Anchorpoints
- Gene id
- CRU_007G08870
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G10410 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G31160 | Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development. DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). DDB1-CUL4 associated factor 1 | 4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G15550 | No description available. | A08 | - | View |
BR03G52150 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G14310 | No description available. | Bvchr2.sca006 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G18460 | No description available. | Chr5 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM01596G03660 | No description available. | CM3.5_scaffold01596 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00148G00110 | No description available. | supercontig_148 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00025G00090 | No description available. | scaffold00025 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G30800 | No description available. | scaffold_3 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G29630 | Protein VPRBP (VprBP) (probable) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM14G16791 | No description available. | Gm14 | - | View |
GM06G07880 | No description available. | Gm06 | - | View |
GM04G07810 | No description available. | Gm04 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD08G013800 | No description available. | 8 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G108470 | DDB1- and CUL4-associated factor-like protein | chr3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G46710 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G28020 | No description available. | Chr06 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC28226G00470 | No description available. | 28226 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G074370 | DDB1- and CUL4-associated factor homolog 1 (AHRD V1 **-- DCAF1_ARATH)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C region | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G017580 | DDB1- and CUL4-associated factor homolog 1 (AHRD V1 *--- DCAF1_ARATH); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr08 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G00120 | No description available. | scaffold_9 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G29040 | similar to AT4G31160|DCAF1 (DDB1-CUL4 ASSOCIATED FACTOR 1) | ch7-5 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G09920 | name=GSVIVG01035587001; | chr4 | - | View |