Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-262 909.4 449 100.0
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.1e-259 899.4 449 98.4
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.9e-251 872.1 449 96.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 9.6e-248 859.8 449 95.1
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 6.5e-228 793.9 463 86.4
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.2e-226 789.6 452 88.1
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 2.1e-226 788.9 462 85.9
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 6.1e-218 760.8 456 84.9
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.6e-216 755.4 463 83.6
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.8e-215 751.9 461 82.9
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 9.1e-214 746.9 458 83.0
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.2e-205 719.9 466 79.0
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 4.3e-179 631.7 461 70.9
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.3e-159 567.0 459 62.7
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 6.0e-157 558.1 462 62.6
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.5e-155 553.5 463 60.5
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 7.3e-155 551.2 451 61.4
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 6.2e-154 548.1 439 62.0
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 1.8e-153 546.6 465 60.2
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.4e-153 546.2 458 61.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 6.8e-153 544.7 462 60.2
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 8.9e-153 544.3 460 60.4
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 3.4e-152 542.3 453 62.3
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 3.8e-151 538.9 459 59.0
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 8.4e-151 537.7 458 60.0
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 8.4e-151 537.7 470 58.7
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.4e-150 536.2 473 59.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.4e-150 536.2 459 58.6
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 5.4e-150 535.0 466 59.0
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.6e-149 533.5 446 61.0
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 2.7e-149 532.7 459 58.8
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 2.7e-149 532.7 453 59.2
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 4.6e-149 531.9 459 58.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 6.0e-149 531.6 473 59.0
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.3e-148 530.4 470 57.2
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.7e-148 530.0 460 59.1
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 3.0e-148 529.3 463 59.6
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 5.1e-148 528.5 477 57.9
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 4.3e-147 525.4 474 57.2
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.6e-147 525.0 458 57.9
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 5.6e-147 525.0 457 58.6
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.2e-146 523.9 458 58.1
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.8e-146 522.7 464 57.5
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 6.2e-146 521.5 464 57.5
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.8e-145 520.0 461 57.5
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.4e-145 519.6 461 57.7
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 6.9e-145 518.1 464 57.1
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 6.9e-145 518.1 474 57.6
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 7.6e-144 514.6 478 58.2
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 6.4e-143 511.5 434 59.7
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.6e-141 506.9 455 56.7
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.6e-141 506.9 481 54.7
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 4.6e-141 505.4 481 54.7
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.0e-140 504.2 456 57.2
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.7e-140 503.4 462 57.6
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.9e-139 500.0 472 55.9
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.9e-139 500.0 484 53.9
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 3.3e-139 499.2 463 55.5
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 4.3e-139 498.8 470 56.4
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 4.3e-139 498.8 508 53.7
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 7.3e-139 498.0 498 53.8
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.1e-138 496.5 462 55.8
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 2.8e-138 496.1 434 58.8
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 4.8e-138 495.4 559 48.3
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.1e-138 494.6 454 56.8
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.8e-137 493.4 456 58.3
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 3.1e-137 492.7 469 55.7
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.0e-137 492.3 459 53.6
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.0e-137 492.3 461 56.2
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 5.3e-137 491.9 472 54.4
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 5.8e-136 488.4 366 67.8
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 5.8e-136 488.4 479 54.1
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 9.9e-136 487.6 432 57.9
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.8e-135 485.7 397 61.0
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 6.4e-135 485.0 468 53.4
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 2.4e-134 483.0 474 54.6
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 6.0e-133 478.4 481 53.8
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.9e-132 475.7 502 52.6
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.1e-130 469.9 456 54.4
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.8e-130 469.5 518 50.8
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.2e-128 464.2 389 60.9
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.9e-127 458.8 438 52.5
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 4.9e-127 458.8 439 61.3
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.4e-126 457.2 447 54.6
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 8.7e-124 448.0 478 51.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.9e-123 446.8 494 49.0
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.5e-123 446.4 471 51.8
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 7.4e-123 444.9 433 53.1
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 3.7e-122 442.6 473 50.3
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 3.8e-119 432.6 381 57.7
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.9e-116 422.5 327 64.8
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.6e-112 409.8 364 58.5
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 5.7e-107 392.1 468 48.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.2e-106 390.2 466 46.1
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 8.2e-106 388.3 446 48.9
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 9.1e-105 384.8 321 59.5
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 3.0e-100 369.8 425 47.8
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 7.7e-96 355.1 353 53.5
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 7.7e-96 355.1 353 53.5
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.0e-92 344.7 474 41.6
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 7.4e-91 338.6 338 51.2
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.7e-91 338.2 290 59.3
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 4.8e-90 335.9 294 57.8
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.1e-89 333.2 462 42.4
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 2.5e-78 297.0 349 45.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 9.1e-73 278.5 219 61.2
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.6e-72 277.7 142 93.7
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 5.9e-72 275.8 223 61.0
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 5.9e-72 275.8 500 35.6
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 5.7e-67 259.2 464 37.9
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 4.9e-66 256.1 160 86.2
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 4.9e-66 256.1 160 86.2
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.6e-64 251.1 349 42.1
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.7e-55 221.1 293 41.0
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.6e-53 214.5 181 61.3
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.7e-50 204.5 378 36.5
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.3e-50 202.2 223 49.8
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-44 184.9 223 48.0
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 7.6e-43 179.1 165 55.8
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 3.5e-40 170.2 447 30.2
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 8.6e-39 165.6 172 53.5
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.1e-36 158.7 155 54.8
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 1.9e-33 147.9 157 48.4
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 9.6e-30 135.6 112 61.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.4e-25 120.9 393 28.2
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.9e-23 113.6 116 52.6
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-17 94.0 105 49.5
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 6.2e-13 79.7 106 44.3
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 9.0e-12 75.9 67 56.7
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 9.0e-12 75.9 52 71.2
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.5e-11 75.1 52 71.2
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.8e-10 70.5 91 44.0


User provided reference genes

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