Gene: AT4G31160 (Arabidopsis thaliana)

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Gene Identifier
AT4G31160
Transcript Identifier
AT4G31160.1
Gene Type
Coding gene
Location
4 : 15145936-15152939 : positive

Family

Gene family
HOM03D004016
(47 genes in 31 species)
specific family
Subfamily
ORTHO03D002942
(39 genes in 30 species)
specific family

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Descriptions

Description
DDB1-CUL4 associated factor 1
Curated Summary
Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.
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Identifiers

Identifier Name
aliasDCAF1
aliasDDB1-CUL4 associated factor 1
uniprotQ9M086

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793IMP, RCA, UniProtembryo development ending in seed dormancy1 2 3 4 5 6
GO:0009908IMPUniProtflower development1 2 3 4 5
GO:0010154IMPGene Ontologyfruit development1
GO:0048366IMP, RCA, UniProtleaf development1 2 3 4 5 6
GO:0048367IMPGene Ontologyshoot system development1
GO:0048827IMPGene Ontologyphyllome development1
GO:0007062RCAGene Ontologysister chromatid cohesion1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009845RCAGene Ontologyseed germination1
GO:0009880RCAGene Ontologyembryonic pattern specification1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009933RCAGene Ontologymeristem structural organization1
GO:0010072RCAGene Ontologyprimary shoot apical meristem specification1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010182RCAGene Ontologysugar mediated signaling pathway1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010431RCAGene Ontologyseed maturation1
GO:0010564RCAGene Ontologyregulation of cell cycle process1
GO:0016567IEA, RCAUniProtprotein ubiquitination1 2 3 4 5
GO:0019915RCAGene Ontologylipid storage1
GO:0045595RCAGene Ontologyregulation of cell differentiation1
GO:0048825RCAGene Ontologycotyledon development1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0051301RCAGene Ontologycell division1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166ISSGene Ontologynucleotide binding1
GO:0005515IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6
GO:0080008IPIUniProtCul4-RING ubiquitin ligase complex1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013720LisH dimerisation motif, subgroup
IPR017986WD40-repeat-containing domain
IPR006594LisH dimerisation motif
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.