Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G28560No description available.scaffold_5+View
AL4G29160No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G58040seven in absentia of Arabidopsis 2 (SINAT2); FUNCTIONS IN: protein binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has 1862 Blast hits to 1847 proteins in 701 species: Archae - 0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). seven in absentia of Arabidopsis 2 Encodes a RING finger domain containing protein that interacts with AtRAP2.2.3+View
AT2G41980Protein with RING/U-box and TRAF-like domains Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: seven in absentia of Arabidopsis 2 (TAIR:AT3G58040.1); Has 1924 Blast hits to 1907 proteins in 703 species: Archae - 0; Bacteria - 0; Metazoa - 1315; Fungi - 12; Plants - 485; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G38440No description available.A09+View
BR04G25150No description available.A04-View
BR04G02440No description available.A04-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00085G00500No description available.supercontig_85-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G23510No description available.scaffold_5+View
CRU_004G23460No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00018G02000No description available.scaffold00018-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G20780No description available.scaffold_1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G33170No description available.Gm19+View
GM03G30250No description available.Gm03+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G005060No description available.12-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G054335ubiquitin ligase SINAT3chr1+View
MT7G093600ubiquitin ligase SINAT3chr7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G09400No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G19860No description available.Chr03-View
PT06G19410No description available.Chr06-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G022310no datachr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G17640No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G04680similar to AT3G58040|SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)ch5-1-View
TP4G24250similar to AT2G41980|seven in absentia (SINA) family proteinch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G09000name=GSVIVG01033473001;chr8+View


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Gene id
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Description
Chromosome
Strand