Gene: SL10G080570 (Solanum lycopersicum)

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Gene Identifier
SL10G080570
Transcript Identifier
SL10G080570.1
Gene Type
Coding gene
Location
ch10 : 61131100-61132920 : positive

Family

Gene family
HOM03D000207
(498 genes in 31 species)
specific family

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Descriptions

Description
E3 ubiquitin-protein ligase sina (AHRD V1 **-- B0WR23_CULQU)%3B contains Interpro domain(s) IPR004162 Seven in absentia protein
Description (AnnoMine)
Putative E3 ubiquitin-protein ligase SINAT1

Identifiers

Identifier Name
pidSolyc10g080570.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IEAGenome Projectprotein ubiquitination
GO:0006511IEAInterProubiquitin-dependent protein catabolic process
GO:0007275IEAInterPromulticellular organismal development
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03D000207
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000207
GO:0032502IEAPLAZA Homologydevelopmental processHOM03D000207
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03D000207
GO:0032501IEAPLAZA Homologymulticellular organismal processHOM03D000207
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03D000207
GO:0006508IEAPLAZA HomologyproteolysisHOM03D000207
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03D000207
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000207
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03D000207
GO:0070647IEAPLAZA Homologyprotein modification by small protein conjugation or removalHOM03D000207
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000207
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000207
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000207
GO:0044767IEAPLAZA Homologysingle-organism developmental processHOM03D000207
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03D000207
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000207
GO:0032446IEAPLAZA Homologyprotein modification by small protein conjugationHOM03D000207
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000207
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000207
GO:0044707IEAPLAZA Homologysingle-multicellular organism processHOM03D000207
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03D000207
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000207
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000207
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000207

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAInterProprotein binding
GO:0004842IEAInterProubiquitin-protein ligase activity
GO:0016874IEAPLAZA Homologyligase activityHOM03D000207
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000207
GO:0019787IEAPLAZA Homologysmall conjugating protein ligase activityHOM03D000207
GO:0016881IEAPLAZA Homologyacid-amino acid ligase activityHOM03D000207
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000207

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000207
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000207

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008974TRAF-like
IPR013323SIAH-type domain
IPR013010Zinc finger, SIAH-type
IPR001841Zinc finger, RING-type
IPR018121Seven-in-absentia protein, TRAF-like domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR004162E3 ubiquitin-protein ligase SINA like

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.