Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G12180No description available.scaffold_4-View
AL1G25750No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G27940RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: leaf apex, root, carpel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 9623 Blast hits to 9595 proteins in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2405; Fungi - 805; Plants - 5009; Viruses - 51; Other Eukaryotes - 1353 (source: NCBI BLink). RING/U-box superfamily protein2+View
AT1G23980RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G40250.1); Has 9283 Blast hits to 9263 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2141; Fungi - 689; Plants - 5036; Viruses - 72; Other Eukaryotes - 1339 (source: NCBI BLink).1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00118G00190No description available.CM3.5_scaffold00118-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G22470No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G02850No description available.scaffold00003-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G38500RING-H2 finger protein ATL5I (putative)scf0513124+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G19735No description available.Gm11+View
GM12G08785No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G14700No description available.Chr03+View
GR09G08920No description available.Chr09+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G006280No description available.13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08316G00650No description available.scaffold08316-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G056590zinc finger C C3HC4 type (RING finger) proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G26770No description available.scaffold_1-View
PPE_007G14520No description available.scaffold_7-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29589G00560No description available.29589-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G012680Ring H2 finger protein (AHRD V1 ***- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr11-View
ST05G028540Ring finger protein (AHRD V1 *-*- D7FY13_ECTSI); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr05+View
ST11G024330Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-typechr11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G24600No description available.scaffold_2-View
TC0009G29190No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G10760similar to AT2G27940|zinc finger (C3HC4-type RING finger) family proteinch4-6+View
TP1G21260similar to AT1G23980|zinc finger (C3HC4-type RING finger) family proteinch1-1-View


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Gene id
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Description
Chromosome
Strand