Anchorpoints

Gene id
VV15G05580
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G36340No description available.scaffold_7+View
AL6G41340No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G23450AtAIRP1 gene encodes a C3H2C3-type RING E3 Ub ligase. It has been shown to be a positive regulator in the Arabidopsis ABA-dependent drought response. RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G01890No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06330No description available.Bvchr1.sca001+View
BV5G07280No description available.Bvchr5.sca002+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00011G00320No description available.supercontig_11-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G16740No description available.scaffold_7-View
CRU_006G35650No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01170No description available.scaffold00009-View
CS00001G03330No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G01090No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G07590E3 ubiquitin-protein ligase At3g02290 (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G42991No description available.Gm01-View
GM18G46990No description available.Gm18-View
GM05G37620No description available.Gm05+View
GM16G03890No description available.Gm16+View
GM09G39300No description available.Gm09+View
GM07G07500No description available.Gm07+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G15980No description available.Chr01+View
GR07G10120No description available.Chr07-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03581G01580No description available.scaffold03581+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G030510anaphase-promoting complex subunit 11 RING-H2 finger proteinchr8+View
MT8G098665anaphase-promoting complex subunit 11 RING-H2 finger proteinchr8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G11220No description available.scaffold_5-View
PPE_002G16870No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G12990No description available.Chr03-View
PT02G16150No description available.Chr02-View
PT14G08700No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G04140No description available.30190-View
RC30174G03090No description available.30174-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094840RING finger protein 13 (AHRD V1 *-*- RNF13_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01-View
SL08G081300Ring finger protein 126 (AHRD V1 *-*- Q28DW8_XENTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G029120E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr08+View
ST01G032230RING finger protein 44 (AHRD V1 *--- RNF44_HUMAN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G35360No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G00590similar to AT5G41350|zinc finger (C3HC4-type RING finger) family proteinch7-1+View
TP7G21350similar to AT4G23450|zinc finger (C3HC4-type RING finger) family proteinch7-4-View


Download

Gene id
Species
Description
Chromosome
Strand