr.G02360 Eucalyptus grandis HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
FvH4_4g28240 Fragaria vesca HOM05D001835 ORTHO05D001899 7.1e-06 54.3 93 34.4
FAN07G2032 Fragaria x ananassa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 108 33.3
FAN12G3996 Fragaria x ananassa HOM05D001835 ORTHO05D001899 7.1e-06 54.3 93 34.4
Nn4g23689 Nelumbo nucifera HOM05D001835 ORTHO05D001899 7.1e-06 54.3 89 34.8
Prupe.5G013500 Prunus persica HOM05D001835 ORTHO05D001899 7.1e-06 54.3 79 35.4
Sed0006802 Sechium edule HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
Solyc08g075300.4 Solanum lycopersicum HOM05D001835 ORTHO05D001899 7.1e-06 54.3 78 37.2
vmacro00099 Vaccinium macrocarpon HOM05D001835 ORTHO05D001899 7.1e-06 54.3 86 33.7
Zm00001eb281450 Zea mays HOM05D001835 ORTHO05D001899 7.1e-06 54.3 97 35.1
AagrBONN_evm.TU.Sc2ySwM_362.1790 Anthoceros agrestis HOM05D001835 ORTHO05D001899 9.2e-06 53.9 52 50.0
AT5G45330 Arabidopsis thaliana HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 39.7
BcaB03g14054 Brassica carinata HOM05D001835 ORTHO05D001899 9.2e-06 53.9 89 34.8
BcaB07g30895 Brassica carinata HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 37.2
C02p46140 Brassica napus HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 38.5
BolC2t10671H Brassica oleracea HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 38.5
CARHR176750 Cardamine hirsuta HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 36.6
Duzib138G0091 Durio zibethinus HOM05D001835 ORTHO05D001899 9.2e-06 53.9 93 33.3
Thhalv10000836m.g Eutrema salsugineum HOM05D001835 ORTHO05D001899 9.2e-06 53.9 71 38.0
Peaxi162Scf00550g00444 Petunia axillaris HOM05D001835 ORTHO05D001899 9.2e-06 53.9 100 34.0
vmacro10569 Vaccinium macrocarpon HOM05D001835 ORTHO05D001899 9.2e-06 53.9 78 37.2


User provided reference genes

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